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IVF0021128 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021128
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr08:31133520..31133892
RNA-Seq ExpressionIVF0021128
SyntenyIVF0021128
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034865.1 retrotransposon protein [Cucumis melo var. makuwa]4.31e-39100Show/hide
Query:  TLEQAIFALRRIIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGG
        TLEQAIFALRRIIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGG
Subjt:  TLEQAIFALRRIIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGG

KAA0050379.1 retrotransposon protein [Cucumis melo var. makuwa]1.10e-1876.79Show/hide
Query:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMG
        VFGKDRATG  AETF DI SNVPTDND VP EDD+D +F A+ S RMNMSPEDMMG
Subjt:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMG

KAA0064184.1 retrotransposon protein [Cucumis melo var. makuwa]1.51e-2182.76Show/hide
Query:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR
        VFGKDRATGACAETFADI SNV TDNDSVP ED I+MEFPAM   RMNMSP+DMM GR
Subjt:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR

TYJ98397.1 retrotransposon protein [Cucumis melo var. makuwa]2.26e-1870.49Show/hide
Query:  IIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR
        ++ VF KDRATG  A+TFADI  NVP DNDSVP+ED IDMEF AM S RMN+S E MMGGR
Subjt:  IIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR

TYK02844.1 retrotransposon protein [Cucumis melo var. makuwa]2.06e-2282.76Show/hide
Query:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR
        VFGKDRATGACAETFADI SNV TDNDSVP ED I+MEFPAM   RMNMSP+DMM GR
Subjt:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR

TrEMBL top hitse value%identityAlignment
A0A5A7T069 Retrotransposon protein3.9e-31100Show/hide
Query:  TLEQAIFALRRIIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGG
        TLEQAIFALRRIIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGG
Subjt:  TLEQAIFALRRIIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGG

A0A5A7UA62 Retrotransposon protein1.3e-1376.79Show/hide
Query:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMG
        VFGKDRATG  AETF DI SNVPTDND VP EDD+D +F A+ S RMNMSPEDMMG
Subjt:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMG

A0A5A7UI55 Retrotransposon protein1.6e-1377.78Show/hide
Query:  KDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGG
        KDRAT ACAETFA+I SN+P DNDSVP ED +DM+FP M+S RMNMSPEDMMGG
Subjt:  KDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGG

A0A5A7VAC3 Retrotransposon protein4.2e-1782.76Show/hide
Query:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR
        VFGKDRATGACAETFADI SNV TDNDSVP ED I+MEFPAM   RMNMSP+DMM GR
Subjt:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR

A0A5D3BUJ4 Retrotransposon protein4.2e-1782.76Show/hide
Query:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR
        VFGKDRATGACAETFADI SNV TDNDSVP ED I+MEFPAM   RMNMSP+DMM GR
Subjt:  VFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACGTCAAGTGCATCATCGCCGAGAGGGACGTGTTTGATCATTGGGTCCGGGACTCTTGAACAAGCCATTTTCGCATTACGACGCATTATCGTCGTGTTTGGGAA
AGATCGAGCGACGGGGGCCTGTGCGGAGACCTTTGCAGACATTGGTTCGAACGTACCGACAGACAACGATAGTGTCCCCATAGAGGATGACATCGATATGGAATTCCCCG
CTATGTACAGCCTGAGGATGAACATGTCCCCTGAGGACATGATGGGCGGTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGACGTCAAGTGCATCATCGCCGAGAGGGACGTGTTTGATCATTGGGTCCGGGACTCTTGAACAAGCCATTTTCGCATTACGACGCATTATCGTCGTGTTTGGGAA
AGATCGAGCGACGGGGGCCTGTGCGGAGACCTTTGCAGACATTGGTTCGAACGTACCGACAGACAACGATAGTGTCCCCATAGAGGATGACATCGATATGGAATTCCCCG
CTATGTACAGCCTGAGGATGAACATGTCCCCTGAGGACATGATGGGCGGTAGATAA
Protein sequenceShow/hide protein sequence
MMTSSASSPRGTCLIIGSGTLEQAIFALRRIIVVFGKDRATGACAETFADIGSNVPTDNDSVPIEDDIDMEFPAMYSLRMNMSPEDMMGGR