CuGenDBv2

Gene ID	IVF0021188
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	cytochrome c oxidase-assembly factor COX23, mitochondrial
Genome location	tig00000135:67937..69928
RNA-Seq Expression	IVF0021188
Synteny	IVF0021188
Gene Ontology terms	NA
InterPro domains	IPR009069 - Cysteine alpha-hairpin motif superfamily IPR010625 - CHCH

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0049122.1 cytochrome c oxidase-assembly factor COX23 [Cucumis melo var. makuwa]

1.13e-42

100

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

XP_004133972.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucumis sativus]

1.55e-40

95.89

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP PPY SAARISDSPCYPQYSASLKCLEV+SSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

XP_022147041.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Momordica charantia]

1.75e-37

90.41

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MAST+RD APPYASAARISDSPCYPQYSASLKCLE +SSEK+KCQEHFDVYKECKKKEREARLERN+ RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

XP_022924627.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita moschata]

8.64e-38

90.41

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP+PPY SAARISDSPC+PQYSASLKCLE +SSE+SKCQEHFDVYKECKKKEREARLERNK RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

XP_038906947.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Benincasa hispida]

1.05e-38

91.78

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLE ++SEKSKC+EHFDVYKECKKKEREARLERN+ RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4K5 CHCH domain-containing protein

1.0e-29

95.89

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP PPY SAARISDSPCYPQYSASLKCLEV+SSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

A0A5A7U004 Cytochrome c oxidase-assembly factor COX23

2.4e-31

100

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

A0A6J1D157 cytochrome c oxidase-assembly factor COX23, mitochondrial

2.1e-27

90.41

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MAST+RD APPYASAARISDSPCYPQYSASLKCLE +SSEK+KCQEHFDVYKECKKKEREARLERN+ RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

A0A6J1E9H8 cytochrome c oxidase-assembly factor COX23, mitochondrial

1.2e-27

90.41

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP+PPY SAARISDSPC+PQYSASLKCLE +SSE+SKCQEHFDVYKECKKKEREARLERNK RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

A0A6J1ITM4 cytochrome c oxidase-assembly factor COX23, mitochondrial

3.0e-26

89.04

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Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP PPY SAARISDSPC+ QYSASLKCLE +SSE+SKCQEHFDVYKECKKKEREARLERNK RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

SwissProt top hits

e value

%identity

Alignment

P38824 Cytochrome c oxidase-assembly factor COX23, mitochondrial

5.3e-04

51.22

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Query:  PCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREAR
        PC      S +CLE N  ++SKCQE+FD Y+ECKK+   AR
Subjt:  PCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREAR

Q6FQX5 Cytochrome c oxidase-assembly factor COX23, mitochondrial

2.4e-04

48.78

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Query:  PCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREAR
        PC      S KCLE+N  ++ +C+E+FD Y+ECKK+  EAR
Subjt:  PCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREAR

Arabidopsis top hits

e value

%identity

Alignment

AT1G02160.1 Cox19 family protein (CHCH motif)

1.4e-23

78.57

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Query:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        +++  A  Y SAARISDSPCY QYSASLKCLE   S+KSKCQ+HFDVYKECKKKEREARLERNKTRS FS
Subjt:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

AT1G02160.2 Cox19 family protein (CHCH motif)

3.6e-16

74.55

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Query:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKE
        +++  A  Y SAARISDSPCY QYSASLKCLE   S+KSKCQ+HFDVYKECKKKE
Subjt:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKE

Sequences

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CDS sequence

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ATGGCTTCCACTTCTAGGGATCCAGCTCCGCCCTACGCCAGTGCTGCTAGAATTTCCGATTCTCCTTGCTATCCTCAGTACAGCGCTTCCCTCAAATGTCTTGAGGTAAA
TAGCTCAGAGAAGAGCAAATGTCAAGAACATTTCGATGTTTACAAGGAATGCAAGAAGAAAGAGCGGGAAGCTCGGTTGGAACGCAACAAGACACGGTCTTTCTTCTCAT
GA

mRNA sequence

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Protein sequence

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MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEVNSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

IVF0021188 (gene) of Melon (IVF77) v1 genome