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IVF0021212 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021212
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTIM-barrel signal transduction protein isoform 1
Genome locationchr07:8777218..8778206
RNA-Seq ExpressionIVF0021212
SyntenyIVF0021212
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR009215 - TIM-barrel domain, IGPS-like
IPR013785 - Aldolase-type TIM barrel
IPR015813 - Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily
IPR044122 - UPF0261 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032386.1 TIM-barrel signal transduction protein isoform 1 [Cucumis melo var. makuwa]2.79e-3752.66Show/hide
Query:  VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK-----------------------------------------------------
        VKVYPYHINDPEFAEELVNSFLEITPKDTDSCG KLVLAETSQDLRK                                                     
Subjt:  VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK-----------------------------------------------------

Query:  ----------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSIFYVPADSQS
                               G+F MAGRGSLAGLLPF DANAIVLEMANEVLPVSSIFYVPADSQS
Subjt:  ----------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSIFYVPADSQS

KAA0064154.1 UPF0261 protein y4oU [Cucumis melo var. makuwa]1.28e-5052.4Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDMV------------------------------------------------------------------------
        MACDSSRFDAIIEKRIPLVLSVGAVDMV                                                                        
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDMV------------------------------------------------------------------------

Query:  ------------------------KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMAN
                                KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMAN
Subjt:  ------------------------KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMAN

Query:  EVLPVSSI
        EVLP S++
Subjt:  EVLPVSSI

TYK12597.1 UPF0261 protein [Cucumis melo var. makuwa]4.24e-3337.14Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDMV------------------------------------------------------------------------
        MACDS+RFDAIIEKRIPLVLSVGAVDMV                                                                        
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDMV------------------------------------------------------------------------

Query:  ------------------------KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK------------------------------
                                KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDL+K                              
Subjt:  ------------------------KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK------------------------------

Query:  ---------------------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
                                                      G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Subjt:  ---------------------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV

TYK16007.1 UPF0261 protein BPP1817-like protein [Cucumis melo var. makuwa]1.86e-5459.24Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDMV------------------------------------------------------------------------
        MACDSSRFDAIIEKRIPLVLSVGAVDMV                                                                        
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDMV------------------------------------------------------------------------

Query:  KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSI
        KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLP S++
Subjt:  KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSI

XP_038882761.1 toMV susceptible protein tm-1(GCR26) isoform X2 [Benincasa hispida]8.47e-3439.45Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDMV------------------------------------------------------------------------
        MACDSSRFDAIIEKRIPLVLS+GA+DMV                                                                        
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDMV------------------------------------------------------------------------

Query:  ------------------------KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK------------------------------
                                KVYPYHINDPEFAE LVNSFLEIT KDTDSCGPKLVLAETSQDL K                              
Subjt:  ------------------------KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK------------------------------

Query:  ---------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
                              G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Subjt:  ---------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV

TrEMBL top hitse value%identityAlignment
A0A0A0KGJ3 Uncharacterized protein5.7e-3041.22Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------VKVYPYHINDPE
        MACDS+RFDAIIEK+IPLVLSVGAVDM                                                             VKVYPYHINDPE
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------VKVYPYHINDPE

Query:  FAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK-----------------------------------------------------------------
        FAE LVNSFLEIT KDTDSCGPKLVLAETS+DLRK                                                                 
Subjt:  FAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK-----------------------------------------------------------------

Query:  ----------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
                   G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Subjt:  ----------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV

A0A5A7SQS0 TIM-barrel signal transduction protein isoform 16.7e-3152.66Show/hide
Query:  VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK-----------------------------------------------------
        VKVYPYHINDPEFAEELVNSFLEITPKDTDSCG KLVLAETSQDLRK                                                     
Subjt:  VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK-----------------------------------------------------

Query:  ----------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSIFYVPADSQS
                               G+F MAGRGSLAGLLPF DANAIVLEMANEVLPVSSIFYVPADSQS
Subjt:  ----------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSIFYVPADSQS

A0A5A7VA93 UPF0261 protein y4oU1.9e-4152.4Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------
        MACDSSRFDAIIEKRIPLVLSVGAVDM                                                                         
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------

Query:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMAN
                               VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMAN
Subjt:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMAN

Query:  EVLPVSSI
        EVLP S++
Subjt:  EVLPVSSI

A0A5D3CKY2 UPF0261 protein5.3e-2837.14Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------
        MACDS+RFDAIIEKRIPLVLSVGAVDM                                                                         
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------

Query:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK------------------------------
                               VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDL+K                              
Subjt:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK------------------------------

Query:  ---------------------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
                                                      G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Subjt:  ---------------------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV

A0A5D3CVR2 UPF0261 protein BPP1817-like protein3.1e-4459.24Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDM------------------------------------------------------------------------V
        MACDSSRFDAIIEKRIPLVLSVGAVDM                                                                        V
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDM------------------------------------------------------------------------V

Query:  KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSI
        KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLP S++
Subjt:  KVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSI

SwissProt top hitse value%identityAlignment
A7M6E7 ToMV resistance protein Tm-1(GCR237)6.5e-1529.29Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------
        MACDSSRFDAI+EK+IPLVLSVGA+DM                                                                         
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------

Query:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPKDT-------------------------DSCGPK-----------------
                               VKV PYHIND EFA  LV+SFLEI+PK                            SC  K                 
Subjt:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPKDT-------------------------DSCGPK-----------------

Query:  ---LVLAETSQDLRK------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
           ++L +    + K                               G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Subjt:  ---LVLAETSQDLRK------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV

A7M6E8 ToMV susceptible protein tm-1(GCR26)1.7e-1529.64Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------
        MACDSSRFDAI+EK+IPLVLSVGA+DM                                                                         
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------

Query:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPKD-------------------------TDSCGPK-----------------
                               VKVYPYHIND EFA  LV+SFLE++PK                            SC  K                 
Subjt:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPKD-------------------------TDSCGPK-----------------

Query:  --LVLAETSQD-------------------------------LRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
          +V+ +  +D                               L   G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Subjt:  --LVLAETSQD-------------------------------LRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV

P55607 Uncharacterized protein y4oV4.7e-0567.65Show/hide
Query:  GQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
        G++ MAGRGSLAGLL + +AN IV++MA+EVLPV
Subjt:  GQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV

Arabidopsis top hitse value%identityAlignment
AT5G66420.1 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).2.5e-1428.42Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------
        MACDSSRFD  IEK IPLVLSVGA+DM                                                                         
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------

Query:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPK--------DTDSCGP-----------------------------------
                               V +Y +HINDPEFAE LV SFLEI PK        +T S  P                                   
Subjt:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPK--------DTDSCGP-----------------------------------

Query:  KLVLAETSQDLRK------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
        + +L      + K                               G+F MAGRGSLAGLLPFADANA+VLEMANEVLPV
Subjt:  KLVLAETSQDLRK------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV

AT5G66420.2 LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 1232 Blast hits to 1230 proteins in 311 species: Archae - 18; Bacteria - 959; Metazoa - 1; Fungi - 84; Plants - 42; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).2.5e-1428.42Show/hide
Query:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------
        MACDSSRFD  IEK IPLVLSVGA+DM                                                                         
Subjt:  MACDSSRFDAIIEKRIPLVLSVGAVDM-------------------------------------------------------------------------

Query:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPK--------DTDSCGP-----------------------------------
                               V +Y +HINDPEFAE LV SFLEI PK        +T S  P                                   
Subjt:  -----------------------VKVYPYHINDPEFAEELVNSFLEITPK--------DTDSCGP-----------------------------------

Query:  KLVLAETSQDLRK------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV
        + +L      + K                               G+F MAGRGSLAGLLPFADANA+VLEMANEVLPV
Subjt:  KLVLAETSQDLRK------------------------------MGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTGACAGTTCCCGCTTTGATGCCATTATAGAGAAGAGGATCCCATTAGTTCTAAGTGTAGGAGCAGTGGATATGGTGAAGGTATATCCTTATCATATTAATGA
TCCTGAGTTCGCTGAGGAATTGGTTAACTCATTCTTGGAAATTACTCCAAAAGATACGGACTCGTGTGGCCCAAAACTTGTTTTAGCTGAAACTAGTCAAGACCTTCGAA
AGATGGGGCAGTTTTGCATGGCTGGAAGGGGTTCTTTAGCAGGTTTGCTACCTTTTGCCGATGCTAATGCCATAGTGCTTGAAATGGCCAATGAAGTATTGCCTGTAAGT
TCTATCTTCTATGTACCTGCTGATTCACAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTGACAGTTCCCGCTTTGATGCCATTATAGAGAAGAGGATCCCATTAGTTCTAAGTGTAGGAGCAGTGGATATGGTGAAGGTATATCCTTATCATATTAATGA
TCCTGAGTTCGCTGAGGAATTGGTTAACTCATTCTTGGAAATTACTCCAAAAGATACGGACTCGTGTGGCCCAAAACTTGTTTTAGCTGAAACTAGTCAAGACCTTCGAA
AGATGGGGCAGTTTTGCATGGCTGGAAGGGGTTCTTTAGCAGGTTTGCTACCTTTTGCCGATGCTAATGCCATAGTGCTTGAAATGGCCAATGAAGTATTGCCTGTAAGT
TCTATCTTCTATGTACCTGCTGATTCACAAAGTTAA
Protein sequenceShow/hide protein sequence
MACDSSRFDAIIEKRIPLVLSVGAVDMVKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVS
SIFYVPADSQS