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IVF0021242 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021242
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr03:15328560..15328778
RNA-Seq ExpressionIVF0021242
SyntenyIVF0021242
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033818.1 hypothetical protein E6C27_scaffold1735G00130 [Cucumis melo var. makuwa]1.93e-0662.5Show/hide
Query:  RSTTAMNRSLEAFDDRLRFNAMESDWASAEG---GAHAGGWRREPERK
        RSTT   RSLE  DDRLRFNA+ESDWASA+      H G W RE ER+
Subjt:  RSTTAMNRSLEAFDDRLRFNAMESDWASAEG---GAHAGGWRREPERK
KAA0037851.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.29e-0454.1Show/hide
Query:  QRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE--GGAHAGGWR-REPERK
        Q ET    + DLRRS T   R LE FDDRL FNA E +WAS +  G    GG R RE ERK
Subjt:  QRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE--GGAHAGGWR-REPERK
KAA0039625.1 pol protein [Cucumis melo var. makuwa]2.43e-0662Show/hide
Query:  ARVGSGLQRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE
        A +GSG Q ETG   +  LRRSTT   R LE  DDRLRFN  ESDWASA+
Subjt:  ARVGSGLQRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE
KAA0047842.1 gag/pol protein [Cucumis melo var. makuwa]3.64e-0765.12Show/hide
Query:  QRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE
        Q ETG   + DLRRST    R LE FDDRLRFNA +SDWASA+
Subjt:  QRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE
KAA0060052.1 gag/pol protein [Cucumis melo var. makuwa]1.98e-0458.33Show/hide
Query:  VGSGLQRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE
        +GSG Q ETG   +  LRRSTT     LE  DDRLRFNA E DWAS +
Subjt:  VGSGLQRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE
TrEMBL top hitse value%identityAlignment
A0A5A7ST75 Uncharacterized protein7.1e-0462Show/hide
Query:  LRRSTTAMNRSLEAFDDRLRFNAMESDWASAE---GGAHAGGWRREPERK
        L RSTT   RSLE  DDRLRFNA+ESDWASA+      H G W RE ER+
Subjt:  LRRSTTAMNRSLEAFDDRLRFNAMESDWASAE---GGAHAGGWRREPERK
A0A5A7TDW4 Pol protein7.1e-0452.86Show/hide
Query:  ARVGSGLQRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE---GGAHAGGWRREPERKSE
        A +GSG Q ETG   +  LRRSTT   R LE  DDRLRFN  ESDWASA+      H     RE ER+ E
Subjt:  ARVGSGLQRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE---GGAHAGGWRREPERKSE
A0A5A7TWG3 Gag/pol protein1.9e-0465.12Show/hide
Query:  QRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE
        Q ETG   + DLRRST    R LE FDDRLRFNA +SDWASA+
Subjt:  QRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTCGGCTAGCTCGGGTCGGGTCGGGTTTGCAGCGCGAAACGGGGCAACCACGAGCGACGGATCTCCGACGTTCGACGACCGCGATGAATCGCAGCTTGGAGGC
GTTCGACGACCGGCTCCGCTTCAACGCGATGGAGAGCGACTGGGCGTCGGCGGAAGGAGGGGCGCACGCCGGTGGCTGGCGTCGTGAGCCCGAGAGGAAATCAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTCGGCTAGCTCGGGTCGGGTCGGGTTTGCAGCGCGAAACGGGGCAACCACGAGCGACGGATCTCCGACGTTCGACGACCGCGATGAATCGCAGCTTGGAGGC
GTTCGACGACCGGCTCCGCTTCAACGCGATGGAGAGCGACTGGGCGTCGGCGGAAGGAGGGGCGCACGCCGGTGGCTGGCGTCGTGAGCCCGAGAGGAAATCAGAATAG
Protein sequenceShow/hide protein sequence
MVARLARVGSGLQRETGQPRATDLRRSTTAMNRSLEAFDDRLRFNAMESDWASAEGGAHAGGWRREPERKSE