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IVF0021255 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021255
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr02:7860037..7860672
RNA-Seq ExpressionIVF0021255
SyntenyIVF0021255
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040440.1 lectin receptor kinase [Cucumis melo var. makuwa]8.77e-1040.62Show/hide
Query:  VEDLALIIEVSKDKNVVDIKNKKEDKD------------KDMVGETQQEVVDMATQDQDMINQTLNIIIFKS--------LLDTETSNHMREVKRMFVEL
        VE+L  II+ +KD NVV+I++++EDKD                GETQ++VVD ATQDQ+    TL +    S         LDT  +N+M  V+ M VEL
Subjt:  VEDLALIIEVSKDKNVVDIKNKKEDKD------------KDMVGETQQEVVDMATQDQDMINQTLNIIIFKS--------LLDTETSNHMREVKRMFVEL

Query:  DESISGTVAFGD-CQVKINTYQSMYRQG
        DES+S  VAFGD  +V++    +  +QG
Subjt:  DESISGTVAFGD-CQVKINTYQSMYRQG

KAA0047179.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.48e-0665.22Show/hide
Query:  MINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVGET
        MIN SSYELILLV+ L  IIEV+K +N+VDIK+++ED+ KDM+G T
Subjt:  MINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVGET

XP_006574020.1 uncharacterized protein LOC102660714 [Glycine max]9.32e-0635.82Show/hide
Query:  MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSK-----DKNVVD-IKNKKEDKDKDMVGETQQEVVDMATQDQDMINQTLNIIIF
        M++E+L GSLQAYE+K K+++K   I    +++ L  ++ +   E S+      KN V+ + N  E KDK        E+V +A +  +   +       
Subjt:  MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSK-----DKNVVD-IKNKKEDKDKDMVGETQQEVVDMATQDQDMINQTLNIIIF

Query:  KSLLDTETSNHMREVKRMFVELDESISGTVAFGD
           LDT  SNHM   + MFV+LDES+SG V+FGD
Subjt:  KSLLDTETSNHMREVKRMFVELDESISGTVAFGD

XP_010909942.1 uncharacterized protein LOC105035927 [Elaeis guineensis]1.63e-0431.34Show/hide
Query:  MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVGETQQEVVDMATQDQDMINQTLNIIIFKSLLDT
        M  EQL+GSLQA+E+K  ++ +E  I     E I  V  + ++ E  K ++ + I +K+       V ETQ+  +     ++D +           +L+ 
Subjt:  MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVGETQQEVVDMATQDQDMINQTLNIIIFKSLLDT

Query:  E--TSNHMREVKRMFVELDESISGTVAFGDCQVK
        E   SNHM  +K M  E+DES  G+V FGD  ++
Subjt:  E--TSNHMREVKRMFVELDESISGTVAFGDCQVK

XP_010943412.1 uncharacterized protein LOC105061152 [Elaeis guineensis]8.69e-0632.09Show/hide
Query:  MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVG------ETQQEVVDMATQDQDMINQTLNIIIF
        M +++LMGSLQA+E++  +RR+E +             +  L  +VS  KN  D KN++  + ++         E   EV+ +A ++ D   Q +     
Subjt:  MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVG------ETQQEVVDMATQDQDMINQTLNIIIF

Query:  KSLLDTETSNHMREVKRMFVELDESISGTVAFGD
           LDT  SNHM   K MF+  DES++G ++FGD
Subjt:  KSLLDTETSNHMREVKRMFVELDESISGTVAFGD

TrEMBL top hitse value%identityAlignment
A0A5A7U120 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-0460Show/hide
Query:  MINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVGETQQEV
        MIN SSYELILLV+ L  IIEV+K +N+VDIK+++ED+ KDM+G T + +
Subjt:  MINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVGETQQEV

A0A5D3DZJ9 Lectin receptor kinase1.3e-0740.62Show/hide
Query:  VEDLALIIEVSKDKNVVDIKNKKEDKD------------KDMVGETQQEVVDMATQDQDMINQTLNIIIFKS--------LLDTETSNHMREVKRMFVEL
        VE+L  II+ +KD NVV+I++++EDKD                GETQ++VVD ATQDQ+    TL +    S         LDT  +N+M  V+ M VEL
Subjt:  VEDLALIIEVSKDKNVVDIKNKKEDKD------------KDMVGETQQEVVDMATQDQDMINQTLNIIIFKS--------LLDTETSNHMREVKRMFVEL

Query:  DESISGTVAFGD-CQVKINTYQSMYRQG
        DES+S  VAFGD  +V++    +  +QG
Subjt:  DESISGTVAFGD-CQVKINTYQSMYRQG

A0A6I9SII2 uncharacterized protein LOC1050611522.9e-0432.09Show/hide
Query:  MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMV------GETQQEVVDMATQDQDMINQTLNIIIF
        M +++LMGSLQA+E++  +RR+E +             +  L  +VS  KN  D KN++  + ++         E   EV+ +A ++ D   Q +     
Subjt:  MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMV------GETQQEVVDMATQDQDMINQTLNIIIF

Query:  KSLLDTETSNHMREVKRMFVELDESISGTVAFGD
           LDT  SNHM   K MF+  DES++G ++FGD
Subjt:  KSLLDTETSNHMREVKRMFVELDESISGTVAFGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTTGAGCAACTCATGGGTTCGTTACAAGCATATGAAAAGAAAAGAAAAAGAAGAAGAAAGGAATCGATGATCAATTTCTCAAGTTATGAGTTGATTTTACTAGT
GGAAGACTTAGCCTTAATAATAGAAGTGAGCAAAGACAAGAACGTGGTGGACATCAAGAACAAGAAAGAGGACAAGGACAAAGACATGGTTGGAGAAACTCAACAAGAGG
TTGTGGATATGGCAACTCAAGATCAAGATATGATAAATCAAACATTAAATATTATAATTTTCAAAAGTCTTTTGGATACCGAGACAAGCAACCACATGCGTGAAGTAAAA
AGAATGTTCGTGGAGCTTGATGAATCAATAAGTGGCACTGTAGCATTTGGCGATTGTCAAGTGAAAATCAATACGTATCAAAGCATGTATAGGCAAGGTCATTACAATCA
AGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTTGAGCAACTCATGGGTTCGTTACAAGCATATGAAAAGAAAAGAAAAAGAAGAAGAAAGGAATCGATGATCAATTTCTCAAGTTATGAGTTGATTTTACTAGT
GGAAGACTTAGCCTTAATAATAGAAGTGAGCAAAGACAAGAACGTGGTGGACATCAAGAACAAGAAAGAGGACAAGGACAAAGACATGGTTGGAGAAACTCAACAAGAGG
TTGTGGATATGGCAACTCAAGATCAAGATATGATAAATCAAACATTAAATATTATAATTTTCAAAAGTCTTTTGGATACCGAGACAAGCAACCACATGCGTGAAGTAAAA
AGAATGTTCGTGGAGCTTGATGAATCAATAAGTGGCACTGTAGCATTTGGCGATTGTCAAGTGAAAATCAATACGTATCAAAGCATGTATAGGCAAGGTCATTACAATCA
AGCATAA
Protein sequenceShow/hide protein sequence
MIVEQLMGSLQAYEKKRKRRRKESMINFSSYELILLVEDLALIIEVSKDKNVVDIKNKKEDKDKDMVGETQQEVVDMATQDQDMINQTLNIIIFKSLLDTETSNHMREVK
RMFVELDESISGTVAFGDCQVKINTYQSMYRQGHYNQA