; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0021268 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021268
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:23696538..23697302
RNA-Seq ExpressionIVF0021268
SyntenyIVF0021268
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]5.79e-169100Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
        DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP
        ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP
Subjt:  ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]5.43e-11190.64Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        MASPEDL ASENSKTPIGAT MS CPLVTKASPQRVGGT+PITT EISHFC DNLISDLR+KTAITL ESLRQKII TPFERVSSL+PEMRKIFAAIATS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
         SNNLTFLKE+VDGYFQGVENHNQMRSSILLQSTKDAQLME KGFVKTLR+D+NRIL+ETS VQRRLARLSAKEAKLEAKLK VRTESTKLSG+ISKNEI
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELK
        ELK
Subjt:  ELK

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]1.08e-16599.21Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKII TPFERVSSLKPEMRKIFAAIATS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
        DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP
        ELKQKQREISKTCEEIDKLKCALIIGDADAKML ALRESLENTLEELKNLKWTP
Subjt:  ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP

TYK22840.1 uncharacterized protein E5676_scaffold115G00220 [Cucumis melo var. makuwa]1.20e-9977.03Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        M SPE L  SENSK PIGATAMS  PLV KASPQRV G KPIT  EISHFC DNLISDL+RKT ITL ESLRQKII T FERVS+L+ EM KIF AI TS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
         SN+L FL+ELV GYFQGVENHNQM SSILLQSTKDAQLM+ KGFV+ LRLDEN IL++TS VQR LA+LSAKEAKLE KLKVV  ES KL G+IS+NE+
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELKQKQREISKTCEEIDKLKCA
        +LKQKQ EISKTCEEIDKL+CA
Subjt:  ELKQKQREISKTCEEIDKLKCA

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]6.16e-11176.13Show/hide
Query:  NSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATSDSNNLTFLKEL
        NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKII TPFER+SSL+PEM KIF AIATS S+NL  L+EL
Subjt:  NSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATSDSNNLTFLKEL

Query:  VDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEIELKQKQREISK
        V+GYFQGVENHNQ+ SS LLQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLSAKEAKLEAKLK+VR ES KLSG+I KN++ELKQKQ EISK
Subjt:  VDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEIELKQKQREISK

Query:  TCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP
        TCEEIDKL+CA I+GD DAKMLS LRESLE+TLEELKN KWTP
Subjt:  TCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP

TrEMBL top hitse value%identityAlignment
A0A5A7SJ85 Uncharacterized protein2.4e-131100Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
        DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP
        ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP
Subjt:  ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP

A0A5A7SJR1 Uncharacterized protein2.4e-7876.58Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        M SPE L  SEN K PIGATAMS  PLV KASPQRV G KPIT  EISHFC DNLISDL+RKT ITL ESLRQKII T FERVS+L+ EM KIF AI TS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
         SN+L FL+ELV GYFQGVENHNQM SSILLQSTKDAQLM+ KGFV+ LRLDEN IL++TS VQR LA+LSAKEAKLE KLKVV  ES KL G+IS+NE+
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELKQKQREISKTCEEIDKLKCA
        +LKQKQ EISKTCEEIDKL+CA
Subjt:  ELKQKQREISKTCEEIDKLKCA

A0A5A7U4C3 Uncharacterized protein1.6e-9090.64Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        MASPEDL ASENSKTPIGAT MS CPLVTKASPQRVGGT+PITT EISHFC DNLISDLR+KTAITL ESLRQKII TPFERVSSL+PEMRKIFAAIATS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
         SNNLTFLKE+VDGYFQGVENHNQMRSSILLQSTKDAQLME KGFVKTLR+D+NRIL+ETS VQRRLARLSAKEAKLEAKLK VRTESTKLSG+ISKNEI
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELK
        ELK
Subjt:  ELK

A0A5D3C453 Uncharacterized protein3.0e-12999.21Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKII TPFERVSSLKPEMRKIFAAIATS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
        DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP
        ELKQKQREISKTCEEIDKLKCALIIGDADAKML ALRESLENTLEELKNLKWTP
Subjt:  ELKQKQREISKTCEEIDKLKCALIIGDADAKMLSALRESLENTLEELKNLKWTP

A0A5D3DHK0 Uncharacterized protein4.8e-7977.03Show/hide
Query:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS
        M SPE L  SENSK PIGATAMS  PLV KASPQRV G KPIT  EISHFC DNLISDL+RKT ITL ESLRQKII T FERVS+L+ EM KIF AI TS
Subjt:  MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATS

Query:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI
         SN+L FL+ELV GYFQGVENHNQM SSILLQSTKDAQLM+ KGFV+ LRLDEN IL++TS VQR LA+LSAKEAKLE KLKVV  ES KL G+IS+NE+
Subjt:  DSNNLTFLKELVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEI

Query:  ELKQKQREISKTCEEIDKLKCA
        +LKQKQ EISKTCEEIDKL+CA
Subjt:  ELKQKQREISKTCEEIDKLKCA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCCCAGAAGACCTTTATGCAAGTGAAAACTCTAAAACGCCTATAGGTGCAACTGCTATGTCGATCTGTCCTCTTGTGACCAAGGCGTCCCCTCAACGAGTAGG
AGGAACGAAGCCTATCACAACTTTTGAGATTTCTCATTTTTGTGTGGACAACTTAATTTCTGATCTCCGACGAAAAACTGCCATAACTTTGTCGGAAAGCTTACGACAGA
AGATCATTTGTACCCCTTTTGAGCGAGTAAGTAGTCTTAAACCAGAAATGCGTAAGATCTTTGCTGCAATTGCGACTAGTGACAGCAACAACCTTACCTTTTTAAAAGAA
CTTGTGGATGGTTACTTTCAAGGTGTAGAGAACCATAATCAAATGCGTTCCTCAATTTTGCTCCAGTCAACGAAGGATGCTCAATTAATGGAGACAAAAGGTTTTGTGAA
GACTTTGCGACTTGATGAGAACCGTATATTGAAGGAGACAAGTACTGTCCAACGCCGCCTTGCACGACTATCTGCCAAAGAGGCTAAACTAGAAGCAAAACTAAAAGTGG
TGCGGACAGAGTCCACCAAACTTTCTGGCATGATTTCTAAAAATGAGATAGAGCTGAAGCAGAAGCAACGTGAGATTTCAAAGACTTGCGAGGAAATTGACAAACTTAAA
TGTGCCCTCATCATTGGAGATGCTGATGCAAAAATGTTGTCGGCACTCCGTGAATCTTTAGAAAACACATTAGAAGAGCTTAAGAACCTTAAATGGACCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCCCAGAAGACCTTTATGCAAGTGAAAACTCTAAAACGCCTATAGGTGCAACTGCTATGTCGATCTGTCCTCTTGTGACCAAGGCGTCCCCTCAACGAGTAGG
AGGAACGAAGCCTATCACAACTTTTGAGATTTCTCATTTTTGTGTGGACAACTTAATTTCTGATCTCCGACGAAAAACTGCCATAACTTTGTCGGAAAGCTTACGACAGA
AGATCATTTGTACCCCTTTTGAGCGAGTAAGTAGTCTTAAACCAGAAATGCGTAAGATCTTTGCTGCAATTGCGACTAGTGACAGCAACAACCTTACCTTTTTAAAAGAA
CTTGTGGATGGTTACTTTCAAGGTGTAGAGAACCATAATCAAATGCGTTCCTCAATTTTGCTCCAGTCAACGAAGGATGCTCAATTAATGGAGACAAAAGGTTTTGTGAA
GACTTTGCGACTTGATGAGAACCGTATATTGAAGGAGACAAGTACTGTCCAACGCCGCCTTGCACGACTATCTGCCAAAGAGGCTAAACTAGAAGCAAAACTAAAAGTGG
TGCGGACAGAGTCCACCAAACTTTCTGGCATGATTTCTAAAAATGAGATAGAGCTGAAGCAGAAGCAACGTGAGATTTCAAAGACTTGCGAGGAAATTGACAAACTTAAA
TGTGCCCTCATCATTGGAGATGCTGATGCAAAAATGTTGTCGGCACTCCGTGAATCTTTAGAAAACACATTAGAAGAGCTTAAGAACCTTAAATGGACCCCTTGA
Protein sequenceShow/hide protein sequence
MASPEDLYASENSKTPIGATAMSICPLVTKASPQRVGGTKPITTFEISHFCVDNLISDLRRKTAITLSESLRQKIICTPFERVSSLKPEMRKIFAAIATSDSNNLTFLKE
LVDGYFQGVENHNQMRSSILLQSTKDAQLMETKGFVKTLRLDENRILKETSTVQRRLARLSAKEAKLEAKLKVVRTESTKLSGMISKNEIELKQKQREISKTCEEIDKLK
CALIIGDADAKMLSALRESLENTLEELKNLKWTP