CuGenDBv2

Gene ID	IVF0021273
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	pentatricopeptide repeat-containing protein At2g30100, chloroplastic
Genome location	chr11:20075630..20078784
RNA-Seq Expression	IVF0021273
Synteny	IVF0021273
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0067325.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]

1.08e-288

100

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Query:  MVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVF
        MVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVF
Subjt:  MVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVF

Query:  EWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPS
        EWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPS
Subjt:  EWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPS

Query:  GYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSS
        GYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSS
Subjt:  GYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSS

Query:  SIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKM
        SIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKM
Subjt:  SIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKM

Query:  I
        I
Subjt:  I

KAG7010495.1 Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

5.06e-282

88.12

Show/hide

Query:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRL---------YMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE
        MICAQGF+PLTQFGFSFSLSS L+++R GFS P+L         +MVS I+CN+Q+STFSVSRA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE
Subjt:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRL---------YMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE

Query:  LERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFS
        LERMTR+PSDVLEEMNDRLSARE QLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWI KLVEG+HNVGDVVDLLVDMDCVGLKPHFS
Subjt:  LERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFS

Query:  MIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK
        MIEKVISLYW+MGEKEKAI FVKEVLGR L FMKD+WEGHKGGPSGYLAWKMMVDGDYRGAVKMVL+LRESGL+PEVY YLIAMTAVVKELNEFAKALRK
Subjt:  MIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK

Query:  LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEI
        LKSYARDG VAELDK+NVELV +YQ+ELLADGVRLSNWVL+EG SS HGVVHERLLAMYICAGQG+EAERQLWEMKL+GKEADADLYDIVLAICASQKE 
Subjt:  LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEI

Query:  KAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        +AM RLLTRIEITSP +KKKSLTWLLRGYIKGGHFRDAA T+VKM+
Subjt:  KAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

XP_008465268.1 PREDICTED: pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucumis melo]

0.0

100

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Query:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS
        MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS
Subjt:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS

Query:  DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY
        DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY
Subjt:  DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY

Query:  WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY
        WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY
Subjt:  WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY

Query:  VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR
        VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR
Subjt:  VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR

Query:  IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
Subjt:  IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

XP_011657120.1 pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucumis sativus]

3.98e-309

97.48

Show/hide

Query:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS
        MICAQGFTPLTQFGFSFSLSSPLE+QR GFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS
Subjt:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS

Query:  DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY
        DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWI KLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY
Subjt:  DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY

Query:  WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY
        WEMGEKEKA+FFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLK YARDG+
Subjt:  WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY

Query:  VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR
        VAELDKNNVELVAKYQTELLADGV+LSNWVLEEGSSSI GVVHERLLAMYICAGQGVEAERQLWEMKL+GKEADADLYDIVLAICASQKE KAMKRLLTR
Subjt:  VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR

Query:  IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGT+VKMI
Subjt:  IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

XP_038901728.1 pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Benincasa hispida]

5.76e-295

92.6

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Query:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLY---------MVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE
        M+CAQGFTPLTQFGFSFSLSS L+T R+GFSTP+LY         MVS ISCNYQDSTFSVSRA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE
Subjt:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLY---------MVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE

Query:  LERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFS
        LERMTREPSDVLEEMNDRLSARE QLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWI KLVEG+HNVGDVVDLLVDMDCVGLKPHFS
Subjt:  LERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFS

Query:  MIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK
        MIEKVISLYWEMGEKEKAI FVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGL+PEVY YLIAMTAVVKELNEFAKALRK
Subjt:  MIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK

Query:  LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEI
        LKSYARDG VAELDKNNVELV KYQTELLADGVRLSNWVLEEGS SIHGVVHERLLAMYICAGQG+EAERQLWEMKL+GKEADADLYDIVLAICASQKE 
Subjt:  LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEI

Query:  KAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        KAMKRLLTRIEITSPM KKKSLTWLLRGYIKGGHF DAA T+VKMI
Subjt:  KAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KC35 Uncharacterized protein

4.9e-244

97.48

Show/hide

Query:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS
        MICAQGFTPLTQFGFSFSLSSPLE+QR GFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS
Subjt:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS

Query:  DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY
        DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWI KLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY
Subjt:  DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY

Query:  WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY
        WEMGEKEKA+FFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLK YARDG+
Subjt:  WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY

Query:  VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR
        VAELDKNNVELVAKYQTELLADGV+LSNWVLEEGSSSI GVVHERLLAMYICAGQGVEAERQLWEMKL+GKEADADLYDIVLAICASQKE KAMKRLLTR
Subjt:  VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR

Query:  IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGT+VKMI
Subjt:  IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

A0A1S3CNE0 pentatricopeptide repeat-containing protein At2g30100, chloroplastic

5.9e-250

100

Show/hide

Query:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS
        MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS
Subjt:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPS

Query:  DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY
        DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY
Subjt:  DVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLY

Query:  WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY
        WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY
Subjt:  WEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGY

Query:  VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR
        VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR
Subjt:  VAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTR

Query:  IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
Subjt:  IEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

A0A5A7VNN8 Pentatricopeptide repeat-containing protein

8.4e-228

100

Show/hide

Query:  MVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVF
        MVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVF
Subjt:  MVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVF

Query:  EWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPS
        EWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPS
Subjt:  EWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPS

Query:  GYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSS
        GYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSS
Subjt:  GYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSS

Query:  SIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKM
        SIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKM
Subjt:  SIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKM

Query:  I
        I
Subjt:  I

A0A6J1FYE9 pentatricopeptide repeat-containing protein At2g30100, chloroplastic

4.7e-223

88.12

Show/hide

Query:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRL---------YMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE
        MICAQGFTPLTQFGFSFSLSS L+++R GFS P+L         +MVS I+CN+Q+STFSVSRA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE
Subjt:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRL---------YMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE

Query:  LERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFS
        LERMTR+PSDVLEEMNDRLSARE QLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWI KLVEG+HNV DVVDLLVDMDCVGLKPHFS
Subjt:  LERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFS

Query:  MIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK
        MIEKVISLYW+MGEKEKAI FVKEVLGR L FMKD+WEGHKGGPSGYLAWKMMVDGDYRGAVKMVL+LRESGL+PEVY YLIAMTAVVKELNEFAKALRK
Subjt:  MIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK

Query:  LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEI
        LKSYARDG VAELDK+NVELV +YQ+ELLADGVRLSNWVL+EG SS HGVVHERLLAMYICAGQG+EAERQLWEMKL+GKEADADLYDIVLAICASQKE 
Subjt:  LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEI

Query:  KAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        +AM RLLTRIEITSP +KKKSLTWLLRGYIKGGHFRDAA T+VKM+
Subjt:  KAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

A0A6J1JH85 pentatricopeptide repeat-containing protein At2g30100, chloroplastic

9.0e-222

87.44

Show/hide

Query:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRL---------YMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE
        MICA GFTPLT+FGFSFSLSS L+++R GFS P+L         ++VS I+CN+Q+STFSVSRA KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE
Subjt:  MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRL---------YMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEE

Query:  LERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFS
        LERMTR+PSDVLEEMNDRLSARE QLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWI KLVEG+HNVGDVVDLLVDMDCVGLKPHFS
Subjt:  LERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFS

Query:  MIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK
        MIEKVISLYW+MGEKEKAI FVKEVLGR L FMKD+WEGHKGGPSGYLAWKMMVDGDYRGAVKMVL+LRESGL+PEVY +LIAMTAVVKELNEFAKALRK
Subjt:  MIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK

Query:  LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEI
        LKSYARDG VAELDK+NVELV +YQ+ELLADGVRLSNWVL+EGSSS HGVVHERLLAMYICAGQG+EAERQLWEMKL+GKEADADLYDIVLAICASQKE 
Subjt:  LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEI

Query:  KAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        +AM RLL+RIEITSP +KKKSLTWLLRGYIKGGHFRDAA T+VKM+
Subjt:  KAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

SwissProt top hits

e value

%identity

Alignment

Q0WNN7 Pentatricopeptide repeat-containing protein At2g30100, chloroplastic

4.5e-146

66.24

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Query:  AAKFRDLRLFKSVELDQFITSDDE----DEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETM
        A KFR++ L +SVELDQFITS++E    +E+G+GFFEAIEELERMTREPSD+LEEMN RLS+RE+QL+LVYF+QEGRDSWC LEVFEWL+KENRVD+E M
Subjt:  AAKFRDLRLFKSVELDQFITSDDE----DEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETM

Query:  ELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKD-----DWEGHKGGPSGYLAWKMMV
        ELMVSIMC W+ KL+E   N   V DLL++MDCVGLKP FSM++KVI+LY EMG+KE A+ FVKEVL R   F          EG KGGP GYLAWK MV
Subjt:  ELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKD-----DWEGHKGGPSGYLAWKMMV

Query:  DGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEG--SSSIHGVVH
        DGDYR AV MV+ LR SGL+PE YSYLIAMTA+VKELN   K LR+LK +AR G+VAE+D ++  L+ KYQ+E L+ G++L+ W +EEG  + SI GVVH
Subjt:  DGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEG--SSSIHGVVH

Query:  ERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        ERLLAMYICAG+G EAE+QLW+MKL G+E +ADL+DIV+AICASQKE+ A+ RLLTR+E      KKK+L+WLLRGY+KGGHF +AA T+V MI
Subjt:  ERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

Arabidopsis top hits

e value

%identity

Alignment

AT1G10910.1 Pentatricopeptide repeat (PPR) superfamily protein

1.4e-04

18.24

Show/hide

Query:  AIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCAL-EVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGL
        AI E++R +   S  L+ +   L  +++ ++L  F   GR  W  L ++FEW+Q+  ++   T    +  +         G  NV   +++   +     
Subjt:  AIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCAL-EVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGL

Query:  KPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFA
        K +  +   ++S                                            ++ +G     +K+   ++  GL+P+V +Y   +   +K  N + 
Subjt:  KPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFA

Query:  KALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICA
        KA+           + EL  N +++                             V++  +LA+    G+  EAE  + +MK+ G   +   Y  +L   +
Subjt:  KALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICA

Query:  SQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHF
         + + K    L+T ++    +  K  +T LL+ YIKGG F
Subjt:  SQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHF

AT2G30100.1 pentatricopeptide (PPR) repeat-containing protein

3.2e-147

66.24

Show/hide

Query:  AAKFRDLRLFKSVELDQFITSDDE----DEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETM
        A KFR++ L +SVELDQFITS++E    +E+G+GFFEAIEELERMTREPSD+LEEMN RLS+RE+QL+LVYF+QEGRDSWC LEVFEWL+KENRVD+E M
Subjt:  AAKFRDLRLFKSVELDQFITSDDE----DEMGDGFFEAIEELERMTREPSDVLEEMNDRLSAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETM

Query:  ELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKD-----DWEGHKGGPSGYLAWKMMV
        ELMVSIMC W+ KL+E   N   V DLL++MDCVGLKP FSM++KVI+LY EMG+KE A+ FVKEVL R   F          EG KGGP GYLAWK MV
Subjt:  ELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKD-----DWEGHKGGPSGYLAWKMMV

Query:  DGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEG--SSSIHGVVH
        DGDYR AV MV+ LR SGL+PE YSYLIAMTA+VKELN   K LR+LK +AR G+VAE+D ++  L+ KYQ+E L+ G++L+ W +EEG  + SI GVVH
Subjt:  DGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEG--SSSIHGVVH

Query:  ERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI
        ERLLAMYICAG+G EAE+QLW+MKL G+E +ADL+DIV+AICASQKE+ A+ RLLTR+E      KKK+L+WLLRGY+KGGHF +AA T+V MI
Subjt:  ERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATTTGTGCCCAGGGCTTTACTCCCTTAACCCAATTTGGGTTTTCATTTTCTTTGTCTTCTCCATTGGAAACTCAGAGATATGGGTTTTCTACTCCCCGATTGTATAT
GGTTTCTCCTATTTCTTGCAATTACCAGGATTCTACTTTCTCTGTTTCCCGAGCTGCTAAGTTTCGGGATTTAAGGTTGTTCAAATCGGTTGAGTTGGACCAGTTCATCA
CCAGTGATGATGAAGATGAAATGGGAGATGGGTTTTTTGAGGCAATTGAGGAATTGGAACGGATGACGAGGGAACCATCGGATGTTCTTGAAGAAATGAACGACCGCCTT
TCGGCTAGGGAAATTCAGCTTGTGTTGGTGTACTTCTCTCAAGAAGGTAGAGATTCATGGTGTGCTCTTGAGGTTTTTGAGTGGCTTCAAAAGGAAAATCGGGTTGATAA
GGAGACCATGGAGCTGATGGTGTCTATAATGTGTAGTTGGATCAATAAGTTGGTGGAGGGAAGACATAATGTTGGAGATGTTGTTGACCTTCTTGTGGATATGGATTGTG
TTGGCTTGAAACCTCATTTTAGCATGATAGAAAAGGTTATCTCTTTGTACTGGGAAATGGGTGAGAAGGAAAAAGCGATTTTCTTTGTGAAAGAGGTTTTGGGACGCAAT
CTTGCTTTTATGAAGGATGATTGGGAGGGGCATAAAGGAGGACCGAGCGGTTATCTCGCATGGAAGATGATGGTTGATGGTGACTACAGAGGTGCAGTGAAAATGGTGCT
GCATCTTAGAGAATCTGGGTTAAGGCCAGAGGTTTACTCCTATCTTATCGCCATGACTGCTGTGGTTAAAGAGCTGAATGAATTTGCAAAAGCTCTTCGGAAACTCAAAA
GCTATGCAAGAGACGGGTACGTGGCTGAACTTGATAAAAACAATGTTGAACTTGTTGCGAAGTATCAGACAGAGCTTCTAGCTGATGGTGTACGGTTATCCAACTGGGTG
CTTGAAGAGGGAAGCTCTTCAATTCATGGGGTGGTTCACGAGAGACTCCTTGCAATGTACATTTGTGCTGGGCAAGGAGTCGAGGCAGAGAGACAGCTTTGGGAAATGAA
GCTTTTAGGCAAGGAGGCCGATGCTGATCTCTACGATATCGTGCTAGCCATTTGTGCTTCACAGAAGGAGATAAAAGCAATGAAACGGTTGCTTACAAGGATCGAGATTA
CGAGTCCCATGATTAAGAAAAAGAGTTTGACATGGCTGCTTAGGGGTTACATCAAAGGAGGGCATTTCCGTGATGCTGCAGGAACAGTAGTAAAAATGATCATTTGGGTT
TTCTCCCAGAGTACTTGGACAGAGTAG

mRNA sequence

Show/hide mRNA sequence

AAAACCTTTGTCTTGCAGTGGCGGCAAAAACGCTGCCATTGCGACCACTCACTCCGACCTCCCACCCTCCCTCACCCATCCCTCAATTCTTCCCCGCAACATTAGGGTTT
CTTTTCTTTTCCGATCATCAAATTCACTTCAATTCAATCCAATTCACCCCTTCTTCAACCCCTTTCTCGCTGTCTCTCTCTATTCTTCTCTCTTCTCTCTTCCGCTTTTC
GTTTCTTTCTTTGTTCCTGTTTTTAACTGCTTCAAATTGCTCTCCTAATTGATGCGCTGGAAACCCTAATCTTCATTTCTTTAGTTTGAATTTTAGTGGTTTGGATTAAA
ACTTTGAAATGATTTGTGCCCAGGGCTTTACTCCCTTAACCCAATTTGGGTTTTCATTTTCTTTGTCTTCTCCATTGGAAACTCAGAGATATGGGTTTTCTACTCCCCGA
TTGTATATGGTTTCTCCTATTTCTTGCAATTACCAGGATTCTACTTTCTCTGTTTCCCGAGCTGCTAAGTTTCGGGATTTAAGGTTGTTCAAATCGGTTGAGTTGGACCA
GTTCATCACCAGTGATGATGAAGATGAAATGGGAGATGGGTTTTTTGAGGCAATTGAGGAATTGGAACGGATGACGAGGGAACCATCGGATGTTCTTGAAGAAATGAACG
ACCGCCTTTCGGCTAGGGAAATTCAGCTTGTGTTGGTGTACTTCTCTCAAGAAGGTAGAGATTCATGGTGTGCTCTTGAGGTTTTTGAGTGGCTTCAAAAGGAAAATCGG
GTTGATAAGGAGACCATGGAGCTGATGGTGTCTATAATGTGTAGTTGGATCAATAAGTTGGTGGAGGGAAGACATAATGTTGGAGATGTTGTTGACCTTCTTGTGGATAT
GGATTGTGTTGGCTTGAAACCTCATTTTAGCATGATAGAAAAGGTTATCTCTTTGTACTGGGAAATGGGTGAGAAGGAAAAAGCGATTTTCTTTGTGAAAGAGGTTTTGG
GACGCAATCTTGCTTTTATGAAGGATGATTGGGAGGGGCATAAAGGAGGACCGAGCGGTTATCTCGCATGGAAGATGATGGTTGATGGTGACTACAGAGGTGCAGTGAAA
ATGGTGCTGCATCTTAGAGAATCTGGGTTAAGGCCAGAGGTTTACTCCTATCTTATCGCCATGACTGCTGTGGTTAAAGAGCTGAATGAATTTGCAAAAGCTCTTCGGAA
ACTCAAAAGCTATGCAAGAGACGGGTACGTGGCTGAACTTGATAAAAACAATGTTGAACTTGTTGCGAAGTATCAGACAGAGCTTCTAGCTGATGGTGTACGGTTATCCA
ACTGGGTGCTTGAAGAGGGAAGCTCTTCAATTCATGGGGTGGTTCACGAGAGACTCCTTGCAATGTACATTTGTGCTGGGCAAGGAGTCGAGGCAGAGAGACAGCTTTGG
GAAATGAAGCTTTTAGGCAAGGAGGCCGATGCTGATCTCTACGATATCGTGCTAGCCATTTGTGCTTCACAGAAGGAGATAAAAGCAATGAAACGGTTGCTTACAAGGAT
CGAGATTACGAGTCCCATGATTAAGAAAAAGAGTTTGACATGGCTGCTTAGGGGTTACATCAAAGGAGGGCATTTCCGTGATGCTGCAGGAACAGTAGTAAAAATGATCA
TTTGGGTTTTCTCCCAGAGTACTTGGACAGAGTAGCTGTACTGCAAGGACTAAGAAAAGGAATTCGTGAGCCAGAAATTGTTCATACGTACCTCGATCTCTGCAAGTGTC
TTTCCGATGCCAATCTAATTGGACCTAGTCTTGTATATTTGCACTTACAGAAACACAAGCTTTGGATCATTAAAATGCTTTGAAGAAACTCCTCAATACCTACCTCTTTG
CACAGGCAGCTAATAAAAGTGGAGCAAAAACCATATTCATATCATACAGCACCAGCTCTTTTTAGGTGCTTTTACATGTTGATTTTGTATATTTTGAGGCTCTGTAAGCT
GTCCCTGAAGAGGAATACTTGTATATATATAAATATACATATATGAGCCGCGAGCGTGCACAGAGAACCAATGTTTCAATGTATAGATTGTATAAAGAAATTACATATTC
TGATATTTTTTAGTGTACA

Protein sequence

Show/hide protein sequence

MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSPISCNYQDSTFSVSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRL
SAREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNVGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRN
LAFMKDDWEGHKGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRKLKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWV
LEEGSSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKKSLTWLLRGYIKGGHFRDAAGTVVKMIIWV
FSQSTWTE

IVF0021273 (gene) of Melon (IVF77) v1 genome