CuGenDBv2

Gene ID	IVF0021292
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ARM repeat superfamily protein isoform 2
Genome location	chr11:12749608..12750547
RNA-Seq Expression	IVF0021292
Synteny	IVF0021292
Gene Ontology terms	GO:0006338 - chromatin remodeling (biological process) GO:0005737 - cytoplasm (cellular component) GO:0070209 - ASTRA complex (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0051117.1 ARM repeat superfamily protein isoform 2 [Cucumis melo var. makuwa]

4.62e-68

73.94

Show/hide

Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

XP_008447113.1 PREDICTED: uncharacterized protein LOC103489639 isoform X2 [Cucumis melo]

4.09e-67

73.33

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Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLN HVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

XP_008447114.1 PREDICTED: uncharacterized protein LOC103489639 isoform X3 [Cucumis melo]

3.33e-67

73.33

Show/hide

Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLN HVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

XP_011659038.1 uncharacterized protein LOC101212708 isoform X1 [Cucumis sativus]

4.81e-68

73.94

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Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

XP_011659039.1 uncharacterized protein LOC101212708 isoform X2 [Cucumis sativus]

2.61e-68

73.94

Show/hide

Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPP-MLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K906 Uncharacterized protein

2.8e-59

73.94

Show/hide

Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

A0A1S3BG40 uncharacterized protein LOC103489639 isoform X2

2.4e-58

73.33

Show/hide

Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLN HVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

A0A1S3BGN4 uncharacterized protein LOC103489639 isoform X3

2.4e-58

73.33

Show/hide

Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLN HVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

A0A1S3BHI6 uncharacterized protein LOC103489639 isoform X1

2.4e-58

73.33

Show/hide

Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLN HVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

A0A5D3BCU4 ARM repeat superfamily protein isoform 2

2.8e-59

73.94

Show/hide

Query:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR
        M SAGEDDISLHFFRDTAMLHQVIIEGIGIFS+CLGKYFSSCGFLHSSLY  L  L     ++ +    + +        P    L   NADYVIDSICR
Subjt:  MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEA-PPMLSYTFFFFIWLPNGSELGFGNADYVIDSICR

Query:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVS ELEIL RHQHPNLTGPFLK  +E+
Subjt:  QLRHLDLNPHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

SwissProt top hits

e value

%identity

Alignment

Q91V83 TELO2-interacting protein 1 homolog

7.3e-04

30.71

Show/hide

Query:  IEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPPMLSYTFFFFIWLPNGSELGFG--------NADYVIDSICRQLRHLDLNPHVPNVLAA
        +EGIG F+  LGK F     L S+LY       P + K   P +L         +      G+         N+DY+++ I   LRHL L+PH P VL A
Subjt:  IEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPPMLSYTFFFFIWLPNGSELGFG--------NADYVIDSICRQLRHLDLNPHVPNVLAA

Query:  ILSYIGIAHEILPLLEEPMHKVSLELE
        +L     +  +LPL+ + +  V   L+
Subjt:  ILSYIGIAHEILPLLEEPMHKVSLELE

Arabidopsis top hits

e value

%identity

Alignment

AT1G79190.1 ARM repeat superfamily protein

7.6e-49

64.33

Show/hide

Query:  ISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKL-EAPPMLSYTFFFFIWLPNGSELGFGNADYVIDSICRQLRHLDLN
        ISLHF RD+AMLHQVIIEG+G+FS+CLGK F+S GFLHSSLY  L  L     ++  A   +          P    L   NADYVIDSICRQLRHLDLN
Subjt:  ISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKL-EAPPMLSYTFFFFIWLPNGSELGFGNADYVIDSICRQLRHLDLN

Query:  PHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL
        PHVPNVLAA+LSYIG+AH+ILPLLEEPM  VS ELEI+ R QHPNLT PFLK   E+
Subjt:  PHVPNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSEL

Sequences

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CDS sequence

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ATGCCTTCTGCTGGTGAAGATGACATTAGCTTACACTTTTTCAGAGACACTGCTATGTTGCATCAGGTTATAATTGAAGGAATAGGTATTTTTAGTATATGTCTGGGAAA
GTATTTTTCTTCTTGTGGATTTCTTCATTCATCACTTTATTGCTGCTTGAGAATCTTATTTCCTCAAATGGGGAAGTTAGAAGCACCTCCGATGCTATCTTACACGTTTT
TCTTCTTCATCTGGCTACCCAACGGTTCGGAACTTGGTTTTGGAAATGCAGATTATGTGATTGATTCAATTTGTAGGCAGTTGCGTCATTTGGATCTCAATCCGCACGTG
CCAAATGTTCTTGCCGCTATTCTTTCCTATATTGGAATAGCTCATGAGATTTTGCCTCTACTGGAGGAACCCATGCATAAAGTATCATTGGAACTTGAGATTCTTAGAAG
ACATCAGCACCCTAATCTAACTGGTCCATTCTTAAAGGTCACTTCTGAATTATGCATATCCACTTTGTGCTAA

mRNA sequence

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Protein sequence

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MPSAGEDDISLHFFRDTAMLHQVIIEGIGIFSICLGKYFSSCGFLHSSLYCCLRILFPQMGKLEAPPMLSYTFFFFIWLPNGSELGFGNADYVIDSICRQLRHLDLNPHV
PNVLAAILSYIGIAHEILPLLEEPMHKVSLELEILRRHQHPNLTGPFLKVTSELCISTLC

IVF0021292 (gene) of Melon (IVF77) v1 genome