; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0021305 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021305
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr06:15910611..15910763
RNA-Seq ExpressionIVF0021305
SyntenyIVF0021305
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]6.83e-0867.57Show/hide
Query:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTER
        M N  KE+FGD+L+L +IT IIC+PK EQVWV GTER
Subjt:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTER
KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]4.00e-0958.33Show/hide
Query:  NVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK
        N  +EEFGD LH  +IT IIC P+  QVW +G ERL  L EKFY  YK
Subjt:  NVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK
KAA0062632.1 uncharacterized protein E6C27_scaffold79G001430 [Cucumis melo var. makuwa]1.27e-0765.79Show/hide
Query:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERL
        M NVRKEEF +KLHL + T IIC PK  QVW +G ERL
Subjt:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERL
TYJ98051.1 LINE-1 reverse transcriptase isogeny [Cucumis melo var. makuwa]6.90e-0764.86Show/hide
Query:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTER
        M NVRKEEF +KLHL + T IIC PK  QVW +G ER
Subjt:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTER
TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]8.96e-1468Show/hide
Query:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK
        M N  KEEF   LH+ EIT I C+PK EQVWVL  ERL PLKEK+YKSYK
Subjt:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK
TrEMBL top hitse value%identityAlignment
A0A5A7V332 Uncharacterized protein1.3e-0465.79Show/hide
Query:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERL
        M NVRKEEF +KLHL + T IIC PK  QVW +G ERL
Subjt:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERL
A0A5D3BHD0 LINE-1 reverse transcriptase isogeny3.8e-0464.86Show/hide
Query:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTER
        M NVRKEEF +KLHL + T IIC PK  QVW +G ER
Subjt:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTER
A0A5D3C951 Uncharacterized protein1.0e-0968Show/hide
Query:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK
        M N  KEEF   LH+ EIT I C+PK EQVWVL  ERL PLKEK+YKSYK
Subjt:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK
A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein1.2e-0558.33Show/hide
Query:  NVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK
        N  +EEFGD LH  +IT IIC P+  QVW +G ERL  L EKFY  YK
Subjt:  NVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK
A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein3.4e-0567.57Show/hide
Query:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTER
        M N  KE+FGD+L+L +IT IIC+PK EQVWV GTER
Subjt:  MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTER
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAACGTGCGTAAGGAGGAGTTTGGAGACAAACTCCACCTTGTCGAGATAACTTTCATCATTTGTATCCCGAAAGAAGAACAAGTGTGGGTTTTAGGCACCGAAAG
GCTGTCACCATTAAAAGAGAAGTTTTATAAGTCTTATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAACGTGCGTAAGGAGGAGTTTGGAGACAAACTCCACCTTGTCGAGATAACTTTCATCATTTGTATCCCGAAAGAAGAACAAGTGTGGGTTTTAGGCACCGAAAG
GCTGTCACCATTAAAAGAGAAGTTTTATAAGTCTTATAAGTGA
Protein sequenceShow/hide protein sequence
MTNVRKEEFGDKLHLVEITFIICIPKEEQVWVLGTERLSPLKEKFYKSYK