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IVF0021319 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021319
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein SIS2
Genome locationchr09:16480905..16482781
RNA-Seq ExpressionIVF0021319
SyntenyIVF0021319
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050184.1 protein SIS2 [Cucumis melo var. makuwa]4.61e-7575.71Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------
        MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE        
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------

Query:  -----------------------------------LALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
                                           LALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
Subjt:  -----------------------------------LALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV

XP_004140287.1 uncharacterized protein LOC101209610 [Cucumis sativus]5.06e-7492.54Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
        EEDEDYE DG+EISFEEKPT+PRTRNRPKREAEV
Subjt:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV

XP_008465810.1 PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]6.42e-84100Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
        EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
Subjt:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]1.35e-6079.85Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF  LPL P RAFFRP   SP VRFS  PS +R LRVV TRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
        EEDE+ +   +EISFEEKP LPRTRNRPKREAEV
Subjt:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV

XP_038875344.1 uncharacterized protein LOC120067823 [Benincasa hispida]3.82e-6785.82Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MA+ LISTRPFPFSSL +APPRAFFRP  FSP V FS +PS SR LRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
        EEDE+ + DG+EISFEEKP LPRTRNRPKREAEV
Subjt:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A0A0KTR1 Uncharacterized protein1.0e-5692.54Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARFLISTRPFPFS+LPLAPPR FFRP  FSPPVRF A+PSPSRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
        EEDEDYE DG+EISFEEKPT+PRTRNRPKREAEV
Subjt:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV

A0A1S3CQ37 uncharacterized protein LOC1035034023.9e-64100Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
        EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
Subjt:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV

A0A5D3BGL2 Protein SIS27.1e-5875.71Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------
        MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE        
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------

Query:  -----------------------------------LALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
                                           LALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV
Subjt:  -----------------------------------LALNQAIMEEDEDYEKDGTEISFEEKPTLPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623102.4e-4578.95Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF  LPL P RAFFRP   SP VRFS  PS +R LRVV TRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAE
        EEDE+ +   +EI FEEKP LPRTRNRPKREAE
Subjt:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREAE

A0A6J1JTZ0 uncharacterized protein LOC1114874914.5e-4479.55Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF   PL P RAFFRP   SP VRFS  PS +RTLRVV TRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREA
        EEDE+ +   +EISFEEKP LPRTRNRPKREA
Subjt:  EEDEDYEKDGTEISFEEKPTLPRTRNRPKREA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1532.2e-1442.45Show/hide
Query:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSP----SRTLR--VVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELA
        MAR  +S    P     ++ P +  +P    P   F+   +     +R +R   V TRAG STSSY+ AF+IP +LI  TV T++KI D LD+ FLE++A
Subjt:  MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSP----SRTLR--VVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELA

Query:  LNQAI--MEEDEDYEKDGTEISFEEKPTLPRTRNRPKRE
        LNQAI   E+ E+ E D +     ++P L RTRNRPKRE
Subjt:  LNQAI--MEEDEDYEKDGTEISFEEKPTLPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGGTTCCTTATCTCCACCCGACCCTTCCCCTTTTCCTCTCTCCCCCTTGCTCCCCCACGGGCATTCTTCAGACCCTTCACTTTTTCCCCGCCGGTCAGATTCTC
CGCCCACCCATCGCCCTCCAGGACCTTACGGGTGGTGAAGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTATCTCTTATTCTCATCA
CTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAAAAGATGGT
ACAGAAATATCTTTTGAAGAAAAACCAACTCTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATTCACTTCCAATACCCATGGCCAGGTTCCTTATCTCCACCCGACCCTTCCCCTTTTCCTCTCTCCCCCTTGCTCCCCCACGGGCATTCTTCAGACCCTTCACTTTTTCC
CCGCCGGTCAGATTCTCCGCCCACCCATCGCCCTCCAGGACCTTACGGGTGGTGAAGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTT
ATCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGG
ATTACGAAAAAGATGGTACAGAAATATCTTTTGAAGAAAAACCAACTCTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAATAAACTGCTTGCTTCTA
TTTTGGAGGTGTTCATATGATCGGATCAGGTGGCTGAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTTTCCCCTTAATAAGGATTAGTT
AAAAGTTAGTTGGA
Protein sequenceShow/hide protein sequence
MARFLISTRPFPFSSLPLAPPRAFFRPFTFSPPVRFSAHPSPSRTLRVVKTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEKDG
TEISFEEKPTLPRTRNRPKREAEV