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IVF0021337 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021337
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr08:16321119..16321310
RNA-Seq ExpressionIVF0021337
SyntenyIVF0021337
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036590.1 polyprotein [Cucumis melo var. makuwa]1.18e-1459.68Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTR
        M+LIKDY  TI YH  + NVVADT SRKS  + NRG +ALL+EL  FK +LN G  +NLM R
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTR

KAA0054749.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.39e-1558.73Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF
        MELIKDY+ TI YHPG+ NVVA+ LSRK+P ++ +GRIA +KEL   K +LN G   NL+ RF
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF

KAA0058456.1 CCHC-type integrase [Cucumis melo var. makuwa]4.95e-1858.73Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF
        M+LIKDYDCTI YH G+ N++AD LS K P  +NRGR+ALL+EL  FK +L      NLM RF
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF

KAA0059914.1 CCHC-type integrase [Cucumis melo var. makuwa]5.43e-1658.73Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF
        MELIKDYDCTI+YH G+ NV AD LSRKS   +N+G++ALL EL   K +LN     NL+ RF
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF

KAA0067194.1 polyprotein [Cucumis melo var. makuwa]5.79e-2166.67Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF
        M+LIKDYDCTI Y+P +VNV+AD LSRKS   +N+GR+ALLK+L  FKVVLN G F N M RF
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF

TrEMBL top hitse value%identityAlignment
A0A5A7SZR3 Polyprotein5.8e-1059.68Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTR
        M+LIKDY  TI YH  + NVVADT SRKS  + NRG +ALL+EL  FK +LN G  +NLM R
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTR

A0A5A7UMR3 DNA/RNA polymerases superfamily protein5.3e-1158.73Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF
        MELIKDY+ TI YHPG+ NVVA+ LSRK+P ++ +GRIA +KEL   K +LN G   NL+ RF
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF

A0A5A7UWA6 CCHC-type integrase6.2e-1258.73Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF
        M+LIKDYDCTI YH G+ N++AD LS K P  +NRGR+ALL+EL  FK +L      NLM RF
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF

A0A5A7VIK8 Polyprotein2.3e-1466.67Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF
        M+LIKDYDCTI Y+P +VNV+AD LSRKS   +N+GR+ALLK+L  FKVVLN G F N M RF
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF

A0A5D3DMM3 CCHC-type integrase3.1e-1158.73Show/hide
Query:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF
        MELIKDYDCTI+YH G+ NV AD LSRKS   +N+G++ALL EL   K +LN     NL+ RF
Subjt:  MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCATTAAAGATTATGATTGCACCATCGTTTACCACCCTGGAAGAGTAAACGTCGTAGCTGACACATTGAGTAGAAAGAGCCCTATCTCGAAGAACAGAGGAAG
AATAGCCCTACTAAAGGAATTGGGAAGTTTCAAGGTAGTTTTAAACGTAGGAGCATTTAGAAACTTGATGACACGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCATTAAAGATTATGATTGCACCATCGTTTACCACCCTGGAAGAGTAAACGTCGTAGCTGACACATTGAGTAGAAAGAGCCCTATCTCGAAGAACAGAGGAAG
AATAGCCCTACTAAAGGAATTGGGAAGTTTCAAGGTAGTTTTAAACGTAGGAGCATTTAGAAACTTGATGACACGCTTTTAA
Protein sequenceShow/hide protein sequence
MELIKDYDCTIVYHPGRVNVVADTLSRKSPISKNRGRIALLKELGSFKVVLNVGAFRNLMTRF