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IVF0021367 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021367
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr08:30737479..30738027
RNA-Seq ExpressionIVF0021367
SyntenyIVF0021367
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038378.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.70e-3844.71Show/hide
Query:  KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNL
        +LV++Q   T S+ +IE L L F+ +LY + P     P   +W  L+ +QN  L +  S EEI   +K LGR+K  G DGFT  FL+K W KL   F +L
Subjt:  KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNL

Query:  LDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAF
           F++N +LNACI ENFICLI+KKE+ + VKD RPISL TLTYK+V K   + L+    +++  L+  F
Subjt:  LDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAF

KAA0043278.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.60e-8173.81Show/hide
Query:  KSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRL
        KSF DIERL  GFFDV Y+RIP DRFIPFIT+WPC T +QN LLVT FS++EI K VKALGRNKA   DGFT DFLV +WPKL CS KNLLD+FH+N R 
Subjt:  KSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRL

Query:  NACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD
        NAC++ENFICLIQKKE+ +HVKDFR ISL  LTYKVVA VLA+ LK VMDSIIGP Q AFI+GRQI D
Subjt:  NACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD

KAA0059514.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]7.83e-4366.4Show/hide
Query:  QNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAK
        +N  LVT+F  EEIFK +KALG NKA GP+GF  +FL+K+W      FK+L+D+FH N RLNA IQENFICL+QKKE A  VKDF PISL TLTYKVVAK
Subjt:  QNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAK

Query:  VLAEHLKLVMDSIIGPLQSAFIEGR
        VL++ LK VMD+II P+QSAF EGR
Subjt:  VLAEHLKLVMDSIIGPLQSAFIEGR

TYK14532.1 reverse transcriptase [Cucumis melo var. makuwa]1.27e-3555.56Show/hide
Query:  VLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKK
        VLYKR  GDRFIP IT WPC+TP+QN LLVTRFSDEEIFK VKAL      GP                                NAC +   +   +KK
Subjt:  VLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKK

Query:  EEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD
        E+A  VKDFRPISL TL+YK+VAKVLAE LK VMDSI+ P QSAFIEGRQI D
Subjt:  EEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD

XP_038905468.1 probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Benincasa hispida]3.43e-3961.6Show/hide
Query:  LVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAE
        LV+RF+  +I + VK LGRNKA GPDGFT +F++K W  L  + K++ D F+ N +LN+CI+ENF+CLIQKK E V VKDFRPIS +T+ YK++AKVLAE
Subjt:  LVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAE

Query:  HLKLVMDSIIGPLQSAFIEGRQIPD
         LK VM S+I P QSAFIEGRQI D
Subjt:  HLKLVMDSIIGPLQSAFIEGRQIPD

TrEMBL top hitse value%identityAlignment
A0A5A7T695 LINE-1 retrotransposable element ORF2 protein7.0e-3244.71Show/hide
Query:  KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNL
        +LV++Q   T S+ +IE L L F+ +LY + P     P   +W  L+ +QN  L +  S EEI   +K LGR+K  G DGFT  FL+K W KL   F +L
Subjt:  KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNL

Query:  LDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAF
           F++N +LNACI ENFICLI+KKE+ + VKD RPISL TLTYK+V K   + L+    +++  L+  F
Subjt:  LDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAF

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein1.4e-2436.52Show/hide
Query:  KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNL
        K+++  G    +  DI    +  F+ +Y      +       W  ++     LL   F++ EI+  +K+  +NKA GPDGFT DFL K W  +  +  ++
Subjt:  KLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNL

Query:  LDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD
          +FHSN  +N  + E  I LI KK+    V DFRPISL T  YK++AKVLA+ LK  +   I  LQ AF++GRQI +
Subjt:  LDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD

A0A5A7UWP4 Transposon TX1 uncharacterized2.9e-3866.4Show/hide
Query:  QNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAK
        +N  LVT+F  EEIFK +KALG NKA GP+GF  +FL+K+W      FK+L+D+FH N RLNA IQENFICL+QKKE A  VKDF PISL TLTYKVVAK
Subjt:  QNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAK

Query:  VLAEHLKLVMDSIIGPLQSAFIEGR
        VL++ LK VMD+II P+QSAF EGR
Subjt:  VLAEHLKLVMDSIIGPLQSAFIEGR

A0A5D3CSY0 Reverse transcriptase1.3e-3055.56Show/hide
Query:  VLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKK
        VLYKR  GDRFIP IT WPC+TP+QN LLVTRFSDEEIFK VKAL      GP                                NAC +   +   +KK
Subjt:  VLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKK

Query:  EEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD
        E+A  VKDFRPISL TL+YK+VAKVLAE LK VMDSI+ P QSAFIEGRQI D
Subjt:  EEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD

A0A5D3E0C0 LINE-1 retrotransposable element ORF2 protein2.4e-6473.81Show/hide
Query:  KSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRL
        KSF DIERL  GFFDV Y+RIP DRFIPFIT+WPC T +QN LLVT FS++EI K VKALGRNKA   DGFT DFLV +WPKL CS KNLLD+FH+N R 
Subjt:  KSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRL

Query:  NACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD
        NAC++ENFICLIQKKE+ +HVKDFR ISL  LTYKVVA VLA+ LK VMDSIIGP Q AFI+GRQI D
Subjt:  NACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD

SwissProt top hitse value%identityAlignment
P08548 LINE-1 reverse transcriptase homolog4.7e-0930.37Show/hide
Query:  HWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKK-EEAVHVKDFRPISLA
        H P L+  +  +L    S  EI   ++ L + K+ GPDGFT++F      +L+    NL  N      L     E  I LI K  ++    +++RPISL 
Subjt:  HWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKK-EEAVHVKDFRPISLA

Query:  TLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQ
         +  K++ K+L   ++  +  II   Q  FI G Q
Subjt:  TLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQ

P14381 Transposon TX1 uncharacterized 149 kDa protein2.3e-1129.63Show/hide
Query:  PCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLT
        P ++  +   L T  + +E+ + ++ +  NK+ G DG T +F    W  L   F  +L        L    +   + L+ KK +   +K++RP+SL +  
Subjt:  PCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLT

Query:  YKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD
        YK+VAK ++  LK V+  +I P QS  + GR I D
Subjt:  YKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPD

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.2e-0735.48Show/hide
Query:  SDEEIFKEVKALGRNKALGPDGFTTDFLVKHW----PKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVV
        SD+EI   V A+ RNKA GPD FT +F  + W       + + K      H  +R NA      I LI K      +  FRP+S  T+ YK++
Subjt:  SDEEIFKEVKALGRNKALGPDGFTTDFLVKHW----PKLMCSFKNLLDNFHSNRRLNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGGTTGATGAGCAAGGGGCAGCAACGAAGTCCTTTCAGGACATTGAAAGGCTTACTTTGGGTTTCTTTGATGTTCTTTACAAAAGGATTCCAGGGGACAGATT
CATTCCATTTATCACTCACTGGCCTTGCCTCACCCCCAATCAAAATACGCTACTTGTTACCCGATTCTCAGATGAAGAAATCTTCAAGGAAGTAAAGGCTCTCGGAAGAA
ACAAAGCTCTAGGTCCGGATGGATTTACCACGGATTTCCTTGTTAAGCATTGGCCTAAGCTCATGTGCAGTTTTAAAAATCTGCTTGATAACTTTCACAGTAATAGAAGG
TTAAATGCTTGTATCCAAGAAAACTTCATCTGTTTGATACAAAAGAAGGAAGAAGCAGTCCACGTTAAAGATTTCAGACCTATCAGTCTCGCTACCCTAACCTACAAGGT
GGTGGCCAAAGTTTTAGCGGAACATTTGAAACTGGTTATGGACTCGATCATAGGTCCACTCCAAAGTGCATTCATTGAAGGAAGGCAAATTCCAGATTTTAATAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGGTTGATGAGCAAGGGGCAGCAACGAAGTCCTTTCAGGACATTGAAAGGCTTACTTTGGGTTTCTTTGATGTTCTTTACAAAAGGATTCCAGGGGACAGATT
CATTCCATTTATCACTCACTGGCCTTGCCTCACCCCCAATCAAAATACGCTACTTGTTACCCGATTCTCAGATGAAGAAATCTTCAAGGAAGTAAAGGCTCTCGGAAGAA
ACAAAGCTCTAGGTCCGGATGGATTTACCACGGATTTCCTTGTTAAGCATTGGCCTAAGCTCATGTGCAGTTTTAAAAATCTGCTTGATAACTTTCACAGTAATAGAAGG
TTAAATGCTTGTATCCAAGAAAACTTCATCTGTTTGATACAAAAGAAGGAAGAAGCAGTCCACGTTAAAGATTTCAGACCTATCAGTCTCGCTACCCTAACCTACAAGGT
GGTGGCCAAAGTTTTAGCGGAACATTTGAAACTGGTTATGGACTCGATCATAGGTCCACTCCAAAGTGCATTCATTGAAGGAAGGCAAATTCCAGATTTTAATAGCTAA
Protein sequenceShow/hide protein sequence
MKLVDEQGAATKSFQDIERLTLGFFDVLYKRIPGDRFIPFITHWPCLTPNQNTLLVTRFSDEEIFKEVKALGRNKALGPDGFTTDFLVKHWPKLMCSFKNLLDNFHSNRR
LNACIQENFICLIQKKEEAVHVKDFRPISLATLTYKVVAKVLAEHLKLVMDSIIGPLQSAFIEGRQIPDFNS