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IVF0021382 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021382
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1
Genome locationchr09:612691..613216
RNA-Seq ExpressionIVF0021382
SyntenyIVF0021382
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR007502 - Helicase-associated domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039296.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo var. makuwa]8.35e-7297.35Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLENYK
        IRYQLEGLLE ++
Subjt:  IRYQLEGLLENYK

KAA8542531.1 hypothetical protein F0562_023683 [Nyssa sinensis]1.51e-6387.27Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSK +VAS+K+KCSDEIISIAAMLS+GNSIFYRPKDKQVH DNAR++FHTGNVGDHIALLKVY+SW+ETN+STQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        +R QLEGLLE
Subjt:  IRYQLEGLLE

KAG0485966.1 hypothetical protein HPP92_010045 [Vanilla planifolia]5.67e-6489.09Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKM+VASEK+KCS+EIISIAAMLS+GNSIFYRPKDKQVH DNAR++FHTGNVGDHIALL VYNSW+ETN+STQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        IR QLEGLLE
Subjt:  IRYQLEGLLE

KOM40234.1 hypothetical protein LR48_Vigan04g043200 [Vigna angularis]1.19e-6390.91Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKM+VASE FKCSD+IISIAAMLS+GNSIFYRPKDKQVH DNARM+FHTGNVGDHIALLKVYNSW+ETNYSTQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        IR QL GLLE
Subjt:  IRYQLEGLLE

PQQ16725.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Prunus yedoensis var. nudiflora]8.21e-6490Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKM+VAS+K+KCSDE+ISIAAMLSIGNSIFYRPKDKQVH DNAR++FHTGNVGDHIALLKVYNSW+ETN+STQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        IR QLEGLLE
Subjt:  IRYQLEGLLE

TrEMBL top hitse value%identityAlignment
A0A0A0LUM2 Uncharacterized protein4.4e-5389.34Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTGNVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLENYKGMALIGQLN
        IR QLEGLLE  + + L   LN
Subjt:  IRYQLEGLLENYKGMALIGQLN

A0A1S3BVU3 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH11.3e-5288.52Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTGNVGDHIALLKVYNSWRETN+STQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLENYKGMALIGQLN
        IR QLEGLLE  + + L   LN
Subjt:  IRYQLEGLLENYKGMALIGQLN

A0A5A7TB84 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH11.5e-5692.62Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLENYKGMALIGQLN
        IRYQLEGLLE ++ + L   LN
Subjt:  IRYQLEGLLENYKGMALIGQLN

A0A6J1BZI7 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X15.7e-5388.52Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTGNVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLENYKGMALIGQLN
        IR QLEGLLE  + + L   LN
Subjt:  IRYQLEGLLENYKGMALIGQLN

A0A6J1C379 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X25.7e-5388.52Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVH DNARM+FHTGNVGDHIALLKVYNSWRETNYSTQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLENYKGMALIGQLN
        IR QLEGLLE  + + L   LN
Subjt:  IRYQLEGLLENYKGMALIGQLN

SwissProt top hitse value%identityAlignment
F4IJV4 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH63.4e-5086.36Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNA  +FH GNVGDHIA LK+YNSW+ETNYSTQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        IR QLEGLLE
Subjt:  IRYQLEGLLE

F4JMJ3 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH81.3e-4170.16Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFH--TGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRA
        M EFP+DPMLSKM+V SEK+KCS EII+IAAMLS+GNS+FYRPK++QV  D ARMDF+  T NVGDHIALL+VYNSW+E NYSTQWC E +IQ +SMKRA
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFH--TGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRA

Query:  RDIRYQLEGLLENYKGMALIGQLN
        RDIR QL GLL N  G+ L    N
Subjt:  RDIRYQLEGLLENYKGMALIGQLN

O60231 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX165.0e-3866.36Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAE P+DPMLSKM++ASEK+ CS+EI+++AAMLS+ NSIFYRPKDK VH DNAR++F     GDH+ LL VY  W E+ YS+QWC EN++Q RSM+RARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        +R QLEGLLE
Subjt:  IRYQLEGLLE

Q7YR39 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX165.0e-3866.36Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAE P+DPMLSKM++ASEK+ CS+EI+++AAMLS+ NSIFYRPKDK VH DNAR++F     GDH+ LL VY  W E+ YS+QWC EN++Q RSM+RARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        +R QLEGLLE
Subjt:  IRYQLEGLLE

Q8VY00 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH16.1e-5289.09Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNARM+FHTGNVGDHIALLKVY+SW+ETN+STQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        IR QLEGLLE
Subjt:  IRYQLEGLLE

Arabidopsis top hitse value%identityAlignment
AT1G32490.1 RNA helicase family protein4.3e-5389.09Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNARM+FHTGNVGDHIALLKVY+SW+ETN+STQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        IR QLEGLLE
Subjt:  IRYQLEGLLE

AT1G32490.2 RNA helicase family protein4.3e-5389.09Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNARM+FHTGNVGDHIALLKVY+SW+ETN+STQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        IR QLEGLLE
Subjt:  IRYQLEGLLE

AT2G35340.1 helicase domain-containing protein2.4e-5186.36Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPLDPMLSKM+V S+K+KCSDEIISIAAMLSIG SIFYRPKDKQVH DNA  +FH GNVGDHIA LK+YNSW+ETNYSTQWC ENYIQVRSMKRARD
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLE
        IR QLEGLLE
Subjt:  IRYQLEGLLE

AT3G26560.1 ATP-dependent RNA helicase, putative8.2e-2851.33Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        MAEFPL+P LSKM++AS    CSDEI+++ AM+  GN IFYRP++KQ   D  R  F     GDH+ LL VY +W+  N+S  WC EN+IQ RS++RA+D
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLENYK
        +R QL  +++ YK
Subjt:  IRYQLEGLLENYK

AT5G13010.1 RNA helicase family protein3.6e-2342.48Show/hide
Query:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD
        M EFPLDP L+KM++  E+  C DE+++I +MLS+  S+F+RPK++    D AR  F      DH+ LL VY  W+E +Y   WC ++Y+QV+ +++AR+
Subjt:  MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARD

Query:  IRYQLEGLLENYK
        +R QL  +L+  K
Subjt:  IRYQLEGLLENYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGTTTCCTCTTGATCCCATGCTTTCTAAGATGATGGTTGCTTCTGAAAAATTCAAATGTTCGGATGAGATTATTTCTATTGCAGCTATGCTTTCTATTGGAAA
TTCTATCTTTTATCGTCCGAAGGATAAACAAGTTCATGTTGACAATGCCCGAATGGATTTTCACACTGGGAATGTGGGGGATCACATAGCACTGTTGAAGGTCTACAACT
CTTGGAGGGAAACAAATTACTCTACGCAATGGTGCCGCGAGAATTACATCCAGGTCAGAAGTATGAAGCGTGCCAGAGATATCAGATATCAACTTGAAGGGCTTTTAGAA
AATTACAAAGGAATGGCTCTTATCGGACAATTAAACATCCACAGACTGTTCATATACATCCTAGCTCAGGTTGGCTCAGGTTCTTCCAAGATGGGTTGTATACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGTTTCCTCTTGATCCCATGCTTTCTAAGATGATGGTTGCTTCTGAAAAATTCAAATGTTCGGATGAGATTATTTCTATTGCAGCTATGCTTTCTATTGGAAA
TTCTATCTTTTATCGTCCGAAGGATAAACAAGTTCATGTTGACAATGCCCGAATGGATTTTCACACTGGGAATGTGGGGGATCACATAGCACTGTTGAAGGTCTACAACT
CTTGGAGGGAAACAAATTACTCTACGCAATGGTGCCGCGAGAATTACATCCAGGTCAGAAGTATGAAGCGTGCCAGAGATATCAGATATCAACTTGAAGGGCTTTTAGAA
AATTACAAAGGAATGGCTCTTATCGGACAATTAAACATCCACAGACTGTTCATATACATCCTAGCTCAGGTTGGCTCAGGTTCTTCCAAGATGGGTTGTATACCATGA
Protein sequenceShow/hide protein sequence
MAEFPLDPMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHVDNARMDFHTGNVGDHIALLKVYNSWRETNYSTQWCRENYIQVRSMKRARDIRYQLEGLLE
NYKGMALIGQLNIHRLFIYILAQVGSGSSKMGCIP