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IVF0021385 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021385
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:21674296..21674505
RNA-Seq ExpressionIVF0021385
SyntenyIVF0021385
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041782.1 uncharacterized protein E6C27_scaffold67G001450 [Cucumis melo var. makuwa]1.60e-2169.12Show/hide
Query:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL
        M PRGR RQVRQV  DVP TRS N AQA  E+SSNPH  VG+  +EGM D   QK+DKRFSIERLKAL
Subjt:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL

KAA0046177.1 uncharacterized protein E6C27_scaffold376G00360 [Cucumis melo var. makuwa]1.81e-1866.18Show/hide
Query:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL
        M PRGR R+VR++ATDVPA  SINR QA  E+SSN + LVGR A EGM    P KLDKRF I+RLKAL
Subjt:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL

KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]2.71e-1455.56Show/hide
Query:  RQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKL-----------DKRFSIERLKAL
        R+ RQVA  VP TR  NRAQA G++SSNPH+ V +  EE MFD F Q+L           DKRF IERLKAL
Subjt:  RQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKL-----------DKRFSIERLKAL

KAA0067233.1 uncharacterized protein E6C27_scaffold418G00440 [Cucumis melo var. makuwa]2.00e-1465.15Show/hide
Query:  RGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKALR
        RGR RQVRQVA DV AT S+NRAQA  E+SSNPH LVGR  EE M D  P+      SI+RLKALR
Subjt:  RGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKALR

TYK29193.1 uncharacterized protein E5676_scaffold880G00030 [Cucumis melo var. makuwa]1.01e-3895.59Show/hide
Query:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL
        MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIER K +
Subjt:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL

TrEMBL top hitse value%identityAlignment
A0A5A7TVM1 Uncharacterized protein1.9e-0955.56Show/hide
Query:  RQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKL-----------DKRFSIERLKAL
        R+ RQVA  VP TR  NRAQA G++SSNPH+ V +  EE MFD F Q+L           DKRF IERLKAL
Subjt:  RQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKL-----------DKRFSIERLKAL

A0A5A7TWA5 Uncharacterized protein1.4e-1266.18Show/hide
Query:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL
        M PRGR R+VR++ATDVPA  SINR QA  E+SSN + LVGR A EGM    P KLDKRF I+RLKAL
Subjt:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL

A0A5A7VGL4 Retrotrans_gag domain-containing protein8.3e-1065.15Show/hide
Query:  RGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKALR
        RGR RQVRQVA DV AT S+NRAQA  E+SSNPH LVGR  EE M D  P+      SI+RLKALR
Subjt:  RGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKALR

A0A5D3DTR2 Retrotrans_gag domain-containing protein3.0e-1569.12Show/hide
Query:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL
        M PRGR RQVRQV  DVP TRS N AQA  E+SSNPH  VG+  +EGM D   QK+DKRFSIERLKAL
Subjt:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKAL

A0A5D3DZK7 Uncharacterized protein5.2e-2898.48Show/hide
Query:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLK
        MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIER K
Subjt:  MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACCACGAGGAAGGCCAAGGCAAGTCAGGCAAGTGGCAACCGATGTTCCAGCTACTAGAAGTATCAATAGAGCGCAAGCATTTGGTGAGATGTCTAGTAACCCACA
TGAATTAGTGGGAAGAGGAGCAGAGGAAGGCATGTTTGACTGCTTTCCTCAAAAGTTAGATAAAAGGTTTAGCATTGAGAGGTTAAAGGCGTTAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACCACGAGGAAGGCCAAGGCAAGTCAGGCAAGTGGCAACCGATGTTCCAGCTACTAGAAGTATCAATAGAGCGCAAGCATTTGGTGAGATGTCTAGTAACCCACA
TGAATTAGTGGGAAGAGGAGCAGAGGAAGGCATGTTTGACTGCTTTCCTCAAAAGTTAGATAAAAGGTTTAGCATTGAGAGGTTAAAGGCGTTAAGATGA
Protein sequenceShow/hide protein sequence
MVPRGRPRQVRQVATDVPATRSINRAQAFGEMSSNPHELVGRGAEEGMFDCFPQKLDKRFSIERLKALR