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IVF0021393 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021393
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:5626105..5626671
RNA-Seq ExpressionIVF0021393
SyntenyIVF0021393
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.71e-11094.68Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQTQ  SEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNS+AGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRG+HNEYLYYEVPAAVP+QSDE QQQENA VP QSDEQQQQEN EEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.71e-12199.47Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMH HGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.18e-11897.34Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVP+QS+E QQQENA VP QSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]7.45e-11594.68Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYY+VPAAVP+QSDEQQQQENA VPEQSDEQQQQEN EEIQQQRVQ RRRQ A+NR+RPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

XP_016900498.1 PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]3.72e-11594.68Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYY+VPAAVP+QSDEQQQQENA VPEQSDEQQQQEN EEIQQQRVQ RRRQ A+NR+RPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X19.9e-9094.68Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYY+VPAAVP+QSDEQQQQENA VPEQSDEQQQQEN EEIQQQRVQ RRRQ A+NR+RPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein2.6e-9096.28Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM  TQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVP+QS+E QQQENA VP QSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.5e-9599.47Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMH HGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.4e-9397.34Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVP+QS+E QQQENA VP QSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.9e-9094.68Show/hide
Query:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
        MENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFG TYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY
Subjt:  MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYY

Query:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH
        DLGSDPSSSYMHGHGRGRGEHNEYLYY+VPAAVP+QSDEQQQQENA VPEQSDEQQQQEN EEIQQQRVQ RRRQ A+NR+RPGCGTH
Subjt:  DLGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGG
GGAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCG
GTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATAC
ATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTTCCTGCAGCGGTACCCAAGCAATCAGATGAGCAACAACAACAAGAGAATGCAGT
AGTACCCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTCAAAGTCGACGACGACAACCAGCTAGAAATCGTCGACGTCCAG
GTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGG
GGAAGAAGTGCCTCCCATGACACAGACACAGACACAAAGCGAGCATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCG
GTCAATCGTCAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCGTCTTCATAC
ATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTTCCTGCAGCGGTACCCAAGCAATCAGATGAGCAACAACAACAAGAGAATGCAGT
AGTACCCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTCAAAGTCGACGACGACAACCAGCTAGAAATCGTCGACGTCCAG
GTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSY
MHGHGRGRGEHNEYLYYEVPAAVPKQSDEQQQQENAVVPEQSDEQQQQENQEEIQQQRVQSRRRQPARNRRRPGCGTH