CuGenDBv2

Gene ID	IVF0021418
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	mediator of RNA polymerase II transcription subunit 8 isoform X1
Genome location	chr04:20709481..20735043
RNA-Seq Expression	IVF0021418
Synteny	IVF0021418
Gene Ontology terms	GO:0016592 - mediator complex (cellular component)
InterPro domains	IPR038795 - Mediator of RNA polymerase II transcription subunit 8, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0068194.1 mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucumis melo var. makuwa]

4.43e-294

100

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Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
        STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT

Query:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
Subjt:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

XP_004144418.1 mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis sativus]

1.95e-287

98.62

Show/hide

Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAI PTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLPGEQRQIT TLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTS NISSQGAVIQ PPGSQLVGRSAASPSGATSATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
        STSPMPYANSPRSSAN+MNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQ LLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT

Query:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
Subjt:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

XP_008465097.1 PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucumis melo]

2.75e-293

100

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Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
        STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT

Query:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
Subjt:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

XP_008465098.1 PREDICTED: mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis melo]

1.03e-290

99.77

Show/hide

Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQ PPGSQLVGRSAASPSGATSATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
        STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT

Query:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
Subjt:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

XP_011651696.1 mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucumis sativus]

5.21e-290

98.85

Show/hide

Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAI PTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLPGEQRQIT TLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTS NISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
        STSPMPYANSPRSSAN+MNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQ LLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT

Query:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
Subjt:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CN44 mediator of RNA polymerase II transcription subunit 8 isoform X2

3.3e-229

99.77

Show/hide

Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVI QPPGSQLVGRSAASPSGATSATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
        STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT

Query:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
Subjt:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

A0A1S3CPL4 mediator of RNA polymerase II transcription subunit 8 isoform X1

4.6e-231

100

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Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
        STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT

Query:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
Subjt:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

A0A5A7VLA2 Mediator of RNA polymerase II transcription subunit 8 isoform X1

4.6e-231

100

Show/hide

Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
        STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGIT

Query:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
Subjt:  QSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

A0A6J1GV67 mediator of RNA polymerase II transcription subunit 8 isoform X1

4.3e-205

89.16

Show/hide

Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MAT+DG VQNQPQQQQPL A Q V AERLNQAVQQQLNLEA+K RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKR+QLLLGM NMP+STQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAI PTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLP +QRQIT TLPMHL+DVLN GDGVQSFNETSGMYAK+TPLTS NI   G+++QQPPGSQLVGRSAASPSG   ATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQ------RKLM-LPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSG
        +TSP+PYANSPRS+AN+MN PSPQQQTQQQQQQQ QQ QQ      +KLM LPQHQQLLAQQQMRQS MQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSG
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQ------RKLM-LPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSG

Query:  HVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        H+QHGITQSQLGQGNQMNRHL QFSGAANSSLFN AQTTP+SQ
Subjt:  HVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

A0A6J1IZN9 mediator of RNA polymerase II transcription subunit 8 isoform X1

1.7e-204

88.09

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Query:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MAT+DG VQNQPQQQQPL A QVV AERLNQAVQQQLNLEA+K RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEV+DNSKR+QLLLGM NMP+STQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAI PTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN
        IQEQENLLRAAVNFGEGLRLP +QRQIT TLPMHL+DVLN GDGVQSFNETSGMYAK+TPLTS NI   G+++QQPPGSQLVGRSAASPSG   ATSFDN
Subjt:  IQEQENLLRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDN

Query:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKL---------MLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMS
        +T P+PYANSPRS+AN+MN PSPQQQTQQQQQQQ QQ QQ++L          LPQHQQLLAQQQMRQS MQGIGQIHGQHQMQFSQPLAHQQFQGRQMS
Subjt:  STSPMPYANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKL---------MLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMS

Query:  SGHVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        SGH+QHGITQSQLGQGNQMNRHL QFSGAANSSLFN AQTTP+SQ
Subjt:  SGHVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

SwissProt top hits

e value

%identity

Alignment

Q4V3C1 Mediator of RNA polymerase II transcription subunit 8

4.7e-124

60.04

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Query:  VQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNV
        ++ QPQQ  P P      AE+LN  ++++LNLE+LK RA +L KAI+RILEDFD YGRTNTTPKWQDILGQYSMVNLELFNIV+E+K+VS AFVV PKNV
Subjt:  VQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNV

Query:  NAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAKIQEQENL
        NA N+ ILPVMLSSKLLPEME DDN+KREQLL G+ ++P+  QIE+LK R++MI AACE+AE++LA+TRKAY FG RQGP++ PT+DK QAAKIQEQE +
Subjt:  NAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAKIQEQENL

Query:  LRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDNSTSPMPY
        LR AVN G+G +LP +QRQIT+ LP HL DVL   D        +G  A   P  S NI++QG  + Q  G+Q VGRSAASPSG     +FDN+TSP+PY
Subjt:  LRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDNSTSPMPY

Query:  ANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQH--QQLLA--QQQMRQSSMQGIGQ-------------------IHGQHQMQFSQPL-AHQ
        +NSPR++  ++N PSPQ Q QQQQ QQ QQ + + + LPQH  QQLLA  QQQ+RQSSMQG+GQ                    HGQHQM +SQP+ AHQ
Subjt:  ANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQH--QQLLA--QQQMRQSSMQGIGQ-------------------IHGQHQMQFSQPL-AHQ

Query:  QFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QFQ RQ+S GH+QH ++Q QL     MNRHL+QFSG ANS+LF  AQ +P+SQ
Subjt:  QFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G03070.1 mediator subunit 8

3.4e-125

60.04

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Query:  VQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNV
        ++ QPQQ  P P      AE+LN  ++++LNLE+LK RA +L KAI+RILEDFD YGRTNTTPKWQDILGQYSMVNLELFNIV+E+K+VS AFVV PKNV
Subjt:  VQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNV

Query:  NAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAKIQEQENL
        NA N+ ILPVMLSSKLLPEME DDN+KREQLL G+ ++P+  QIE+LK R++MI AACE+AE++LA+TRKAY FG RQGP++ PT+DK QAAKIQEQE +
Subjt:  NAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAKIQEQENL

Query:  LRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDNSTSPMPY
        LR AVN G+G +LP +QRQIT+ LP HL DVL   D        +G  A   P  S NI++QG  + Q  G+Q VGRSAASPSG     +FDN+TSP+PY
Subjt:  LRAAVNFGEGLRLPGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDNSTSPMPY

Query:  ANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQH--QQLLA--QQQMRQSSMQGIGQ-------------------IHGQHQMQFSQPL-AHQ
        +NSPR++  ++N PSPQ Q QQQQ QQ QQ + + + LPQH  QQLLA  QQQ+RQSSMQG+GQ                    HGQHQM +SQP+ AHQ
Subjt:  ANSPRSSANIMNTPSPQQQTQQQQQQQLQQVQQRKLMLPQH--QQLLA--QQQMRQSSMQGIGQ-------------------IHGQHQMQFSQPL-AHQ

Query:  QFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ
        QFQ RQ+S GH+QH ++Q QL     MNRHL+QFSG ANS+LF  AQ +P+SQ
Subjt:  QFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

Sequences

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CDS sequence

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ATGGCAACCATTGACGGGGCGGTGCAGAATCAGCCTCAGCAGCAACAGCCTCTTCCGGCGCAGCAGGTGGTTTTCGCGGAAAGGCTAAACCAGGCAGTTCAGCAACAGTT
GAACCTAGAGGCTCTGAAGAATCGAGCTACTACTCTCTTTAAAGCCATTTCTCGGATCCTTGAAGATTTTGATGTCTATGGTCGCACCAATACCACACCTAAATGGCAAG
ACATACTGGGGCAGTATTCTATGGTGAATCTCGAGCTTTTCAACATTGTTGACGAAATTAAGAAAGTTTCGAAGGCTTTCGTTGTACATCCAAAGAATGTTAATGCAGAG
AACTCTACAATACTACCAGTTATGTTGTCCTCCAAACTACTGCCTGAGATGGAGGTAGATGACAATTCGAAACGAGAGCAGTTGCTTCTTGGGATGCACAACATGCCAGT
ATCTACACAGATTGAGAAATTAAAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAAACTCGAAAAGCATATTGCTTCGGAATGC
GTCAAGGGCCAGCAATAACTCCAACCTTAGATAAGGCTCAAGCAGCAAAAATTCAGGAGCAAGAAAATTTACTCCGAGCTGCTGTTAACTTCGGGGAAGGATTAAGATTA
CCCGGTGAGCAACGACAAATTACGTCAACACTTCCGATGCATTTGATAGATGTGCTGAATGCAGGTGATGGAGTGCAGAGTTTTAACGAAACGTCTGGTATGTATGCAAA
GAGTACTCCTCTAACGTCAACTAATATTAGTAGTCAAGGAGCAGTGATACAGCAGCCTCCTGGATCACAACTTGTTGGAAGATCAGCTGCTTCGCCTTCTGGTGCTACGA
GTGCCACATCCTTTGACAACTCAACATCGCCAATGCCCTATGCTAACTCTCCAAGGTCAAGTGCAAACATTATGAACACACCTTCTCCTCAACAGCAGACCCAACAACAG
CAACAGCAGCAACTTCAGCAGGTTCAACAAAGGAAATTGATGCTACCTCAGCATCAGCAACTCCTTGCTCAACAACAGATGAGACAGTCTTCTATGCAAGGAATAGGACA
GATTCATGGACAGCATCAGATGCAGTTTTCACAGCCACTGGCACACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGGCATGTTCAACATGGAATTACTCAAAGCCAAC
TAGGCCAAGGAAATCAAATGAATCGTCATTTGCACCAGTTTTCTGGTGCTGCTAACAGTAGTTTGTTTAATGTTGCCCAGACTACACCAACTTCTCAATGA

mRNA sequence

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ATGAAATAGATATTACAGTTAAAATTTGGAATGGAATCTGCTTCCCGGTAAAGCGGAATCAATTGGAGCACCTCAGGCAAGCCTGGCCTCGCAGCCAGACCCGAGCGAGA
TCTACACTCGCCGTACTCGTTTTATGTTACTCGCATCAAACAGGGCAACTGTTGTCTTTCGCTAATGGCAACCATTGACGGGGCGGTGCAGAATCAGCCTCAGCAGCAAC
AGCCTCTTCCGGCGCAGCAGGTGGTTTTCGCGGAAAGGCTAAACCAGGCAGTTCAGCAACAGTTGAACCTAGAGGCTCTGAAGAATCGAGCTACTACTCTCTTTAAAGCC
ATTTCTCGGATCCTTGAAGATTTTGATGTCTATGGTCGCACCAATACCACACCTAAATGGCAAGACATACTGGGGCAGTATTCTATGGTGAATCTCGAGCTTTTCAACAT
TGTTGACGAAATTAAGAAAGTTTCGAAGGCTTTCGTTGTACATCCAAAGAATGTTAATGCAGAGAACTCTACAATACTACCAGTTATGTTGTCCTCCAAACTACTGCCTG
AGATGGAGGTAGATGACAATTCGAAACGAGAGCAGTTGCTTCTTGGGATGCACAACATGCCAGTATCTACACAGATTGAGAAATTAAAGACTAGAATTGAAATGATTGGA
GCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAAACTCGAAAAGCATATTGCTTCGGAATGCGTCAAGGGCCAGCAATAACTCCAACCTTAGATAAGGCTCAAGCAGC
AAAAATTCAGGAGCAAGAAAATTTACTCCGAGCTGCTGTTAACTTCGGGGAAGGATTAAGATTACCCGGTGAGCAACGACAAATTACGTCAACACTTCCGATGCATTTGA
TAGATGTGCTGAATGCAGGTGATGGAGTGCAGAGTTTTAACGAAACGTCTGGTATGTATGCAAAGAGTACTCCTCTAACGTCAACTAATATTAGTAGTCAAGGAGCAGTG
ATACAGCAGCCTCCTGGATCACAACTTGTTGGAAGATCAGCTGCTTCGCCTTCTGGTGCTACGAGTGCCACATCCTTTGACAACTCAACATCGCCAATGCCCTATGCTAA
CTCTCCAAGGTCAAGTGCAAACATTATGAACACACCTTCTCCTCAACAGCAGACCCAACAACAGCAACAGCAGCAACTTCAGCAGGTTCAACAAAGGAAATTGATGCTAC
CTCAGCATCAGCAACTCCTTGCTCAACAACAGATGAGACAGTCTTCTATGCAAGGAATAGGACAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCACTGGCACAC
CAGCAATTTCAGGGAAGGCAGATGTCTTCTGGGCATGTTCAACATGGAATTACTCAAAGCCAACTAGGCCAAGGAAATCAAATGAATCGTCATTTGCACCAGTTTTCTGG
TGCTGCTAACAGTAGTTTGTTTAATGTTGCCCAGACTACACCAACTTCTCAATGATTCCAAATATTTCAGCTACAATGTCATCTCAACCACTCATGTCACGTATGCAGCA
TGGTTTACCTGGGACCAATCTGCAGCGAAACCACGCTTCTCAAATTCTAAGTGATCAGATGTTCATGGGAGGAGGTAGTACTGGTGGTATGATGCCTATGCAACAACAGC
AGCAACAACAGCAAGCACAACTTGCTTCACAAGGTGCATTTGGTAACATGCCAGCAAATGCCCAGTCTCTACAATCAGGTATGGTACCACTTCAAAATATGCAACAAACT
CACCCTAATTTTGGCCAGCAGAGGCAGCAAAACCAGCAATAACCACTTTGCTTTGGAAAGTGAAAAAGGGTGTCATCATACCCTGCACTCTTCATATTTAGCCTTTTGCC
CTTGCATGTAATGCAATCCATTATATATTTTATGTGTACTATTAACTTTGTAGAATGGCTTTGTGTAGAGCTAACCGAAATGACTTGGTTTAAACATTAATGCTATGAAG
TGTTTACTTTAATAAATACTCC

Protein sequence

Show/hide protein sequence

MATIDGAVQNQPQQQQPLPAQQVVFAERLNQAVQQQLNLEALKNRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAE
NSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAITPTLDKAQAAKIQEQENLLRAAVNFGEGLRL
PGEQRQITSTLPMHLIDVLNAGDGVQSFNETSGMYAKSTPLTSTNISSQGAVIQQPPGSQLVGRSAASPSGATSATSFDNSTSPMPYANSPRSSANIMNTPSPQQQTQQQ
QQQQLQQVQQRKLMLPQHQQLLAQQQMRQSSMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQGNQMNRHLHQFSGAANSSLFNVAQTTPTSQ

IVF0021418 (gene) of Melon (IVF77) v1 genome