| GenBank top hits | e value | %identity | Alignment |
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| KAA0054966.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa] | 1.87e-50 | 73.02 | Show/hide |
Query: VLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTRAHWI
VLKLP+F + EV VD CG GI VLSQ HP +E+FSE+LS SRQ+WSTYE +LYALVRALKQ EHYLLS+EFILLTDHFSLKYL ++SI+ A WI
Subjt: VLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTRAHWI
Query: SYIQRFDFTIKHQVGKENKVADALSR
SY QRFDF IKHQ GKENKVADALSR
Subjt: SYIQRFDFTIKHQVGKENKVADALSR
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| KAA0063448.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 1.33e-57 | 71.76 | Show/hide |
Query: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
L++ VLKLP+F+ + EVVVDACG GI VLSQ GHP +E+FSEKLS SRQ+WSTYE +LYALVRALKQ EHYLLS+EFILLTDHFSLKYL ++SI+R
Subjt: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
Query: RAHWISYIQRFDFTIKHQVGKENKVADALSR
A WISYIQ F+F IKHQ GKEN++ DALSR
Subjt: RAHWISYIQRFDFTIKHQVGKENKVADALSR
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| KAA0066988.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 3.04e-92 | 100 | Show/hide |
Query: MKLNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESIN
MKLNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESIN
Subjt: MKLNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESIN
Query: RTRAHWISYIQRFDFTIKHQVGKENKVADALSRIGT
RTRAHWISYIQRFDFTIKHQVGKENKVADALSRIGT
Subjt: RTRAHWISYIQRFDFTIKHQVGKENKVADALSRIGT
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| KAE8652794.1 hypothetical protein Csa_022828 [Cucumis sativus] | 5.36e-48 | 65.19 | Show/hide |
Query: MKLNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESIN
+ L S VLKLP F+ EV VDA G GI VLSQ GHP+ E+FSEKLS+ RQ WSTYE +LYALVRALKQ EHYLL+ FILLTDHFSLK+L +++I+
Subjt: MKLNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESIN
Query: RTRAHWISYIQRFDFTIKHQVGKENKVADALSRIG
R A W+ ++QRFDF IKH GK NKVADALSR G
Subjt: RTRAHWISYIQRFDFTIKHQVGKENKVADALSRIG
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| TYJ95781.1 Integrase, catalytic core [Cucumis melo var. makuwa] | 2.40e-55 | 71.76 | Show/hide |
Query: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
L++ VLKLP+F+ + EVVVDACG GI VLSQ GHP +E+FSEKLS SRQ+WSTYE +LYALVRALKQ EHYLLS+EFILLTDHFSLKYL ++SI+R
Subjt: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
Query: RAHWISYIQRFDFTIKHQVGKENKVADALSR
A WISYIQ F+F IKHQ GKEN++ DALSR
Subjt: RAHWISYIQRFDFTIKHQVGKENKVADALSR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7V788 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.2e-45 | 71.76 | Show/hide |
Query: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
L++ VLKLP+F+ + EVVVDACG GI VLSQ GHP +E+FSEKLS SRQ+WSTYE +LYALVRALKQ EHYLLS+EFILLTDHFSLKYL ++SI+R
Subjt: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
Query: RAHWISYIQRFDFTIKHQVGKENKVADALSR
A WISYIQ F+F IKHQ GKEN++ DALSR
Subjt: RAHWISYIQRFDFTIKHQVGKENKVADALSR
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| A0A5A7VGY2 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.8e-70 | 100 | Show/hide |
Query: MKLNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESIN
MKLNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESIN
Subjt: MKLNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESIN
Query: RTRAHWISYIQRFDFTIKHQVGKENKVADALSRIGT
RTRAHWISYIQRFDFTIKHQVGKENKVADALSRIGT
Subjt: RTRAHWISYIQRFDFTIKHQVGKENKVADALSRIGT
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| A0A5D3BAY9 Integrase, catalytic core | 3.2e-45 | 71.76 | Show/hide |
Query: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
L++ VLKLP+F+ + EVVVDACG GI VLSQ GHP +E+FSEKLS SRQ+WSTYE +LYALVRALKQ EHYLLS+EFILLTDHFSLKYL ++SI+R
Subjt: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
Query: RAHWISYIQRFDFTIKHQVGKENKVADALSR
A WISYIQ F+F IKHQ GKEN++ DALSR
Subjt: RAHWISYIQRFDFTIKHQVGKENKVADALSR
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| A0A5D3BBL1 Transposon Ty3-I Gag-Pol polyprotein | 1.3e-35 | 65.55 | Show/hide |
Query: NNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTRAHWISYIQRFD
N EV V+A VLSQ HP +E+FSEKLS RQ WSTY+ ++YAL+RALKQ EHYLLSKEF+LLTDHFSLKYLQ ++SIN+ A WIS+++RFD
Subjt: NNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTRAHWISYIQRFD
Query: FTIKHQVGKENKVADALSR
F IKH+ GKENKVA+ALSR
Subjt: FTIKHQVGKENKVADALSR
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| A0A5D3DGR0 Reverse transcriptase | 3.0e-43 | 73.02 | Show/hide |
Query: VLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTRAHWI
VLKLP+F + EV VD CG GI VLSQ HP +E+FSE+LS SRQ+WSTYE +LYALVRALKQ EHYLLS+EFILLTDHFSLKYL ++SI+ A WI
Subjt: VLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTRAHWI
Query: SYIQRFDFTIKHQVGKENKVADALSR
SY QRFDF IKHQ GKENKVADALSR
Subjt: SYIQRFDFTIKHQVGKENKVADALSR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 3.2e-18 | 38.64 | Show/hide |
Query: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
++ +LK+P+F + DA + VLSQ GHP+ + S L+ +ST E +L A+V A K HYLL + F + +DH L +L + N
Subjt: LNSQSVLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRT
Query: RAHWISYIQRFDFTIKHQVGKENKVADALSRI
W + FDF IK+ GKEN VADALSRI
Subjt: RAHWISYIQRFDFTIKHQVGKENKVADALSRI
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.1e-14 | 37.01 | Show/hide |
Query: VLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLL-SKEFILLTDHFSLKYLQPRESINRTRAHW
+LK P+F ++ DA +GI VLSQ G P + S L Q ++T E +L A+V AL + +++L S+E + TDH L + + N W
Subjt: VLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLL-SKEFILLTDHFSLKYLQPRESINRTRAHW
Query: ISYIQRFDFTIKHQVGKENKVADALSR
SYI + + + ++ GKEN VADALSR
Subjt: ISYIQRFDFTIKHQVGKENKVADALSR
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 7.8e-17 | 37.01 | Show/hide |
Query: VLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTRAHWI
+L+LP+F + DA + VLSQ GHP + F S L+ +S E +L A+V A K HYLL ++F++ +DH L++L + W
Subjt: VLKLPEFNNSLEVVVDACGAGIETVLSQGGHPMVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTRAHWI
Query: SYIQRFDFTIKHQVGKENKVADALSRI
+ + F I + GKEN VADALSRI
Subjt: SYIQRFDFTIKHQVGKENKVADALSRI
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 6.4e-11 | 33.08 | Show/hide |
Query: LPEFNN--SLEVVVDACGAGIETVLSQGGHP-----MVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTR
L FNN + + DA GI VL + + +V +FS+ L S+++ + E +L +++AL + L K F L TDH SL LQ + R
Subjt: LPEFNN--SLEVVVDACGAGIETVLSQGGHP-----MVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTR
Query: AHWISYIQRFDFTIKHQVGKENKVADALSR
W+ + +DFT+++ G +N VADA+SR
Subjt: AHWISYIQRFDFTIKHQVGKENKVADALSR
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 6.4e-11 | 33.08 | Show/hide |
Query: LPEFNN--SLEVVVDACGAGIETVLSQGGHP-----MVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTR
L FNN + + DA GI VL + + +V +FS+ L S+++ + E +L +++AL + L K F L TDH SL LQ + R
Subjt: LPEFNN--SLEVVVDACGAGIETVLSQGGHP-----MVEFFSEKLSSSRQAWSTYEHDLYALVRALKQREHYLLSKEFILLTDHFSLKYLQPRESINRTR
Query: AHWISYIQRFDFTIKHQVGKENKVADALSR
W+ + +DFT+++ G +N VADA+SR
Subjt: AHWISYIQRFDFTIKHQVGKENKVADALSR
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