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IVF0021468 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021468
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUPF0235 protein C15orf40 homolog
Genome locationchr11:587301..588862
RNA-Seq ExpressionIVF0021468
SyntenyIVF0021468
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151587.1 uncharacterized protein LOC101218498 [Cucumis sativus]7.02e-4594.05Show/hide
Query:  MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        MTV+ LNGLKSKQNY S RKIPFDLGKKMPPAKKGKTKAPKATESIQSSVK+NNYPSCLRSVSPSSVAITIHAKPGSKIASITD
Subjt:  MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

XP_008460904.1 PREDICTED: UPF0235 protein LHK_03181 [Cucumis melo]3.17e-48100Show/hide
Query:  MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
Subjt:  MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

XP_038902100.1 UPF0235 protein C15orf40 homolog isoform X1 [Benincasa hispida]8.68e-2698.21Show/hide
Query:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        MPPAKKGKTKA KATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
Subjt:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

XP_038902101.1 UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida]8.44e-2698.21Show/hide
Query:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        MPPAKKGKTKA KATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
Subjt:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

XP_038902103.1 UPF0235 protein C15orf40 homolog isoform X3 [Benincasa hispida]6.54e-2698.21Show/hide
Query:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        MPPAKKGKTKA KATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
Subjt:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

TrEMBL top hitse value%identityAlignment
A0A0A0LMY2 Uncharacterized protein7.7e-3494.05Show/hide
Query:  MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        MTV+ LNGLKSKQNY S RKIPFDLGKKMPPAKKGKTKAPKATESIQSSVK+NNYPSCLRSVSPSSVAITIHAKPGSKIASITD
Subjt:  MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

A0A1S3CDI8 UPF0235 protein LHK_031812.2e-36100Show/hide
Query:  MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
Subjt:  MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

A0A6J1CR98 uncharacterized protein LOC1110134514.7e-1587.5Show/hide
Query:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        MPPAKKGKTKAPKATESIQS    N +PSCLRSV+PSSVAITIHAKPGSKIASITD
Subjt:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

A0A6J1EMK4 uncharacterized protein LOC1114348893.6e-1585.71Show/hide
Query:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        M PAKKGKTKA K TES +S +KTNNYPSCLRSVS SSVAITIHAKPGSKIASITD
Subjt:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

A0A6J1I6J5 UPF0235 protein C15orf40 homolog2.9e-1791.07Show/hide
Query:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD
        M PAKKGKTKAPKATESIQSS+K NNYPSCLRSVS SS+AITIHAKPGSKIASITD
Subjt:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49170.1 Protein of unknown function (DUF167)2.9e-0958.62Show/hide
Query:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDLT
        M P KKGK K   A ES  +  +++++P+CLR ++PSSVAITIHAKPGSK ASITD++
Subjt:  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTTGACTCATTGAATGGGCTTAAATCTAAACAAAACTATGCCAGCGCTCGCAAAATTCCGTTTGATTTGGGAAAGAAAATGCCTCCGGCGAAGAAGGGGAAAAC
TAAAGCGCCGAAAGCTACTGAATCAATTCAATCCTCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAA
AGCCTGGCTCCAAGATCGCCTCTATCACAGACTTGACGATGATGCGTTGGGAGTACAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTTGACTCATTGAATGGGCTTAAATCTAAACAAAACTATGCCAGCGCTCGCAAAATTCCGTTTGATTTGGGAAAGAAAATGCCTCCGGCGAAGAAGGGGAAAAC
TAAAGCGCCGAAAGCTACTGAATCAATTCAATCCTCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAA
AGCCTGGCTCCAAGATCGCCTCTATCACAGACTTGACGATGATGCGTTGGGAGTACAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACA
TGAGCTCTGTTTTAGGTGTCAAAGAAGACAAGTATCCATAGGTTCTGGCTCCAAATCAAGAGCAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGC
TTTGATACAGCTTTAACATGTGAGTGATTCTATGGCTCTTTGGAAGTTCACACCCTTTAACAGAATATCAGCAATACTGTAATAAGTATATAGGTGGATTACCTTCTACC
TGCTGCCAGAACATTCAAAGTTATACAGCTAAATGTAACTCTTGTATGTTTTCATTTGTCTCAAACCTCAACGATAGTTTACGTGCTGTATATTTGTAGAGTTTCAACTT
TATGGTATGAGCCAAAATATCTTAACTTGACTGCAAGTGATTAATCTTG
Protein sequenceShow/hide protein sequence
MTVDSLNGLKSKQNYASARKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDLTMMRWEYKSTHRPKMEKLMLHFLIT