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IVF0021475 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021475
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPHD finger protein ALFIN-LIKE 3-like
Genome locationchr01:16929288..16929557
RNA-Seq ExpressionIVF0021475
SyntenyIVF0021475
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036625.1 PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo var. makuwa]7.16e-61100Show/hide
Query:  MALVDVIYQVDYSDWLLILSFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
        MALVDVIYQVDYSDWLLILSFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
Subjt:  MALVDVIYQVDYSDWLLILSFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV

XP_004141692.1 PHD finger protein ALFIN-LIKE 3 [Cucumis sativus]9.47e-3384.06Show/hide
Query:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        SFK+  R+AE+QGMYAR+SQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

XP_008462330.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo]1.28e-3384.29Show/hide
Query:  SFK-NFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        SFK NF R+A+ QGMYAR+SQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  SFK-NFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

XP_008462331.1 PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo]7.53e-3282.61Show/hide
Query:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        SFK+  R+A+ QGMYAR+SQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

XP_038897957.1 PHD finger protein ALFIN-LIKE 3-like [Benincasa hispida]7.35e-3282.61Show/hide
Query:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        SFK   R+AE+QGMYAR+ QAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

TrEMBL top hitse value%identityAlignment
A0A0A0K9L1 PHD-type domain-containing protein1.1e-2584.06Show/hide
Query:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        SFK+  R+AE+QGMYAR+SQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

A0A1S3CGR0 PHD finger protein ALFIN-LIKE 3-like isoform X25.3e-2582.61Show/hide
Query:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        SFK+  R+A+ QGMYAR+SQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

A0A1S3CI87 PHD finger protein ALFIN-LIKE 3-like isoform X12.2e-2684.29Show/hide
Query:  SFK-NFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        SFK NF R+A+ QGMYAR+SQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  SFK-NFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

A0A5D3BW61 PHD finger protein ALFIN-LIKE 3-like isoform X11.6e-45100Show/hide
Query:  MALVDVIYQVDYSDWLLILSFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
        MALVDVIYQVDYSDWLLILSFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV
Subjt:  MALVDVIYQVDYSDWLLILSFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV

A0A5D3BXQ0 PHD finger protein ALFIN-LIKE 3-like isoform X25.3e-2582.61Show/hide
Query:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        SFK+  R+A+ QGMYAR+SQAREEVETLYEEDED+H DTLCGAC ENYA DEFWICCDICEKWFHGK V
Subjt:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

SwissProt top hitse value%identityAlignment
B8B8C5 PHD finger protein ALFIN-LIKE 97.6e-1375.68Show/hide
Query:  EDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        E++H +TLCGAC E+Y  DEFWICCDICEKWFHGK V
Subjt:  EDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

O81488 PHD finger protein ALFIN-LIKE 49.0e-1461.54Show/hide
Query:  RSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +    EE E + EEDED+  +T CGAC E+YA DEFWICCD+CE WFHGK V
Subjt:  RSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

Q5XEM9 PHD finger protein ALFIN-LIKE 57.4e-1656.52Show/hide
Query:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        S K  H K E +G+        EE E   +EDED+H +TLCGAC +NYA DEFWICCD+CEKWFHG+ V
Subjt:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

Q9FFF5 PHD finger protein ALFIN-LIKE 19.0e-1462.22Show/hide
Query:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +E  YE+++D+H DTLCG+C  NY  DEFWICCD+CE+W+HGK V
Subjt:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

Q9M2B4 PHD finger protein ALFIN-LIKE 36.3e-1556.9Show/hide
Query:  QGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +G  ++  Q +EE E + E+DED H +TLCGAC ++   DEFWICCD+CEKWFHGK V
Subjt:  QGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

Arabidopsis top hitse value%identityAlignment
AT3G42790.1 alfin-like 34.4e-1656.9Show/hide
Query:  QGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +G  ++  Q +EE E + E+DED H +TLCGAC ++   DEFWICCD+CEKWFHGK V
Subjt:  QGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

AT5G05610.1 alfin-like 16.4e-1562.22Show/hide
Query:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +E  YE+++D+H DTLCG+C  NY  DEFWICCD+CE+W+HGK V
Subjt:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

AT5G05610.2 alfin-like 16.4e-1562.22Show/hide
Query:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +E  YE+++D+H DTLCG+C  NY  DEFWICCD+CE+W+HGK V
Subjt:  VETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

AT5G20510.1 alfin-like 55.2e-1756.52Show/hide
Query:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        S K  H K E +G+        EE E   +EDED+H +TLCGAC +NYA DEFWICCD+CEKWFHG+ V
Subjt:  SFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV

AT5G26210.1 alfin-like 46.4e-1561.54Show/hide
Query:  RSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV
        +    EE E + EEDED+  +T CGAC E+YA DEFWICCD+CE WFHGK V
Subjt:  RSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTGTTGATGTGATTTACCAGGTTGATTACTCAGATTGGTTACTTATTCTATCTTTCAAGAATTTTCATAGGAAAGCTGAATTGCAAGGAATGTATGCAAGACG
GTCGCAGGCAAGGGAAGAGGTAGAGACGTTGTATGAAGAAGATGAAGACAAGCACAATGACACCTTATGTGGGGCATGCGATGAGAATTATGCTTTAGATGAATTTTGGA
TTTGTTGTGATATCTGTGAGAAATGGTTCCATGGAAAATTTGTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTGTTGATGTGATTTACCAGGTTGATTACTCAGATTGGTTACTTATTCTATCTTTCAAGAATTTTCATAGGAAAGCTGAATTGCAAGGAATGTATGCAAGACG
GTCGCAGGCAAGGGAAGAGGTAGAGACGTTGTATGAAGAAGATGAAGACAAGCACAATGACACCTTATGTGGGGCATGCGATGAGAATTATGCTTTAGATGAATTTTGGA
TTTGTTGTGATATCTGTGAGAAATGGTTCCATGGAAAATTTGTTGTATGA
Protein sequenceShow/hide protein sequence
MALVDVIYQVDYSDWLLILSFKNFHRKAELQGMYARRSQAREEVETLYEEDEDKHNDTLCGACDENYALDEFWICCDICEKWFHGKFVV