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IVF0021515 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021515
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr01:15778605..15779195
RNA-Seq ExpressionIVF0021515
SyntenyIVF0021515
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.82e-11289.23Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVN QRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIA+LHEE+EA+KVCI  LKHEIE+LNG+ LEFQNAL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
        HEQ+ SSQQTA+ IEVLQHSI+EYKSQ IEA+SKN FLQK VNSSESQLLICRKAREV+TDDYAQL+EKYQEM IDFMMWKDEYETLRRKYDDAI
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI

KAA0049672.1 uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa]1.36e-9083.08Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK                        
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
                 TAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.93e-11389.29Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQ+RKKNKRLLRNIA+LHEE+EAKKVCI  LKHEIE+LNG+ALEFQNAL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAIG
        HEQ+ SSQQTA+ IEVLQH I+EYKSQ IEA SKN FLQK VNSSESQLLICRKAREV+ DDYAQL+EKYQEM IDFMMWKDEYETLRRKYDDAIG
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAIG

TYK12200.1 uncharacterized protein E5676_scaffold106G001510 [Cucumis melo var. makuwa]9.14e-9183.08Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK                        
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
                 TAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI

XP_008464352.1 PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]1.33e-9883.08Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIA+LHEE+EA+K                  EFQNAL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
        HEQ+ SSQQTA+ IEVLQHSI+EYKSQ IEA+SKN FLQK VNSSESQLLICRKAREV+TDDYAQL+EKYQEM IDFMMWKDEYETLRRKYDDAI
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI

TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like5.9e-7783.08Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIA+LHEE+EA+K                  EFQNAL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
        HEQ+ SSQQTA+ IEVLQHSI+EYKSQ IEA+SKN FLQK VNSSESQLLICRKAREV+TDDYAQL+EKYQEM IDFMMWKDEYETLRRKYDDAI
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI

A0A5A7SM49 Glial fibrillary acidic protein-like2.2e-8789.23Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVN QRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIA+LHEE+EA+KVCI  LKHEIE+LNG+ LEFQNAL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
        HEQ+ SSQQTA+ IEVLQHSI+EYKSQ IEA+SKN FLQK VNSSESQLLICRKAREV+TDDYAQL+EKYQEM IDFMMWKDEYETLRRKYDDAI
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI

A0A5A7U1L8 Retrotrans_gag domain-containing protein2.1e-7483.08Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK                        
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
                 TAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI

A0A5A7VDD9 Glial fibrillary acidic protein-like7.4e-8889.29Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQ+RKKNKRLLRNIA+LHEE+EAKKVCI  LKHEIE+LNG+ALEFQNAL
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAIG
        HEQ+ SSQQTA+ IEVLQH I+EYKSQ IEA SKN FLQK VNSSESQLLICRKAREV+ DDYAQL+EKYQEM IDFMMWKDEYETLRRKYDDAIG
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAIG

A0A5D3CLA9 Retrotrans_gag domain-containing protein2.1e-7483.08Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL
        MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKK                        
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNAL

Query:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
                 TAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI
Subjt:  HEQSTSSQQTAIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCGAAACGAAAACG
ATTGGAGTTGGAGAAGGAAAACGATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCGACTTACATGAAGAGATGGAAG
CTAAAAAGGTATGCATTATATATTTGAAACATGAAATAGAAAGATTGAATGGGGTTGCCTTAGAATTTCAAAATGCATTACATGAACAATCCACGTCATCTCAACAGACC
GCTATAGAAATTGAGGTTCTACAACATTCGATTAAAGAATACAAATCCCAATTTATAGAAGCGAAAAGCAAAAACAGATTTTTGCAAAAAGTCGTTAACAGTTCTGAAAG
CCAGTTGCTAATATGTCGCAAAGCAAGGGAAGTCGTAACAGATGACTATGCTCAATTAATAGAAAAATATCAAGAAATGTTGATAGATTTCATGATGTGGAAGGACGAGT
ACGAGACATTGAGACGTAAGTATGATGATGCTATAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCGAAACGAAAACG
ATTGGAGTTGGAGAAGGAAAACGATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCGACTTACATGAAGAGATGGAAG
CTAAAAAGGTATGCATTATATATTTGAAACATGAAATAGAAAGATTGAATGGGGTTGCCTTAGAATTTCAAAATGCATTACATGAACAATCCACGTCATCTCAACAGACC
GCTATAGAAATTGAGGTTCTACAACATTCGATTAAAGAATACAAATCCCAATTTATAGAAGCGAAAAGCAAAAACAGATTTTTGCAAAAAGTCGTTAACAGTTCTGAAAG
CCAGTTGCTAATATGTCGCAAAGCAAGGGAAGTCGTAACAGATGACTATGCTCAATTAATAGAAAAATATCAAGAAATGTTGATAGATTTCATGATGTGGAAGGACGAGT
ACGAGACATTGAGACGTAAGTATGATGATGCTATAGGTTAG
Protein sequenceShow/hide protein sequence
MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIADLHEEMEAKKVCIIYLKHEIERLNGVALEFQNALHEQSTSSQQT
AIEIEVLQHSIKEYKSQFIEAKSKNRFLQKVVNSSESQLLICRKAREVVTDDYAQLIEKYQEMLIDFMMWKDEYETLRRKYDDAIG