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IVF0021534 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021534
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein Ycf2
Genome locationtig00000662:5595..5747
RNA-Seq ExpressionIVF0021534
SyntenyIVF0021534
Gene Ontology termsGO:0009536 - plastid (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHT98337.1 Protein Ycf2 [Capsicum chinense]1.84e-0681.25Show/hide
Query:  LEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK
        +EYQSHR H+ +TKSHQSN FFEKYETSKSYK
Subjt:  LEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK
QDF64401.1 hypothetical chloroplast RF21 [Teucrium stocksianum subsp. stenophyllum]3.66e-1275.51Show/hide
Query:  WRSRLW-GQINTFEEERLEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK
        WR   W GQINTF EE  E QSHR H+ HTKSHQSN FFEKYETSKSYK
Subjt:  WRSRLW-GQINTFEEERLEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK
TrEMBL top hitse value%identityAlignment
A0A2G3AVS5 Protein Ycf22.2e-0481.25Show/hide
Query:  LEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK
        +EYQSHR H+ +TKSHQSN FFEKYETSKSYK
Subjt:  LEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK
A0A4Y6I4X1 Hypothetical chloroplast RF213.9e-0975.51Show/hide
Query:  WRSRL-WGQINTFEEERLEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK
        WR    WGQINTF EE  E QSHR H+ HTKSHQSN FFEKYETSKSYK
Subjt:  WRSRL-WGQINTFEEERLEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATCGAA
TCGCTTTTTCGAGAAATACGAGACATCTAAGTCATACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCAATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATCGAA
TCGCTTTTTCGAGAAATACGAGACATCTAAGTCATACAAGTAA
Protein sequenceShow/hide protein sequence
MGWRSRLWGQINTFEEERLEYQSHRSHKYHTKSHQSNRFFEKYETSKSYK