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IVF0021545 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021545
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:14963460..14963826
RNA-Seq ExpressionIVF0021545
SyntenyIVF0021545
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044959.1 hypothetical protein E6C27_scaffold74G002650 [Cucumis melo var. makuwa]1.52e-1861.97Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTK------VSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP
        MT TL+EE+KEHKDESDS+KSDRHWK PLKK K      + GLIE+GS+ESL GPHVVDS   ++   + P
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTK------VSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP

KAA0054196.1 hypothetical protein E6C27_scaffold131G001330 [Cucumis melo var. makuwa]1.46e-1960.81Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVS-------GLIEIGSNESLMGPHVVDSPLRKLVPRRLPSL
        M ATL+EE+KEHKDESD  KSDRHWK PLKK KVS       GLIE+G++ESL GPH VDS + K+   + P L
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVS-------GLIEIGSNESLMGPHVVDSPLRKLVPRRLPSL

KAA0054546.1 hypothetical protein E6C27_scaffold24G003300 [Cucumis melo var. makuwa]4.66e-1755.41Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSG---------LIEIGSNESLMGPHVVDSPLRKLVPRRLP
        M  TL+EE+KEHKDESDS KSD HWK PLKK KVSG         LIE+ S+ESL GPH +DS  +++   + P
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSG---------LIEIGSNESLMGPHVVDSPLRKLVPRRLP

TYK01669.1 hypothetical protein E5676_scaffold517G00020 [Cucumis melo var. makuwa]2.43e-1761.54Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP
        M ATL+EEI EHKDESDS KSD HWK PLKK  V GLIE+GS+ESL  PH +DS + ++   + P
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP

TYK02510.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.71e-2788.06Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSG-------LIEIGSNESLMGPHVVDSPLRKLV
        MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSG       LIEIGSNESLMGPHVVDSPLRKL+
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSG-------LIEIGSNESLMGPHVVDSPLRKLV

TrEMBL top hitse value%identityAlignment
A0A5A7SL07 Uncharacterized protein7.9e-1361.54Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP
        M ATL+EEI EHKDESDS KSD HWK PLKK  V GLIE+GS+ESL  PH +DS + ++   + P
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP

A0A5A7TUP1 Uncharacterized protein3.2e-1461.97Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTK------VSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP
        MT TL+EE+KEHKDESDS+KSDRHWK PLKK K      + GLIE+GS+ESL GPHVVDS   ++   + P
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTK------VSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP

A0A5A7UIU2 Uncharacterized protein5.5e-1460.81Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVS-------GLIEIGSNESLMGPHVVDSPLRKLVPRRLPSL
        M ATL+EE+KEHKDESD  KSDRHWK PLKK KVS       GLIE+G++ESL GPH VDS + K+   + P L
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVS-------GLIEIGSNESLMGPHVVDSPLRKLVPRRLPSL

A0A5D3BTQ8 Putative mitochondrial protein3.2e-2288.06Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVS-------GLIEIGSNESLMGPHVVDSPLRKLV
        MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVS       GLIEIGSNESLMGPHVVDSPLRKL+
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVS-------GLIEIGSNESLMGPHVVDSPLRKLV

A0A5D3BU95 Uncharacterized protein7.9e-1361.54Show/hide
Query:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP
        M ATL+EEI EHKDESDS KSD HWK PLKK  V GLIE+GS+ESL  PH +DS + ++   + P
Subjt:  MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSGLIEIGSNESLMGPHVVDSPLRKLVPRRLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTACTCTCGATGAGGAGATAAAGGAGCATAAAGATGAAAGCGATAGCGACAAAAGTGATCGTCATTGGAAGATACCTTTGAAGAAAACGAAGGTATCAGGCCT
TATAGAGATAGGCAGCAATGAATCTTTGATGGGACCTCATGTAGTTGATTCTCCATTGAGGAAGTTGGTACCTCGAAGACTCCCATCTCTAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGCTACTCTCGATGAGGAGATAAAGGAGCATAAAGATGAAAGCGATAGCGACAAAAGTGATCGTCATTGGAAGATACCTTTGAAGAAAACGAAGGTATCAGGCCT
TATAGAGATAGGCAGCAATGAATCTTTGATGGGACCTCATGTAGTTGATTCTCCATTGAGGAAGTTGGTACCTCGAAGACTCCCATCTCTAAACTAG
Protein sequenceShow/hide protein sequence
MTATLDEEIKEHKDESDSDKSDRHWKIPLKKTKVSGLIEIGSNESLMGPHVVDSPLRKLVPRRLPSLN