CuGenDBv2

Gene ID	IVF0021548
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein FAR1-RELATED SEQUENCE 4
Genome location	chr10:13726490..13726962
RNA-Seq Expression	IVF0021548
Synteny	IVF0021548
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033561.1 uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa]

2.46e-52

83.65

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MS D S  KEIVHKAR NLGVNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SNP      EMDDSGHF FCFM FGASIEGWKYCRPIISV 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

6.73e-53

82.69

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MST+RS   EIVHKAR NLG+NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP      EMDDSGHF FCFM FGASIEGWKYC+PII V 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

KAA0041797.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]

2.56e-54

83.65

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MS DRS  KEIVHK R NLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP      E+DD GHF FCFM FGASIEGWKYCRPIISV 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

TYJ99762.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

6.67e-54

84.16

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MSTDRS +KEIVHK RINLGVNISYQKAWR KEHMVKILHGDTVESYALIPR FDK VESNP      EMDDSGHF FCFM FGA IEGWKYCRPIISV 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  G
        G
Subjt:  G

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]

7.09e-54

82.69

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MST+RS   EIVHKAR NLG+NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP      EMDDSGHF FCFM FGASIEGWKYC+PII V 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SVW4 Uncharacterized protein

1.5e-41

83.65

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MS D S  KEIVHKAR NLGVNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SNP      EMDDSGHF FCFM FGASIEGWKYCRPIISV 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 4

2.6e-41

82.69

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MST+RS   EIVHKAR NLG+NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP      EMDDSGHF FCFM FGASIEGWKYC+PII V 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

A0A5A7TJB7 Protein FAR1-RELATED SEQUENCE 2-like

1.2e-41

83.65

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MS DRS  KEIVHK R NLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP      E+DD GHF FCFM FGASIEGWKYCRPIISV 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

A0A5D3B9S0 Uncharacterized protein

1.5e-41

83.65

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MS D S  KEIVHKAR NLGVNISY+KAWRAKEHMVKILHGDTVESYALIPRFFDKLV+SNP      EMDDSGHF FCFM FGASIEGWKYCRPIISV 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 4

2.6e-41

82.69

Show/hide

Query:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY
        MST+RS   EIVHKAR NLG+NISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP      EMDDSGHF FCFM FGASIEGWKYC+PII V 
Subjt:  MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNP------EMDDSGHFNFCFMTFGASIEGWKYCRPIISVY

Query:  GIFL
        G FL
Subjt:  GIFL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64260.1 MuDR family transposase

5.6e-04

27.38

Show/hide

Query:  GVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPEM----------DDSGHFNFCFMTFGASIEGWKYCRPIISV
        G  +   K    K  ++K + GD  +S+ ++P+       SN  +           D   F   F +F  SIEG+++CRP+I V
Subjt:  GVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPEM----------DDSGHFNFCFMTFGASIEGWKYCRPIISV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTACTGATCGTTCATTTTCTAAAGAGATTGTGCATAAGGCTCGTATAAATCTTGGAGTTAATATAAGTTACCAAAAAGCTTGGAGGGCAAAAGAACATATGGTAAA
GATATTACATGGTGACACAGTTGAATCGTATGCCTTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAGAAATGGATGATAGTGGTCATTTCAATTTTTGTT
TTATGACTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTTATGGGATATTTTTGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSTDRSFSKEIVHKARINLGVNISYQKAWRAKEHMVKILHGDTVESYALIPRFFDKLVESNPEMDDSGHFNFCFMTFGASIEGWKYCRPIISVYGIFL

IVF0021548 (gene) of Melon (IVF77) v1 genome