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IVF0021581 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021581
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:18851036..18851416
RNA-Seq ExpressionIVF0021581
SyntenyIVF0021581
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.03e-3860.99Show/hide
Query:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT---------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
        EEVPP+TQT+SE +YVSP++MM  FGT YYD GV QSSDFG GYYN                 G++PSSSYMHGHGRGRGEHNEYLYY  PAAV E+ NE
Subjt:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT---------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE

Query:  ---------------QQQQENQEELQQQRVQSRRGQPTKNR
                       QQQQENQEE+QQQRVQSRR QP +NR
Subjt:  ---------------QQQQENQEELQQQRVQSRRGQPTKNR

KAA0051098.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.99e-6388.89Show/hide
Query:  MEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLTG--------------TNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
        MEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLTG              TNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
Subjt:  MEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLTG--------------TNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE

Query:  QQQQENQEELQQQRVQSRRGQPTKNR
        QQQQENQEELQQQRVQSRRGQPTKNR
Subjt:  QQQQENQEELQQQRVQSRRGQPTKNR

KAA0051227.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.64e-4065.87Show/hide
Query:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT---------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
        EEVPPVTQT+S+  YVSP++MM AF T YYD GV QSSDFGTGYYN                 G++ SSSYMH HGRGRGEHNEYLYY  PAA+ E+ +E
Subjt:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT---------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE

Query:  QQQQENQEELQQQRVQSRRGQPTKNR
        QQQQENQEE+QQQRVQSR  QPT+NR
Subjt:  QQQQENQEELQQQRVQSRRGQPTKNR

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.83e-3860.99Show/hide
Query:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT---------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
        EEVPP+TQTKSE +YVSP++MM  FGT YYD GV QSSDFG GYYN                 G++PSSSYMHGHGRGRGEHNEYLYY  PAAV E+ +E
Subjt:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT---------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE

Query:  ---------------QQQQENQEELQQQRVQSRRGQPTKNR
                       QQQQENQEE+QQQRVQSRR QP +NR
Subjt:  ---------------QQQQENQEELQQQRVQSRRGQPTKNR

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.38e-3960.14Show/hide
Query:  EEVPPVTQTK--SETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT---------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEP
        EEVPP+TQT+  SE +YVSP++MM  FGT YYD GV QSSDFG GYYN                 G++PSSSYMHGHGRGRGEHNEYLYY  PAAV E+ 
Subjt:  EEVPPVTQTK--SETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT---------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEP

Query:  NE---------------QQQQENQEELQQQRVQSRRGQPTKNR
        NE               QQQQENQEE+QQQRVQSRR QP +NR
Subjt:  NE---------------QQQQENQEELQQQRVQSRRGQPTKNR

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein5.6e-3260.99Show/hide
Query:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNL---------------TGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPN-
        EEVPP+TQT+SE +YVSP++MM  FGT YYD GV QSSDFG GYYN                 G++PSSSYMHGHGRGRGEHNEYLYY  PAAV E+ N 
Subjt:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNL---------------TGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPN-

Query:  --------------EQQQQENQEELQQQRVQSRRGQPTKNR
                      EQQQQENQEE+QQQRVQSRR QP +NR
Subjt:  --------------EQQQQENQEELQQQRVQSRRGQPTKNR

A0A5A7U731 Serine/threonine-protein phosphatase 7 long form-like protein4.6e-5088.89Show/hide
Query:  MEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT--------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
        MEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT              GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
Subjt:  MEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLT--------------GTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE

Query:  QQQQENQEELQQQRVQSRRGQPTKNR
        QQQQENQEELQQQRVQSRRGQPTKNR
Subjt:  QQQQENQEELQQQRVQSRRGQPTKNR

A0A5A7U9Y2 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.2e-3165.87Show/hide
Query:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNL---------------TGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
        EEVPPVTQT+S+  YVSP++MM AF T YYD GV QSSDFGTGYYN                 G++ SSSYMH HGRGRGEHNEYLYY  PAA+ E+ +E
Subjt:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNL---------------TGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE

Query:  QQQQENQEELQQQRVQSRRGQPTKNR
        QQQQENQEE+QQQRVQSR  QPT+NR
Subjt:  QQQQENQEELQQQRVQSRRGQPTKNR

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein7.4e-3260.99Show/hide
Query:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNL---------------TGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE
        EEVPP+TQTKSE +YVSP++MM  FGT YYD GV QSSDFG GYYN                 G++PSSSYMHGHGRGRGEHNEYLYY  PAAV E+ +E
Subjt:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNL---------------TGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNE

Query:  ---------------QQQQENQEELQQQRVQSRRGQPTKNR
                       QQQQENQEE+QQQRVQSRR QP +NR
Subjt:  ---------------QQQQENQEELQQQRVQSRRGQPTKNR

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.8e-3160.28Show/hide
Query:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNL---------------TGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPN-
        EEVPP+TQT+SE +YVSP++MM  FGT YYD  V QSSDFG GYYN                 G++PSSSYMHGHGRGRGEHNEYLYY  PAAV E+ N 
Subjt:  EEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNL---------------TGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPN-

Query:  --------------EQQQQENQEELQQQRVQSRRGQPTKNR
                      EQQQQENQEE+QQQRVQSRR QP +NR
Subjt:  --------------EQQQQENQEELQQQRVQSRRGQPTKNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGTGCCTCCTGTCACACAAACAAAGAGCGAGACTAGTTACGTTAGTCCAATGATAATGATGTCGGCGTTTGGAACGGGATATTATGATCCAGGAGTCAGTCA
ATCGTCAGACTTCGGAACAGGATATTACAATTTGACAGGGACCAATCCATCATCTTCATACATGCATGGTCACGGACGTGGTCGTGGAGAACATAACGAATATTTATACT
ACGTAGCGCCTGCAGCGGTATCCGAGGAACCAAATGAGCAACAACAACAAGAGAATCAGGAGGAACTACAACAACAAAGAGTGCAGAGTCGACGAGGACAACCGACTAAA
AATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGTGCCTCCTGTCACACAAACAAAGAGCGAGACTAGTTACGTTAGTCCAATGATAATGATGTCGGCGTTTGGAACGGGATATTATGATCCAGGAGTCAGTCA
ATCGTCAGACTTCGGAACAGGATATTACAATTTGACAGGGACCAATCCATCATCTTCATACATGCATGGTCACGGACGTGGTCGTGGAGAACATAACGAATATTTATACT
ACGTAGCGCCTGCAGCGGTATCCGAGGAACCAAATGAGCAACAACAACAAGAGAATCAGGAGGAACTACAACAACAAAGAGTGCAGAGTCGACGAGGACAACCGACTAAA
AATCGTTGA
Protein sequenceShow/hide protein sequence
MEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQSSDFGTGYYNLTGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEPNEQQQQENQEELQQQRVQSRRGQPTK
NR