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IVF0021584 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021584
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein Ycf2-like
Genome locationchr03:2514249..2522102
RNA-Seq ExpressionIVF0021584
SyntenyIVF0021584
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037803.1 protein Ycf2-like [Cucumis melo var. makuwa]2.23e-1968.75Show/hide
Query:  VKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDEL
        VKAIKK ++ ++ +  + KAPMKP+KSELEVSPMLA P +VG PYFAPF+E++KDILKEAEDEL
Subjt:  VKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDEL

KAA0056158.1 protein Ycf2-like [Cucumis melo var. makuwa]7.22e-1940.54Show/hide
Query:  KDEKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDEV---KAIKKNKRQKKIKEGREKA-----------------------------------
        K +K + E RTRTSD+LRA GITGSKKRL TGIQTLSSSSDEV   +  K+   +KK KE  EK                                    
Subjt:  KDEKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDEV---KAIKKNKRQKKIKEGREKA-----------------------------------

Query:  --------------------------------------PMKP---DKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDEL
                                               +K    D   LEVSPMLA PNEV RPYFAPFL+ KKDILKEAEDEL
Subjt:  --------------------------------------PMKP---DKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDEL

KAA0060857.1 protein Ycf2-like [Cucumis melo var. makuwa]1.97e-1936.05Show/hide
Query:  EKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDEV----------------------KAIKKNKRQKKIKEGREKAPMKPDKSE----------
        +KG+ E RTRTSD+LR+  ITG KKRL+T IQTL SSSDEV                      KAIKKNKRQ+KIK GR  APMK DKSE          
Subjt:  EKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDEV----------------------KAIKKNKRQKKIKEGREKAPMKPDKSE----------

Query:  -------------------------------------------------------------------------------------LEVSPMLAIPNEVGR
                                                                                             LEVS MLA P EVG 
Subjt:  -------------------------------------------------------------------------------------LEVSPMLAIPNEVGR

Query:  PYFAPFLEVKKDILKEAEDELQKIKNFDRIAHV
         YFAPFLE +KDI KE +DEL+K +N DR+AHV
Subjt:  PYFAPFLEVKKDILKEAEDELQKIKNFDRIAHV

TYK02880.1 protein Ycf2-like [Cucumis melo var. makuwa]6.82e-2049.54Show/hide
Query:  KHKDEKGENEARTRTSDQLRAEGI-TGSKKRLTTGIQTLSSSSDEVKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKD
        + +DE+ E E            GI T +KKR     + ++    +VKAIKK ++ ++ +  + KAPMKP+KSELEVSPMLA P +VG PYFAPF+E++KD
Subjt:  KHKDEKGENEARTRTSDQLRAEGI-TGSKKRLTTGIQTLSSSSDEVKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKD

Query:  ILKEAEDEL
        ILKEAEDEL
Subjt:  ILKEAEDEL

TYK07943.1 protein Ycf2-like [Cucumis melo var. makuwa]5.18e-1439.33Show/hide
Query:  KDEKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDEVKA-IKKN---------------------------KRQKKIKEG--------------
        K EKGE   +TRTSD+LR  GITGSKKR   GIQTLSSSSDE+   + KN                           KR   + E               
Subjt:  KDEKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDEVKA-IKKN---------------------------KRQKKIKEG--------------

Query:  ---------------REKAPMKPD---KSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDELQKIKNFDRIAHV
                       R KA   P     + L+  P+LA PNEV R YFAPFL+VKKDILKEA+DEL+K ++ + +A V
Subjt:  ---------------REKAPMKPD---KSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDELQKIKNFDRIAHV

TrEMBL top hitse value%identityAlignment
A0A5A7STD7 Protein Ycf2-like3.1e-1173.08Show/hide
Query:  DKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDELQKIKNFDRIAHV
        D   LEVSPMLA P +VG PYFAPF+E +KDILKEAEDEL+K KN D IAHV
Subjt:  DKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDELQKIKNFDRIAHV

A0A5A7T495 Protein Ycf2-like3.0e-1467.69Show/hide
Query:  EVKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDEL
        +VKAIKK ++ ++ +  + KAPMKP+KSELEVSPMLA P +VG PYFAPF+E++KDILKEAEDEL
Subjt:  EVKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDEL

A0A5A7UM43 Protein Ycf2-like4.7e-1540Show/hide
Query:  KDEKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDEV---KAIKKNKRQKKIKEGREKAPMK--------------------------------
        K +K + E RTRTSD+LRA GITGSKKRL TGIQTLSSSSDEV   +  K+   +KK KE  EK  +                                 
Subjt:  KDEKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDEV---KAIKKNKRQKKIKEGREKAPMK--------------------------------

Query:  --------------------------------------------PDKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDEL
                                                     D   LEVSPMLA PNEV RPYFAPFL+ KKDILKEAEDEL
Subjt:  --------------------------------------------PDKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDEL

A0A5A7V1Y7 Protein Ycf2-like1.2e-1536.05Show/hide
Query:  EKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDE----------------------VKAIKKNKRQKKIKEGREKAPMKPDKSE----------
        +KG+ E RTRTSD+LR+  ITG KKRL+T IQTL SSSDE                      VKAIKKNKRQ+KIK GR  APMK DKSE          
Subjt:  EKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDE----------------------VKAIKKNKRQKKIKEGREKAPMKPDKSE----------

Query:  -------------------------------------------------------------------------------------LEVSPMLAIPNEVGR
                                                                                             LEVS MLA P EVG 
Subjt:  -------------------------------------------------------------------------------------LEVSPMLAIPNEVGR

Query:  PYFAPFLEVKKDILKEAEDELQKIKNFDRIAHV
         YFAPFLE +KDI KE +DEL+K +N DR+AHV
Subjt:  PYFAPFLEVKKDILKEAEDELQKIKNFDRIAHV

A0A5D3BUT1 Protein Ycf2-like3.6e-1549.54Show/hide
Query:  KHKDEKGENEARTRTSDQLRAEGI-TGSKKRLTTGIQTLSSSSDEVKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKD
        + +DE+ E E            GI T +KKR     + ++    +VKAIKK ++ ++ +  + KAPMKP+KSELEVSPMLA P +VG PYFAPF+E++KD
Subjt:  KHKDEKGENEARTRTSDQLRAEGI-TGSKKRLTTGIQTLSSSSDEVKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKD

Query:  ILKEAEDEL
        ILKEAEDEL
Subjt:  ILKEAEDEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAATTGCCATTGTGCTACTGCGGATTTTTGTAATAAACAAGCTCTTTTGTCCCGCCATATCTTTGTAGCATCACATCTTCGTTCCCTTTGGTTCTCTATTCGTCG
TTCCTCATTTTTCCGTTCACCGTTCCTCACTTGGCTTTGCTTCTTAAGGCTCGCATCTTCAATCTTCAGGTTTCTCCAAATCTTCAGAAAACATAAAGATGAAAAGGGGG
AAAATGAGGCTAGAACGAGAACAAGTGATCAGTTAAGAGCCGAAGGGATCACTGGTTCGAAGAAACGATTGACAACGGGAATTCAAACTCTGTCAAGTTCTTCGGACGAG
GTAAAGGCTATTAAAAAAAATAAAAGGCAAAAGAAGATCAAAGAAGGAAGGGAAAAAGCACCAATGAAACCGGATAAATCTGAGCTTGAAGTGTCCCCCATGCTCGCCAT
ACCAAATGAAGTGGGAAGACCATACTTTGCACCATTCCTCGAGGTGAAAAAAGATATACTCAAAGAAGCAGAAGATGAGCTCCAAAAGATCAAAAATTTTGACCGTATTG
CCCATGTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAATTGCCATTGTGCTACTGCGGATTTTTGTAATAAACAAGCTCTTTTGTCCCGCCATATCTTTGTAGCATCACATCTTCGTTCCCTTTGGTTCTCTATTCGTCG
TTCCTCATTTTTCCGTTCACCGTTCCTCACTTGGCTTTGCTTCTTAAGGCTCGCATCTTCAATCTTCAGGTTTCTCCAAATCTTCAGAAAACATAAAGATGAAAAGGGGG
AAAATGAGGCTAGAACGAGAACAAGTGATCAGTTAAGAGCCGAAGGGATCACTGGTTCGAAGAAACGATTGACAACGGGAATTCAAACTCTGTCAAGTTCTTCGGACGAG
GTAAAGGCTATTAAAAAAAATAAAAGGCAAAAGAAGATCAAAGAAGGAAGGGAAAAAGCACCAATGAAACCGGATAAATCTGAGCTTGAAGTGTCCCCCATGCTCGCCAT
ACCAAATGAAGTGGGAAGACCATACTTTGCACCATTCCTCGAGGTGAAAAAAGATATACTCAAAGAAGCAGAAGATGAGCTCCAAAAGATCAAAAATTTTGACCGTATTG
CCCATGTTTTCTGA
Protein sequenceShow/hide protein sequence
MRNCHCATADFCNKQALLSRHIFVASHLRSLWFSIRRSSFFRSPFLTWLCFLRLASSIFRFLQIFRKHKDEKGENEARTRTSDQLRAEGITGSKKRLTTGIQTLSSSSDE
VKAIKKNKRQKKIKEGREKAPMKPDKSELEVSPMLAIPNEVGRPYFAPFLEVKKDILKEAEDELQKIKNFDRIAHVF