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IVF0021590 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021590
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr08:27225177..27225519
RNA-Seq ExpressionIVF0021590
SyntenyIVF0021590
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025749.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]9.28e-2665.88Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIEGGSSISL
        ME ESSN+KKNEASKE KEKS+ +QCWKC+GFGHMSKD                  EC EHDAP EEESDAHD+EYIEGGSSI L
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIEGGSSISL

KAA0057648.1 putative polyprotein [Cucumis melo var. makuwa]6.72e-1759.3Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAH-DEEYIEGGSSISL
        +ETESSNTKK EASKEV+EK+S IQCWKC+GFGHMSKD                  EC E+DA  EEE +   D+EYIE GSSISL
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAH-DEEYIEGGSSISL

KGN53753.1 hypothetical protein Csa_014547 [Cucumis sativus]6.48e-2364.1Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIE
        ME ESSNTK N+ SKEVKEKSS I+CWKC+G GHMSKDY                 EC EHDAP EEESDAHD+EYIE
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIE

TYK06180.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.94e-2464.71Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIEGGSSISL
        ME ESSN+KKNEASKE KEKS+ +QCWKC+GFGHMSKD                  E  EHDAP EEESDAHD+EYIEGGSSI L
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIEGGSSISL

TYK08101.1 uncharacterized protein E5676_scaffold265G002620 [Cucumis melo var. makuwa]6.60e-1759.3Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAH-DEEYIEGGSSISL
        +ETESSNTKK EASKEV+EK+S IQCWKC+GFGHMSKD                  EC E+DA  EEE +   D+EYIE GSSISL
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAH-DEEYIEGGSSISL

TrEMBL top hitse value%identityAlignment
A0A0A0KW07 Uncharacterized protein2.1e-1664.1Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIE
        ME ESSNTK N+ SKEVKEKSS I+CWKC+G GHMSKDY                 EC EHDAP EEESDAHD+EYIE
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIE

A0A5A7SKE7 Transposon Ty3-I Gag-Pol polyprotein1.6e-1965.88Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIEGGSSISL
        ME ESSN+KKNEASKE KEKS+ +QCWKC+GFGHMSKD                  EC EHDAP EEESDAHD+EYIEGGSSI L
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIEGGSSISL

A0A5A7UR86 Putative polyprotein1.7e-1359.3Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAH-DEEYIEGGSSISL
        +ETESSNTKK EASKEV+EK+S IQCWKC+GFGHMSKD                  EC E+DA  EEE +   D+EYIE GSSISL
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAH-DEEYIEGGSSISL

A0A5D3C4C3 Transposon Ty3-I Gag-Pol polyprotein2.3e-1864.71Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIEGGSSISL
        ME ESSN+KKNEASKE KEKS+ +QCWKC+GFGHMSKD                  E  EHDAP EEESDAHD+EYIEGGSSI L
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAHDEEYIEGGSSISL

A0A5D3C8C6 CCHC-type domain-containing protein1.7e-1359.3Show/hide
Query:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAH-DEEYIEGGSSISL
        +ETESSNTKK EASKEV+EK+S IQCWKC+GFGHMSKD                  EC E+DA  EEE +   D+EYIE GSSISL
Subjt:  METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDY-----------------ECHEHDAPFEEESDAH-DEEYIEGGSSISL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCGAGAGCTCCAACACTAAAAAGAATGAAGCTTCAAAAGAGGTAAAGGAGAAGTCTAGTATCATTCAATGTTGGAAGTGCAGAGGGTTTGGACACATGAGCAA
AGATTACGAATGTCATGAGCATGATGCACCATTTGAGGAAGAATCCGATGCACATGATGAAGAGTACATTGAAGGAGGTAGCTCTATATCCTTAAGAATGCTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCGAGAGCTCCAACACTAAAAAGAATGAAGCTTCAAAAGAGGTAAAGGAGAAGTCTAGTATCATTCAATGTTGGAAGTGCAGAGGGTTTGGACACATGAGCAA
AGATTACGAATGTCATGAGCATGATGCACCATTTGAGGAAGAATCCGATGCACATGATGAAGAGTACATTGAAGGAGGTAGCTCTATATCCTTAAGAATGCTTGATTGA
Protein sequenceShow/hide protein sequence
METESSNTKKNEASKEVKEKSSIIQCWKCRGFGHMSKDYECHEHDAPFEEESDAHDEEYIEGGSSISLRMLD