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IVF0021610 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021610
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr09:5160869..5166787
RNA-Seq ExpressionIVF0021610
SyntenyIVF0021610
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037851.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]5.91e-6667.63Show/hide
Query:  GTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVG
        GTLRKQSSG + RTHQSRDPEGCTYQSSDPEGYTYQ SDPEGCTYQSSDPEGCTYQSSD +GYTYPS                                 
Subjt:  GTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVG

Query:  LESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG
               GQLETRATTSD LRRS TGTLRGLEE DDRL FNAAE +WASTDTVGRRT GGVR+RE ER+IGDG
Subjt:  LESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG

KAA0039625.1 pol protein [Cucumis melo var. makuwa]1.65e-8777.32Show/hide
Query:  TGTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRV
        +GTLRK+SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG TYQSSDPEGCTYQSSDP+GYTY S         G T        RLN D RLES+V
Subjt:  TGTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRV

Query:  GLESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDGWAA-TNERWSCEVADNGDGD
        GLE+GLGSGQLET ATTSDGLRRSTTGTLRGLEESDDRLRFN AESDWAS DTVGRRTHG VRLRETERE  +G  A T + WSCE  D+GDGD
Subjt:  GLESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDGWAA-TNERWSCEVADNGDGD

KAA0045596.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]5.94e-3755.75Show/hide
Query:  WSKKDNTVH---CHTMRRATQTG-------TLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAA
        W+   N  H    H++R     G       T +  SSG VERTHQSRDPEGCTYQSSDPE  TYQSSDPEGCTYQSSDPEGCTYQSSDP+G TY S    
Subjt:  WSKKDNTVH---CHTMRRATQTG-------TLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAA

Query:  HGSVF------GLTRLAA-----RLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTTGTLRGLEES
         G  +      G T  ++            SD +  S     S L SGQLET ATTSDGLRRSTTGTLRGLEES
Subjt:  HGSVF------GLTRLAA-----RLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTTGTLRGLEES

KAA0060052.1 gag/pol protein [Cucumis melo var. makuwa]2.11e-5165.66Show/hide
Query:  KQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG----------CTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLA-ARLSLRLNSDF
        ++SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG          C YQSSDPEGCTYQSSDP+GYTYP    +         L  A LS   +++ 
Subjt:  KQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG----------CTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLA-ARLSLRLNSDF

Query:  RLESRVGLESG------LGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTV
          ++  GL         LGSGQLET ATTSDGLRRSTTGTL GLEESDDRLRFNAAE DWASTDTV
Subjt:  RLESRVGLESG------LGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTV

TYK08879.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]9.96e-3753.33Show/hide
Query:  SSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTY-PSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGL
        SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDP GCTYQSSDP G TY PS   + G  +    L+   S     +  + S +   +G 
Subjt:  SSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTY-PSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGL

Query:  GSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREI
           +LE R         ST    R +            +S WAS DTVGRR HGGV LRETER +
Subjt:  GSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREI

TrEMBL top hitse value%identityAlignment
A0A5A7T8C3 NBS-LRR type resistance protein6.8e-5167.63Show/hide
Query:  GTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVG
        GTLRKQSSG + RTHQSRDPEGCTYQSSDPEGYTYQ SDPEGCTYQSSDPEGCTYQSSD +GYTYP                                  
Subjt:  GTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVG

Query:  LESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG
              SGQLETRATTSD LRRS TGTLRGLEE DDRL FNAAE +WASTDTVGRRT GGVR+RE ER+IGDG
Subjt:  LESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG

A0A5A7TDW4 Pol protein5.0e-7075Show/hide
Query:  TGTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRV
        +GTLRK+SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEG TYQSSDPEGCTYQSSDP+GYTY S         G T        RLN D RLES+V
Subjt:  TGTLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRV

Query:  GLESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREI-GDGWAATNERWSCEVADNGDGD----RS
        GLE+GLGSGQLET ATTSDGLRRSTTGTLRGLEESDDRLRFN AESDWAS DTVGRRTHG VRLRETERE    G A T + WSCE  D+GDGD    R 
Subjt:  GLESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREI-GDGWAATNERWSCEVADNGDGD----RS

Query:  GDAN
        GD +
Subjt:  GDAN

A0A5A7TTZ4 NBS-LRR type resistance protein6.0e-3154.55Show/hide
Query:  RRVAPWSKKDNTVH---CHTMRRATQTG-------TLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYP
        R +  W+   N  H    H++R     G       T +  SSG VERTHQSRDPEGCTYQSSDPE  TYQSSDPEGCTYQSSDPEGCTYQSSDP+G TY 
Subjt:  RRVAPWSKKDNTVH---CHTMRRATQTG-------TLRKQSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYP

Query:  SRLAAHGSVF------GLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDD
        S     G  +      G T  ++          R      + S L SGQLET ATTSDGLRRSTTGTLRGLEES +
Subjt:  SRLAAHGSVF------GLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRATTSDGLRRSTTGTLRGLEESDD

A0A5A7UVY7 Gag/pol protein6.8e-4365.66Show/hide
Query:  KQSSGFVERTHQSRDPEGCTYQSSDPEGYTY----------QSSDPEGCTYQSSDPEGCTYQSSDPKGYTYP-SRLAAHGSVFGLTRLAARLSLRLNSDF
        ++SSG VERTHQSRDPEGCTYQSSDPEGYTY          QSSDPEGC YQSSDPEGCTYQSSDP+GYTYP    ++   +  L    A LS   +++ 
Subjt:  KQSSGFVERTHQSRDPEGCTYQSSDPEGYTY----------QSSDPEGCTYQSSDPEGCTYQSSDPKGYTYP-SRLAAHGSVFGLTRLAARLSLRLNSDF

Query:  RLESRVGLESG------LGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTV
          ++  GL         LGSGQLET ATTSDGLRRSTTGTL GLEESDDRLRFNAAE DWASTDTV
Subjt:  RLESRVGLESG------LGSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTV

A0A5D3CEY7 NBS-LRR type resistance protein1.3e-2852.98Show/hide
Query:  SSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTY-PSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGL
        SSG VERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDP GCTYQSSDP G TY PS   + G  +    L+   S     +  + S +   +G 
Subjt:  SSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTY-PSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGL

Query:  GSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG
           +LE R    +    ST    R           +  +S WAS DTVGRR HGGV LRETER +  G
Subjt:  GSGQLETRATTSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTAGGCGTTGTAGCCTAGTTAAGGAGGAAAGACAGAGTTACTTTGTAGACTTATGTGGCATGACAGTTGTGTTATCTTATCTTACGTCTAAGGAGCCGGTTGG
TACCTTCTGCAATAATAGTGTTCGGCGACACAGAGAGAAAAGGGTTGTGGAGGGTTTCCCTGAAGTGAGGATGTTGATGACTCAAGGGAAAGGGGTTGAAGAAAGGGATC
TTGGATTCCCAAAGACCTCGACACGAAGAGTTGCACCTTGGAGTAAAAAAGATAACACGGTGCATTGCCACACGATGAGGCGAGCAACCCAGACGGGTACCCTACGTAAA
CAGTCTAGTGGTTTCGTAGAACGCACACATCAGTCCCGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCGAAGGATACACCTATCAGTCTAGTGATCCCGAGGG
ATGCACATATCAGTCTAGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCAAAGGATACACCTATCCCTCGCGGCTTGCGGCTCACGGCTCGGTCTTCGGCTTGA
CTCGGCTTGCGGCTCGGCTCAGTCTTCGGCTCAACTCGGATTTTCGACTTGAATCGCGGGTCGGACTGGAATCGGGTCTCGGGTCGGGTCAGCTTGAAACCAGGGCAACC
ACGAGCGACGGTCTTCGGCGTTCGACGACGGGGACGCTTCGCGGCTTGGAGGAGTCCGACGACCGGCTCCGCTTCAATGCGGCAGAGAGCGACTGGGCGTCGACGGACAC
AGTTGGACGAAGGACGCACGGCGGCGTCCGGTTGCGTGAGACCGAGAGAGAGATCGGAGATGGATGGGCTGCGACGAACGAGCGGTGGAGCTGCGAAGTTGCCGACAACG
GAGACGGAGACAGAAGTGGAGACGCAAACGGAGGGGAAAAAAGAAAACGAGCGGCGGCGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTAGGCGTTGTAGCCTAGTTAAGGAGGAAAGACAGAGTTACTTTGTAGACTTATGTGGCATGACAGTTGTGTTATCTTATCTTACGTCTAAGGAGCCGGTTGG
TACCTTCTGCAATAATAGTGTTCGGCGACACAGAGAGAAAAGGGTTGTGGAGGGTTTCCCTGAAGTGAGGATGTTGATGACTCAAGGGAAAGGGGTTGAAGAAAGGGATC
TTGGATTCCCAAAGACCTCGACACGAAGAGTTGCACCTTGGAGTAAAAAAGATAACACGGTGCATTGCCACACGATGAGGCGAGCAACCCAGACGGGTACCCTACGTAAA
CAGTCTAGTGGTTTCGTAGAACGCACACATCAGTCCCGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCGAAGGATACACCTATCAGTCTAGTGATCCCGAGGG
ATGCACATATCAGTCTAGTGATCCCGAAGGATGCACGTATCAGTCTAGTGATCCCAAAGGATACACCTATCCCTCGCGGCTTGCGGCTCACGGCTCGGTCTTCGGCTTGA
CTCGGCTTGCGGCTCGGCTCAGTCTTCGGCTCAACTCGGATTTTCGACTTGAATCGCGGGTCGGACTGGAATCGGGTCTCGGGTCGGGTCAGCTTGAAACCAGGGCAACC
ACGAGCGACGGTCTTCGGCGTTCGACGACGGGGACGCTTCGCGGCTTGGAGGAGTCCGACGACCGGCTCCGCTTCAATGCGGCAGAGAGCGACTGGGCGTCGACGGACAC
AGTTGGACGAAGGACGCACGGCGGCGTCCGGTTGCGTGAGACCGAGAGAGAGATCGGAGATGGATGGGCTGCGACGAACGAGCGGTGGAGCTGCGAAGTTGCCGACAACG
GAGACGGAGACAGAAGTGGAGACGCAAACGGAGGGGAAAAAAGAAAACGAGCGGCGGCGGCGTGA
Protein sequenceShow/hide protein sequence
MDFRRCSLVKEERQSYFVDLCGMTVVLSYLTSKEPVGTFCNNSVRRHREKRVVEGFPEVRMLMTQGKGVEERDLGFPKTSTRRVAPWSKKDNTVHCHTMRRATQTGTLRK
QSSGFVERTHQSRDPEGCTYQSSDPEGYTYQSSDPEGCTYQSSDPEGCTYQSSDPKGYTYPSRLAAHGSVFGLTRLAARLSLRLNSDFRLESRVGLESGLGSGQLETRAT
TSDGLRRSTTGTLRGLEESDDRLRFNAAESDWASTDTVGRRTHGGVRLRETEREIGDGWAATNERWSCEVADNGDGDRSGDANGGEKRKRAAAA