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IVF0021693 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021693
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S29
Genome locationchr01:749195..751328
RNA-Seq ExpressionIVF0021693
SyntenyIVF0021693
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001209 - Ribosomal protein S14
IPR023676 - Ribosomal protein S14, type Z, archaeal
IPR039744 - 40S ribosomal protein S29/30S ribosomal protein S14 type Z
IPR043140 - Ribosomal protein S14/S29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4907652.1 hypothetical protein JHK86_056136 [Glycine max]4.59e-3793.33Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLI
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKV  ++I
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLI

KAG6784461.1 hypothetical protein POTOM_010157 [Populus tomentosa]1.91e-3787.88Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK--KYLITNYV
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKV+  K+L+T+ V
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK--KYLITNYV

KGN43857.1 hypothetical protein Csa_017372 [Cucumis sativus]5.12e-4974.78Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNYVELFSHQNFLL---SNANSNRRF-NKNLDKFLL-HYH
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK        Y++  +H+ + L   SNANSNRRF ++ LDKFLL HYH
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNYVELFSHQNFLL---SNANSNRRF-NKNLDKFLL-HYH

Query:  LILGTVVGGVLVNLV
        L  GTV GGVLV LV
Subjt:  LILGTVVGGVLVNLV

OAY51010.1 hypothetical protein MANES_05G180600v8 [Manihot esculenta]1.02e-3698.21Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKV+
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK

TQE05330.1 hypothetical protein C1H46_009023 [Malus baccata]2.94e-3790.48Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNY
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK     +Y
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNY

TrEMBL top hitse value%identityAlignment
A0A0A0K6C5 Uncharacterized protein1.7e-3674.78Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNYVELFSHQNFLL---SNANSNRRF-NKNLDKF-LLHYH
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK        Y++  +H+ + L   SNANSNRRF ++ LDKF LLHYH
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNYVELFSHQNFLL---SNANSNRRF-NKNLDKF-LLHYH

Query:  LILGTVVGGVLVNLV
          LGTV GGVLV LV
Subjt:  LILGTVVGGVLVNLV

A0A0L9U1C0 Uncharacterized protein7.0e-2798.25Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKK
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK KK
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKK

A0A0S3T7T0 Uncharacterized protein7.0e-2783.58Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNYVELF
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKV  + ++  +  F
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNYVELF

A0A540MHM9 Uncharacterized protein4.1e-2790.48Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNY
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK     +Y
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNY

A0A540N498 Uncharacterized protein4.1e-2790.48Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNY
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK     +Y
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNY

SwissProt top hitse value%identityAlignment
Q4PM47 40S ribosomal protein S297.5e-1869.09Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKV
        MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K+
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKV

Q5I7K3 40S ribosomal protein S292.8e-2587.5Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK
        MGHSNVWNSHPKNYG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIK +
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK

Q680P8 40S ribosomal protein S291.7e-2589.29Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK +
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK

Q6F473 40S ribosomal protein S291.7e-1767.27Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKV
        MGH+N+W SHP+ YG GSR+CR C N HGLIRKYGL  CRQCFR  A +IGF K+
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKV

Q7XYB0 40S ribosomal protein S291.2e-1866.07Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK
        MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIK +
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK

Arabidopsis top hitse value%identityAlignment
AT3G43980.1 Ribosomal protein S14p/S29e family protein1.2e-2689.29Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK +
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK

AT3G44010.1 Ribosomal protein S14p/S29e family protein1.2e-2689.29Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK +
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK

AT4G33865.1 Ribosomal protein S14p/S29e family protein1.2e-2689.29Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK +
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCACTCGAACGTCTGGAATTCGCACCCTAAGAACTACGGACCCGGCTCTCGAACCTGCCGGGTTTGCGGAAATCCACATGGTTTGATCAGAAAGTATGGACTTAT
GTGCTGCAGACAGTGCTTCCGTAGCAACGCCAAGGAAATTGGTTTCATCAAGGTGAAAAAATATCTGATCACTAATTATGTTGAACTATTTTCACATCAAAATTTTTTAT
TGTCAAATGCCAATTCAAATAGAAGGTTTAACAAAAACTTGGATAAATTCCTCTTGCATTATCATCTAATTCTAGGCACAGTTGTGGGTGGGGTTCTGGTTAATCTGGTT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCACTCGAACGTCTGGAATTCGCACCCTAAGAACTACGGACCCGGCTCTCGAACCTGCCGGGTTTGCGGAAATCCACATGGTTTGATCAGAAAGTATGGACTTAT
GTGCTGCAGACAGTGCTTCCGTAGCAACGCCAAGGAAATTGGTTTCATCAAGGTGAAAAAATATCTGATCACTAATTATGTTGAACTATTTTCACATCAAAATTTTTTAT
TGTCAAATGCCAATTCAAATAGAAGGTTTAACAAAAACTTGGATAAATTCCTCTTGCATTATCATCTAATTCTAGGCACAGTTGTGGGTGGGGTTCTGGTTAATCTGGTT
TAG
Protein sequenceShow/hide protein sequence
MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVKKYLITNYVELFSHQNFLLSNANSNRRFNKNLDKFLLHYHLILGTVVGGVLVNLV