CuGenDBv2

Gene ID	IVF0021709
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ATP synthase epsilon chain, chloroplastic
Genome location	chr05:336448..336642
RNA-Seq Expression	IVF0021709
Synteny	IVF0021709
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR001469 - ATP synthase, F1 complex, delta/epsilon subunit IPR036771 - F0F1 ATP synthase delta/epsilon subunit, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

ASY96329.1 ATP synthase CF1 epsilon subunit [Cucumis melo subsp. agrestis]

1.63e-31

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

KAA0040079.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. makuwa]

2.88e-35

100

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Query:  MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
Subjt:  MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

YP_004841789.1 ATP synthase CF1 epsilon subunit [Cucumis melo subsp. melo]

1.63e-31

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

YP_009752081.1 CF1 subunit epsilon [Dendrosicyos socotranus]

1.63e-31

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

YP_009752418.1 CF1 subunit epsilon [Trichosanthes tricuspidata]

1.63e-31

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

TrEMBL top hits

e value

%identity

Alignment

A0A1X9Q1L0 ATP synthase epsilon chain, chloroplastic

2.1e-23

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

A0A218KG49 ATP synthase epsilon chain, chloroplastic

2.1e-23

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

A0A249RZA2 ATP synthase epsilon chain, chloroplastic

2.1e-23

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

A0A5D3DDV0 ATP synthase CF1 epsilon subunit

1.7e-25

100

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Query:  MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
Subjt:  MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

G3ETZ1 ATP synthase epsilon chain, chloroplastic

2.1e-23

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

SwissProt top hits

e value

%identity

Alignment

A0ZZ41 ATP synthase epsilon chain, chloroplastic

9.0e-24

91.67

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Query:  WLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        WLTMALMGGFARIGNNE+TILVNDAEK SDIDPQEAQQ LEI EANLRKA+GKRQTIEAN
Subjt:  WLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

P09468 ATP synthase epsilon chain, chloroplastic

1.8e-24

89.06

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Query:  MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        + N WLTMALMGGFARIGNNE+TILVNDAEK SDIDPQEAQQTLEI EANLRKA+GKRQTIEAN
Subjt:  MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

Q09MH2 ATP synthase epsilon chain, chloroplastic

9.0e-24

91.67

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Query:  WLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        WLTMALMGGFARIGNNE+TILVNDAEK+SDIDPQEAQQTLEI EANLRKA+ KRQTIEAN
Subjt:  WLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

Q49KZ2 ATP synthase epsilon chain, chloroplastic

9.0e-24

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Query:  WLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        WLTMALMGGFARIGNNE+TILVNDAEK SDIDPQEAQ+TLE+ EANLRKA+GKRQTIEAN
Subjt:  WLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

Q4VZG9 ATP synthase epsilon chain, chloroplastic

5.7e-26

96.77

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Query:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        +GWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEI EANLRKAQGKRQTIEAN
Subjt:  NGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00470.1 ATP synthase epsilon chain

1.3e-25

89.06

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Query:  MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN
        + N WLTMALMGGFARIGNNE+TILVNDAEK SDIDPQEAQQTLEI EANLRKA+GKRQTIEAN
Subjt:  MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

Sequences

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CDS sequence

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ATGATGAATGGATGGTTAACGATGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATGAAGTCACTATTTTAGTAAATGATGCGGAGAAGGCCAGTGACATTGATCC
ACAAGAAGCTCAGCAAACTCTCGAAATAGTGGAAGCCAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTAG

mRNA sequence

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ATGATGAATGGATGGTTAACGATGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATGAAGTCACTATTTTAGTAAATGATGCGGAGAAGGCCAGTGACATTGATCC
ACAAGAAGCTCAGCAAACTCTCGAAATAGTGGAAGCCAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTAG

Protein sequence

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MMNGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIVEANLRKAQGKRQTIEAN

IVF0021709 (gene) of Melon (IVF77) v1 genome