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IVF0021773 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021773
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPectinesterase
Genome locationchr04:30390112..30390306
RNA-Seq ExpressionIVF0021773
SyntenyIVF0021773
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043958.1 putative pectinesterase 14 isoform X1 [Cucumis melo var. makuwa]8.15e-2282.14Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        +  GCRIKSI KEVL GGVSGAIT  GRQTRSEE GFAFINCT SG+GKVWLGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

TYK25184.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa]3.30e-3190.62Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAWALVHCRIL
        ++    IKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAWALVHCRIL
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAWALVHCRIL

XP_004137990.1 putative pectinesterase 14 [Cucumis sativus]8.24e-2282.14Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        +  GCRIKSI KEVL GGVSGAIT  GRQTRSEE GFAFINCT SG+GKVWLGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

XP_008442748.1 PREDICTED: putative pectinesterase 14 isoform X1 [Cucumis melo]5.94e-2282.14Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        +  GCRIKSI KEVL GGVSGAIT  GRQTRSEE GFAFINCT SG+GKVWLGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

XP_016899646.1 PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis melo]1.99e-24100Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGK
        MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGK
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGK

TrEMBL top hitse value%identityAlignment
A0A1S3B6F5 Pectinesterase1.3e-1782.14Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        +  GCRIKSI KEVL GGVSGAIT  GRQTRSEE GFAFINCT SG+GKVWLGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

A0A1S4DUI5 F-box/kelch-repeat protein At3g23880-like3.1e-19100Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGK
        MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGK
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGK

A0A5A7TM68 Pectinesterase1.3e-1782.14Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        +  GCRIKSI KEVL GGVSGAIT  GRQTRSEE GFAFINCT SG+GKVWLGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

A0A5D3DNL9 Serine/threonine-protein phosphatase 7 long form-like protein isoform X11.0e-2590.62Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAWALVHCRIL
        ++    IKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAWALVHCRIL
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAWALVHCRIL

A0A5D3DNS7 Pectinesterase1.3e-1782.14Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        +  GCRIKSI KEVL GGVSGAIT  GRQTRSEE GFAFINCT SG+GKVWLGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

SwissProt top hitse value%identityAlignment
O23038 Probable pectinesterase 81.3e-0948.28Show/hide
Query:  MVQGCRIKSIPKEVLRG--GVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + Q CRI S+  ++  G   V+GA+T  GR ++ E  GF+F+NCT  G G VWLGRAW
Subjt:  MVQGCRIKSIPKEVLRG--GVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

Q8VYZ3 Probable pectinesterase 535.5e-0535.71Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + +GC + +I  ++      GA+T  GR +  E+ GF+F+ C  +G G ++LGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

Q9FM79 Pectinesterase QRT12.5e-0541.07Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + Q C I S  K        GAI    R + +E+ GF+F+NC  SG G+++LGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

Q9ZQA3 Probable pectinesterase 153.1e-0848.21Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + Q C I SI K     GV+G+IT  GRQ+  E+ GF+F+NC   G+G++ LGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

Q9ZQA4 Putative pectinesterase 141.3e-0641.07Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + + C + SI KE       G IT  G+ T  +  GF F+NC  +G+ +VWLGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

Arabidopsis top hitse value%identityAlignment
AT1G05310.1 Pectin lyase-like superfamily protein9.0e-1148.28Show/hide
Query:  MVQGCRIKSIPKEVLRG--GVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + Q CRI S+  ++  G   V+GA+T  GR ++ E  GF+F+NCT  G G VWLGRAW
Subjt:  MVQGCRIKSIPKEVLRG--GVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

AT2G36700.1 Pectin lyase-like superfamily protein9.3e-0841.07Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + + C + SI KE       G IT  G+ T  +  GF F+NC  +G+ +VWLGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

AT2G36710.1 Pectin lyase-like superfamily protein2.2e-0948.21Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + Q C I SI K     GV+G+IT  GRQ+  E+ GF+F+NC   G+G++ LGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

AT5G19730.1 Pectin lyase-like superfamily protein3.9e-0635.71Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + +GC + +I  ++      GA+T  GR +  E+ GF+F+ C  +G G ++LGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW

AT5G55590.1 Pectin lyase-like superfamily protein1.8e-0641.07Show/hide
Query:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW
        + Q C I S  K        GAI    R + +E+ GF+F+NC  SG G+++LGRAW
Subjt:  MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGGGATGTAGGATCAAATCAATACCAAAGGAAGTGTTGCGTGGTGGGGTGAGTGGAGCCATCACACCTCTGGGAAGGCAAACAAGAAGTGAGGAAATTGGTTT
TGCTTTCATCAATTGCACCAATAGTGGCGCTGGGAAGGTGTGGCTTGGTCGTGCTTGGGCACTTGTGCACTGTCGTATTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGGGATGTAGGATCAAATCAATACCAAAGGAAGTGTTGCGTGGTGGGGTGAGTGGAGCCATCACACCTCTGGGAAGGCAAACAAGAAGTGAGGAAATTGGTTT
TGCTTTCATCAATTGCACCAATAGTGGCGCTGGGAAGGTGTGGCTTGGTCGTGCTTGGGCACTTGTGCACTGTCGTATTCTCTAA
Protein sequenceShow/hide protein sequence
MVQGCRIKSIPKEVLRGGVSGAITPLGRQTRSEEIGFAFINCTNSGAGKVWLGRAWALVHCRIL