CuGenDBv2

Gene ID	IVF0021785
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	KH domain-containing protein
Genome location	chr04:16213104..16213479
RNA-Seq Expression	IVF0021785
Synteny	IVF0021785
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0051174.1 KH domain-containing protein [Cucumis melo var. makuwa]

7.02e-49

92.31

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLV+L VLLYL LSADGSNSLSYD REGKRHGRGH YSSGYGGFNDL GDVYGSY GL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL

KAA0060810.1 KH domain-containing protein [Cucumis melo var. makuwa]

6.43e-35

79.76

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Query:  ELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAG-DVYGSYSG
        +LDVAKEALVHIVT+LRA LF RE AL +VLP+LLY PLSADGS+SLSYD R+GKRHGRG  YSSGYGGFNDLAG D YGSY G
Subjt:  ELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAG-DVYGSYSG

TYK03725.1 KH domain-containing protein [Cucumis melo var. makuwa]

2.05e-55

100

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL

TYK08822.1 KH domain-containing protein [Cucumis melo var. makuwa]

4.00e-35

79.76

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Query:  ELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAG-DVYGSYSG
        +LDVAKEALVHIVT+LRA LF RE AL +VLP+LLY PLSADGS+SLSYD R+GKRHGRG  YSSGYGGFNDLAG D YGSY G
Subjt:  ELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAG-DVYGSYSG

XP_016900407.1 PREDICTED: uncharacterized protein LOC107990890, partial [Cucumis melo]

6.51e-56

100

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVM1 Uncharacterized protein

1.4e-28

82.42

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLA-GDVYGSYSG
        MVQ+   +LDVAKEALVHIVT+LRANLF RE AL  VLPVL YLPLSADGS+SLSYD REGKRHGRGH YSSGYGGFNDLA GD YGSYSG
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLA-GDVYGSYSG

A0A1S4DWP9 uncharacterized protein LOC107990890

1.7e-42

100

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL

A0A5A7TBQ7 KH domain-containing protein

1.8e-28

81.32

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLA-GDVYGSYSG
        MVQ+   +LDVAKEAL+HIVT+LRANLF RE AL  VLPVL YLPLSADGS+SLSYD REGKRHGRGH YSSGYGGFNDLA GD YGSYSG
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLA-GDVYGSYSG

A0A5A7U784 KH domain-containing protein

2.8e-37

92.31

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLV+L VLLYL LSADGSNSLSYD REGKRHGRGH YSSGYGGFNDL GDVYGSY GL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL

A0A5D3BXA0 KH domain-containing protein

1.7e-42

100

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
        MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G15270.1 RNA-binding KH domain-containing protein

9.5e-14

45.45

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSY
        MVQ+   ELDVAKEAL+ I ++LRAN+F RE A+  ++PVL Y+P++ D  +   YD R+ +R  RG+PY  GYG  + ++ + Y  Y
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSY

AT5G15270.2 RNA-binding KH domain-containing protein

9.5e-14

45.45

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Query:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSY
        MVQ+   ELDVAKEAL+ I ++LRAN+F RE A+  ++PVL Y+P++ D  +   YD R+ +R  RG+PY  GYG  + ++ + Y  Y
Subjt:  MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSY

Sequences

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CDS sequence

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ATGGTTCAGTTAGATATATGGGAACTTGATGTTGCCAAGGAGGCTCTTGTACATATAGTGACCAAGCTTAGAGCTAACCTTTTTTATAGAGAAGACGCTCTCTTAGTCGT
TTTGCCTGTTCTGCTGTATCTTCCTCTGTCAGCTGATGGTTCAAATAGTCTTAGCTACGATCGTAGAGAAGGTAAAAGACATGGGCGTGGGCATCCATATTCAAGTGGTT
ATGGGGGTTTCAATGATTTGGCTGGTGATGTTTATGGAAGCTACAGTGGCTTATAG

mRNA sequence

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Protein sequence

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MVQLDIWELDVAKEALVHIVTKLRANLFYREDALLVVLPVLLYLPLSADGSNSLSYDRREGKRHGRGHPYSSGYGGFNDLAGDVYGSYSGL

IVF0021785 (gene) of Melon (IVF77) v1 genome