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IVF0021843 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021843
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein pleiotropic regulatory locus 1
Genome locationchr08:5607203..5608190
RNA-Seq ExpressionIVF0021843
SyntenyIVF0021843
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025721.1 protein pleiotropic regulatory locus 1 [Cucumis melo var. makuwa]1.24e-40100Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG
        MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG

KAG5544791.1 hypothetical protein RHGRI_017286 [Rhododendron griersonianum]1.13e-2777.97Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G DNGSLWFWDW + +NFQ+SQT  QPGSLDSEAGIYA SY++TG+RLVTCEADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

KGN48861.1 hypothetical protein Csa_003772 [Cucumis sativus]4.30e-3185.25Show/hide
Query:  SGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG
        SG DNG LWFWDW TAYNFQ+SQT AQP SLDSEAGIYALSY+I GSRLVTCEADKT RCG
Subjt:  SGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG

PSS18227.1 Protein pleiotropic regulatory locus 1 like [Actinidia chinensis var. chinensis]1.46e-2777.97Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G DNGSLWFWDW + +NFQ+ QT  QPGSLDSEAGIYA+SY++TGSRLVTCEADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

XP_023901316.1 protein pleiotropic regulatory locus 1-like [Quercus suber]1.01e-2776.27Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        M +G DNGS+WFWDW + +NFQ+SQT  QPGSLDSEAGIYALSY++TGSRL+TCEADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

TrEMBL top hitse value%identityAlignment
A0A0A0KM95 Uncharacterized protein3.0e-2285.25Show/hide
Query:  SGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG
        SG DNG LWFWDW TAYNFQ+SQT AQP SLDSEAGIYALSY+I GSRLVTCEADKT RCG
Subjt:  SGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG

A0A1S3C7C3 protein pleiotropic regulatory locus 14.3e-2183.05Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G DNGSLWFWDW + +NFQ+SQT  QPGSLDSEAGIYALSY+ITGSRLVTCEADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

A0A5D3CQ93 Protein pleiotropic regulatory locus 11.1e-29100Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG
        MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG

A0A6J1CB66 protein pleiotropic regulatory locus 15.6e-2181.36Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G DNGSLWFWDW + +NFQ+SQT  QPGSLDSEAGIYALSY+ITGSRL+TCEADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

W1P3X1 WD_REPEATS_REGION domain-containing protein9.6e-2177.97Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G DNGSLWFWDWN+ +NFQ++QT  QPGSLDSEAGIYALSY++TGSRL++CEADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

SwissProt top hitse value%identityAlignment
O13615 Pre-mRNA-splicing factor prp54.0e-1661.02Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        M SG DNGS+ FWDW + + +Q  Q+  QPGSLDSEAGI+A S++ TG RL+TCEADK+
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

O43660 Pleiotropic regulator 13.4e-1559.32Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        +VSG DNG++  WDW T YNFQR     QPGSLDSE+GI+A +++ + SRL+T EADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

Q2KID6 Pleiotropic regulator 13.4e-1559.32Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        +VSG DNG++  WDW T YNFQR     QPGSLDSE+GI+A +++ + SRL+T EADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

Q39190 Protein pleiotropic regulator PRL22.3e-1969.49Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G D G LWFWDW + +NFQR++T  QPGSL+SEAGIYA  Y+ TGSRLVTCE DKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

Q42384 Protein pleiotropic regulatory locus 14.6e-2071.19Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G DNGS+WFWDW + ++FQ+S+T  QPGSL+SEAGIYA  Y+ TGSRLVTCEADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

Arabidopsis top hitse value%identityAlignment
AT3G16650.1 Transducin/WD40 repeat-like superfamily protein1.6e-2069.49Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G D G LWFWDW + +NFQR++T  QPGSL+SEAGIYA  Y+ TGSRLVTCE DKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT

AT4G15900.1 pleiotropic regulatory locus 13.2e-2171.19Show/hide
Query:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT
        MV+G DNGS+WFWDW + ++FQ+S+T  QPGSL+SEAGIYA  Y+ TGSRLVTCEADKT
Subjt:  MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTGGAGTTGACAATGGTAGTTTATGGTTCTGGGATTGGAATACTGCTTATAACTTTCAGCGATCACAAACAACTGCTCAACCTGGCTCGTTGGATAGTGAAGC
TGGGATTTATGCTCTTTCCTATAACATAACTGGTTCGAGGCTTGTAACTTGTGAAGCAGATAAAACTAATAGATGTGGATAG
mRNA sequenceShow/hide mRNA sequence
AAATACTCATTTTCATCTTCTTTTTTTTTCTTTCGTTCATCTCCGGCGATTCCTCTGCTTCACCGGCTTTCGTAGGCGGTTTCCGACGGTTGAGAATATCTTATTGTTAA
ACATTCGGTAATTATGGAAAGAATCGGAATCAAGTGACCCCGTCGGGATTGGTAAAATTACAGGGTCATAAGTGGTCACCTAAGTTGTGTAGGGTCTGTTGCATTTGATC
CAAGTAGCATGTGTTTTTGTACTGGATCAGTAGATTGTACCAACGGGATTTGAGATGAAGAACAAGTCAAATGCTGGGATCTCTAACAGAACAAGGTTGTGATTGTCTCC
CATGACCTAACTATTACGTTTTGGGATCGTAGATATGGAAAAACAATGACAACTCTAACACATCAGAAGAAATCTATTCGAGCAATGGCACAACATCCTAACAACACAGT
GTCTTTGCATCTGCTTCAGCGGATAATATCAAGAAATTTAATCTTCCCAGAGGGGAGTTTGGGCAGAACATGCGGTGGATGTCAGTGAGAAGGGTGTAATGGTGAGTGGA
GTTGACAATGGTAGTTTATGGTTCTGGGATTGGAATACTGCTTATAACTTTCAGCGATCACAAACAACTGCTCAACCTGGCTCGTTGGATAGTGAAGCTGGGATTTATGC
TCTTTCCTATAACATAACTGGTTCGAGGCTTGTAACTTGTGAAGCAGATAAAACTAATAGATGTGGATAGAAGATGAAAATGCTACCCCTATAACTGACTATCTCTTCAA
AAATATCAAGCCATCCGAAGATATACGAAGACTCTAG
Protein sequenceShow/hide protein sequence
MVSGVDNGSLWFWDWNTAYNFQRSQTTAQPGSLDSEAGIYALSYNITGSRLVTCEADKTNRCG