CuGenDBv2

Gene ID	IVF0021849
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Biogenesis of lysosome-related organelles complex 1 subunit 7
Genome location	chr07:5634442..5648163
RNA-Seq Expression	IVF0021849
Synteny	IVF0021849
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0031083 - BLOC-1 complex (cellular component)
InterPro domains	IPR017246 - Snapin IPR028119 - Snapin/Pallidin/Snn1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144641.1 uncharacterized protein LOC101218072 [Cucumis sativus]

2.02e-92

94.81

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEKLDDDYSANEDSNVSAELETSI+  GDLQEGND ENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP
        FIMQHASRISNVRKRVLSLNSILRTIQRR+DNIDRAITMGNLPDTRSS +SSQP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP

XP_008444284.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo]

6.83e-100

100

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP

XP_038897517.1 uncharacterized protein LOC120085558 isoform X2 [Benincasa hispida]

5.92e-84

93.06

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEKLD DYSANE+SNV +ELETSISP GDLQEGND ENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLPD
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD

XP_038897521.1 uncharacterized protein LOC120085558 isoform X5 [Benincasa hispida]

2.91e-84

93.06

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEKLD DYSANE+SNV +ELETSISP GDLQEGND ENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLPD
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPD

XP_038897522.1 uncharacterized protein LOC120085558 isoform X6 [Benincasa hispida]

2.09e-83

93.01

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEKLD DYSANE+SNV +ELETSISP GDLQEGND ENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BAU4 Biogenesis of lysosome-related organelles complex 1 subunit 7

8.7e-76

100

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP
        FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP

A0A5A7UCW4 Biogenesis of lysosome-related organelles complex 1 subunit 7

3.0e-52

100

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISN
        FIMQHASRISN
Subjt:  FIMQHASRISN

A0A6J1FEP4 Biogenesis of lysosome-related organelles complex 1 subunit 7

7.2e-54

81.7

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEK+ DD  ANEDS+VS ELETSIS  GDL+E ND  N NL NSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDR+TTELDQLLE APFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQ
        FIMQHASRIS+VRKRVLSLNSIL +IQRR+DNIDRAI+MGN PDT SS +SSQ
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQ

A0A6J1FIR1 Biogenesis of lysosome-related organelles complex 1 subunit 7

4.2e-54

79.22

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH  EK+ DD SAN+DS VSAELE SISP GD++E ND  N NLG+SNALANGLSSML+NI+RDFDSKADDTLKSQ+ LS SLDRLT+ELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP
        FIMQHA RIS+VRKRVLSLNSILR++QRRVDNIDR I+M NLPD RSS +SSQP
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP

A0A6J1IKP2 Biogenesis of lysosome-related organelles complex 1 subunit 7

7.2e-54

81.05

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Query:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP
        MH PEK+ DD  ANEDS+ S ELETSIS  G+L+E ND  N NL NSNALANGLSSMLINIIRDFDSKADDTLKSQ+ LSSSLDR+TTELDQLLEDAPFP
Subjt:  MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFP

Query:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQ
        FIMQHASRIS+VRKRVLSLNSILR+IQRR+DNIDRAI+MGN PDT SS + SQ
Subjt:  FIMQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G79070.1 SNARE-associated protein-related

8.8e-28

50.74

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Query:  ANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNV
        ++ D   SA+  TS       ++G  G     G   A+A GLS+ML ++I+DFDSKA DTL SQ+ LS SLDRL  ELDQLLE+AP PFI+QHASRIS+V
Subjt:  ANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRISNV

Query:  RKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSS
        ++RV SLN +L+++QRR+DNID  ++     +  SS
Subjt:  RKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCACCGTCCGGAGAAATTGGACGACGATTATTCTGCCAATGAGGACAGCAACGTCTCAGCTGAATTGGAGACTTCAATTAGTCCCATTGGTGATCTCCAGGAAGGAAA
TGATGGTGAAAATAAGAACTTAGGAAATTCTAATGCTCTAGCAAATGGGCTCTCTTCCATGCTTATCAACATCATAAGGGATTTTGACTCGAAAGCTGATGATACTCTCA
AAAGCCAGAACCATCTTTCATCTTCCCTCGATCGTCTTACTACAGAACTGGATCAATTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATATCT
AATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAGTGGATAACATAGATCGGGCAATCACGATGGGCAATCTACCAGATACTCGTTC
CTCTCCCAATTCCTCACAGCCTTAA

mRNA sequence

Show/hide mRNA sequence

GTACAAGAGCGATGGTTGTGGCCAGTCCCTTCAGAGCCATGGTTGTCGTGTAACCAAGTTGGGTCTTCCTTAGTTATGTGGCTTTGGATTGTTTCTTCAAAAGAGAAAAA
TGCTCTGACTCCCAGTTCTCTCGCCTCGTCCGGCCACATAGCTGCCGCTGCACCTCCGTCCGACGTTCGTCCAACACCGCAGTCGCACGCCGGTCGTTTTCCATCTCCGC
CGGAGTCGCACGTCGGGACAGAATTGAAATAATATTATCCCAGACATCCTTTTATCTGAACTGGGCTACAAACTTACGACGAGCCAATTATTGAATCCTTCTGGATTCAT
ACCCTAAGTATTGCGAGACTCTGAACTACAGTAGGTGTGAACTTGGCTGAGATGCACCGTCCGGAGAAATTGGACGACGATTATTCTGCCAATGAGGACAGCAACGTCTC
AGCTGAATTGGAGACTTCAATTAGTCCCATTGGTGATCTCCAGGAAGGAAATGATGGTGAAAATAAGAACTTAGGAAATTCTAATGCTCTAGCAAATGGGCTCTCTTCCA
TGCTTATCAACATCATAAGGGATTTTGACTCGAAAGCTGATGATACTCTCAAAAGCCAGAACCATCTTTCATCTTCCCTCGATCGTCTTACTACAGAACTGGATCAATTA
CTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCAAGGATATCTAATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAGT
GGATAACATAGATCGGGCAATCACGATGGGCAATCTACCAGATACTCGTTCCTCTCCCAATTCCTCACAGCCTTAAGATTGTACATATCTGCAAGTCCTCTCTCTCTTCT
CTACATATACACATTATTTTGACAACGTGTAGAGTGGATCATGCAAGTTTATGTGTACTAAGCTACGCTCATATTGACTAACAATCTTGAATATACTACTTGCTTAAATT
ATACATTTGTAAGATTTGGTACTCTTCTAATCCATATTTACTTCGTTTATACTA

Protein sequence

Show/hide protein sequence

MHRPEKLDDDYSANEDSNVSAELETSISPIGDLQEGNDGENKNLGNSNALANGLSSMLINIIRDFDSKADDTLKSQNHLSSSLDRLTTELDQLLEDAPFPFIMQHASRIS
NVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPDTRSSPNSSQP

IVF0021849 (gene) of Melon (IVF77) v1 genome