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IVF0021875 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021875
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr04:20791041..20791406
RNA-Seq ExpressionIVF0021875
SyntenyIVF0021875
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044242.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]3.89e-2953.92Show/hide
Query:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM
        SG KVNW+KS L GVN+ + EL+  A  L CK + LP  YLG+   G   +  FW+P+ID+VHK LD+WK FN+SRGGR TLC S+L+N PTY +  F +
Subjt:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM

Query:  PE
        PE
Subjt:  PE

KAA0051398.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.74e-2958.42Show/hide
Query:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM
        S +K+NWEKSA+C VN+++ +  S AS L CK + LPL Y G+   G      FWQPV+DK  K L  WKR NLSRGGR TLC SVLSN PTY M TFLM
Subjt:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM

Query:  P
        P
Subjt:  P

TYJ97221.1 putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]2.24e-2553.68Show/hide
Query:  MASGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTY
        + S QKVNWEKSAL GV++ E  L+ TA  + CKA++LP+ YL +   G      FWQPVID++HK LD+WK FN+ RGGR  LC +VL++L TY
Subjt:  MASGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTY

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]1.34e-3863.73Show/hide
Query:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM
        S QKVNWEKSA+CG+N++E +++S A+ L CK  HLPL YLG+   G    V+FWQPVIDK+   LDKW+RFNLSRGG+ATLCKSV SNLPTY +  FL+
Subjt:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM

Query:  PE
        PE
Subjt:  PE

XP_038889274.1 uncharacterized protein LOC120079176 [Benincasa hispida]1.30e-3269.57Show/hide
Query:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPT
        SGQKVNWEKSAL G+NVDE EL+STA+SL CKADHLP  YLG+   G   K++FWQPV++     LDKWK FNLSRG R TLC SVLSNLPT
Subjt:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPT

TrEMBL top hitse value%identityAlignment
A0A5A7TLN3 Transposon Tf2-9 polyprotein4.2e-2553.92Show/hide
Query:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM
        SG KVNW+KS L GVN+ + EL+  A  L CK + LP  YLG+   G   +  FW+P+ID+VHK LD+WK FN+SRGGR TLC S+L+N PTY +  F +
Subjt:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM

Query:  PE
        PE
Subjt:  PE

A0A5A7U808 Integrase, catalytic core2.5e-2558.42Show/hide
Query:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM
        S +K+NWEKSA+C VN+++ +  S AS L CK + LPL Y G+   G      FWQPV+DK  K L  WKR NLSRGGR TLC SVLSN PTY M TFLM
Subjt:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLM

Query:  P
        P
Subjt:  P

A0A5D3BF26 Putative LRR receptor-like serine/threonine-protein kinase5.7e-2253.68Show/hide
Query:  MASGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTY
        + S QKVNWEKSAL GV++ E  L+ TA  + CKA++LP+ YL +   G      FWQPVID++HK LD+WK FN+ RGGR  LC +VL++L TY
Subjt:  MASGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTY

A0A5D3BQV1 Reverse transcriptase domain-containing protein1.7e-1862.34Show/hide
Query:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRG
        SGQKVNW+KSALCG+NV E EL+S A++L  K DHLP+ YLG+   G   +++ WQ V DKVH  LDKWKRFN SRG
Subjt:  SGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGV---GTESKVTFWQPVIDKVHKNLDKWKRFNLSRG

A0A5D3D2G4 Uncharacterized protein1.6e-1946.94Show/hide
Query:  KVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLG--VGTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLMPE
        +V+W+KSAL GVN+ E  L+     +G KA++LP+ Y+G  +G   +  FWQPVID +HK L++WK  N+SRGGR  LCK++L++ PTY +  F +P+
Subjt:  KVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLG--VGTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLMPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTGGCCAGAAAGTTAATTGGGAAAAATCAGCCTTGTGTGGTGTTAATGTTGATGAGATTGAACTGATGTCTACTGCTTCAAGTTTGGGCTGCAAGGCTGATCA
TCTTCCTTTATTTTACCTTGGGGTGGGTACCGAAAGCAAAGTCACATTTTGGCAACCAGTGATTGATAAAGTACACAAAAATTTAGATAAGTGGAAAAGATTTAACTTAT
CTAGGGGAGGAAGAGCGACATTATGCAAATCGGTTTTATCAAATCTGCCTACTTATTGCATGCCAACCTTTTTAATGCCTGAAGGGTCAGTGGCAGATCGTTGGGACAGC
TCCTTGGCTTCTCGGTCCATCTCTTTTTGGCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTGGCCAGAAAGTTAATTGGGAAAAATCAGCCTTGTGTGGTGTTAATGTTGATGAGATTGAACTGATGTCTACTGCTTCAAGTTTGGGCTGCAAGGCTGATCA
TCTTCCTTTATTTTACCTTGGGGTGGGTACCGAAAGCAAAGTCACATTTTGGCAACCAGTGATTGATAAAGTACACAAAAATTTAGATAAGTGGAAAAGATTTAACTTAT
CTAGGGGAGGAAGAGCGACATTATGCAAATCGGTTTTATCAAATCTGCCTACTTATTGCATGCCAACCTTTTTAATGCCTGAAGGGTCAGTGGCAGATCGTTGGGACAGC
TCCTTGGCTTCTCGGTCCATCTCTTTTTGGCGTTAA
Protein sequenceShow/hide protein sequence
MASGQKVNWEKSALCGVNVDEIELMSTASSLGCKADHLPLFYLGVGTESKVTFWQPVIDKVHKNLDKWKRFNLSRGGRATLCKSVLSNLPTYCMPTFLMPEGSVADRWDS
SLASRSISFWR