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IVF0021882 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021882
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCCT domain-containing protein
Genome locationchr12:560255..561519
RNA-Seq ExpressionIVF0021882
SyntenyIVF0021882
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR010402 - CCT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65847.1 hypothetical protein Csa_023240 [Cucumis sativus]1.62e-8081.18Show/hide
Query:  MEEREMCYSWLVKSPKKEV---QQLVPTPS-IWEDDFRAFFDLADEENPPL-LHQPDC-HFQD-VN-VMENN-KVSNLNLNLNYEEVLEAWSDRGSLWAS
        MEERE+C+SWLVKSPKKE+   QQ+VPTPS IWEDDFRAFFDL  EE PP  LH PD  HFQ+ VN VMENN KVSNLNLNLNYEEVLEAWSDRGSLWA+
Subjt:  MEEREMCYSWLVKSPKKEV---QQLVPTPS-IWEDDFRAFFDLADEENPPL-LHQPDC-HFQD-VN-VMENN-KVSNLNLNLNYEEVLEAWSDRGSLWAS

Query:  AS-----DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD
        AS     D TH PYMGEVPI+RMEEERRRRVKRYKEKR  R+FCKKIRYQVRKLNADRRPRIKGRFVKTD
Subjt:  AS-----DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD

XP_023520167.1 zinc finger protein CONSTANS-LIKE 6 [Cucurbita pepo subsp. pepo]2.68e-4350.24Show/hide
Query:  MCYSWLVKSPKKE---VQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD--------------------------------------------------
        M YS L+KSPKKE    +Q VP  SIW DDF+AFF+L++EE  PL  Q +                                                  
Subjt:  MCYSWLVKSPKKE---VQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD--------------------------------------------------

Query:  CHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRI
        C F    VME+ K ++LNLNLNYEEV EAWS RGSLWA    S S+PTH  YMGEVP  RMEEER RRV RY+EKR TR+F  KIRYQVRKLNA +RPRI
Subjt:  CHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRI

Query:  KGRFVKT
        KGRFVKT
Subjt:  KGRFVKT

XP_038893944.1 zinc finger protein CONSTANS-LIKE 16 isoform X1 [Benincasa hispida]5.29e-6673.72Show/hide
Query:  MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----
        MEEREM +SWLVKSPKKE +Q VP  SIWEDDF+AFF+L DEENPP   L QPD HF D   MEN    +LNLNLNYEEVLEAWSDRGSLWA+A+     
Subjt:  MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----

Query:  DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIK
        D TH PYMGEVP  RMEEER RRV RYKEKRHTR+F KKIRYQVRKLNA++RPRIK
Subjt:  DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIK

XP_038893945.1 zinc finger protein CONSTANS-LIKE 7 isoform X2 [Benincasa hispida]5.07e-6772.96Show/hide
Query:  MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----
        MEEREM +SWLVKSPKKE +Q VP  SIWEDDF+AFF+L DEENPP   L QPD HF D   MEN    +LNLNLNYEEVLEAWSDRGSLWA+A+     
Subjt:  MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----

Query:  DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRF
        D TH PYMGEVP  RMEEER RRV RYKEKRHTR+F KKIRYQVRKLNA++RPRIK  F
Subjt:  DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRF

XP_038893946.1 zinc finger protein CONSTANS-LIKE 7 isoform X3 [Benincasa hispida]1.59e-7174.69Show/hide
Query:  MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----
        MEEREM +SWLVKSPKKE +Q VP  SIWEDDF+AFF+L DEENPP   L QPD HF D   MEN    +LNLNLNYEEVLEAWSDRGSLWA+A+     
Subjt:  MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPL--LHQPDCHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASAS-----

Query:  DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKT
        D TH PYMGEVP  RMEEER RRV RYKEKRHTR+F KKIRYQVRKLNA++RPRIKGRFVKT
Subjt:  DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKT

TrEMBL top hitse value%identityAlignment
A0A0A0LYC0 CCT domain-containing protein7.4e-6281.18Show/hide
Query:  MEEREMCYSWLVKSPKKEV---QQLVPTP-SIWEDDFRAFFDLADEEN-PPLLHQPD-CHFQD-VN-VME-NNKVSNLNLNLNYEEVLEAWSDRGSLWAS
        MEERE+C+SWLVKSPKKE+   QQ+VPTP SIWEDDFRAFFDL  EE  PP LH PD  HFQ+ VN VME NNKVSNLNLNLNYEEVLEAWSDRGSLWA+
Subjt:  MEEREMCYSWLVKSPKKEV---QQLVPTP-SIWEDDFRAFFDLADEEN-PPLLHQPD-CHFQD-VN-VME-NNKVSNLNLNLNYEEVLEAWSDRGSLWAS

Query:  AS-----DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD
        AS     D TH PYMGEVPI+RMEEERRRRVKRYKEKR  R+FCKKIRYQVRKLNADRRPRIKGRFVKTD
Subjt:  AS-----DPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD

A0A2N9FHK6 CCT domain-containing protein4.2e-2555.22Show/hide
Query:  IWEDDFRAFFDLADEENPPLLHQPDCHFQDVNVMENNKV-SNLNLNLNYEEVLEAWSDRGSLWASASDPTHVP---YMGEVPIMRMEEERRRR---VKRY
        ++E+  + FF+  +EE+    +  D   +++ V++++++ ++LNLNLNYEEVL+AWS+RGSLWA  S P+      YMGEVP+  MEEER RR   V RY
Subjt:  IWEDDFRAFFDLADEENPPLLHQPDCHFQDVNVMENNKV-SNLNLNLNYEEVLEAWSDRGSLWASASDPTHVP---YMGEVPIMRMEEERRRR---VKRY

Query:  KEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK
        KEKR TR+F KKIRYQVRKLNAD+RPR+KGRFVK
Subjt:  KEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK

A0A6J1DMX8 zinc finger protein CONSTANS-LIKE 6 isoform X15.9e-2747.72Show/hide
Query:  MCYSWLVKSPKKEVQQ-----------------LVPTPSIWEDDFRAFFDLAD-------EENP-PLLHQPD-----------------CHFQDVNVMEN
        M YSW +KSPK+E Q+                 L P P   ED+F A+    D       E  P P+L Q +                     D    E 
Subjt:  MCYSWLVKSPKKEVQQ-----------------LVPTPSIWEDDFRAFFDLAD-------EENP-PLLHQPD-----------------CHFQDVNVMEN

Query:  NKVSNLNLNLNYEEVLEAWSDRGSLWASASDP-----THVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKT
         ++S L LNLNYEEVLEAWS RGSLWA+A D      T+  YMGEVP  R+EEERRRRV RYKEKRH R+F  KIRYQVRKLNA++R RIKGRFVKT
Subjt:  NKVSNLNLNLNYEEVLEAWSDRGSLWASASDP-----THVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKT

A0A6J1HJ00 zinc finger protein CONSTANS-LIKE 62.5e-3349.28Show/hide
Query:  MCYSWLVKSPKK---EVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD--------------------------------------------------
        M YS L+KSPKK   E +Q VP  SIW DDF+AFF+L++EE  PL  Q +                                                  
Subjt:  MCYSWLVKSPKK---EVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD--------------------------------------------------

Query:  --CHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRP
          C F    VM++ K ++LNLNLNYEEV EAWS RGSLWA    S S+PTH  YMGEVP  RMEEER RRV RY+EKR TR+F  KIRYQVRKLNA +RP
Subjt:  --CHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRP

Query:  RIKGRFVKT
        RIKGRFVKT
Subjt:  RIKGRFVKT

A0A6J1I4F9 zinc finger protein CONSTANS-LIKE 63.6e-3246.6Show/hide
Query:  MCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD----------------------------------------------------C
        M YS L+K  KKE ++    P+   DDF+AFF+L++EE  PL  Q +                                                    C
Subjt:  MCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPD----------------------------------------------------C

Query:  HFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIK
         F    VM++ K ++LNLNLNYEEV EAWS RGSLWA    S S+PTH  YMGEVP  RMEEER RRV RY+EKR TR+F  KIRYQVRKLNA +RPRIK
Subjt:  HFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWA----SASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIK

Query:  GRFVKT
        GRFVKT
Subjt:  GRFVKT

SwissProt top hitse value%identityAlignment
Q8LG76 Zinc finger protein CONSTANS-LIKE 62.6e-1139.67Show/hide
Query:  VMENNKVSNLNLNLNYEEVLEAWSDRGSLWAS----------ASDPTHVPYMGEVPIMRMEEE----------------RRRRVKRYKEKRHTRMFCKKI
        + E  K   L L L+YE V+  W  +G  W +             PTH   MGE                         R  RV RY+EKR TR+F KKI
Subjt:  VMENNKVSNLNLNLNYEEVLEAWSDRGSLWAS----------ASDPTHVPYMGEVPIMRMEEE----------------RRRRVKRYKEKRHTRMFCKKI

Query:  RYQVRKLNADRRPRIKGRFVK
        RY+VRKLNA++RPR+KGRFVK
Subjt:  RYQVRKLNADRRPRIKGRFVK

Q8RWD0 Zinc finger protein CONSTANS-LIKE 163.6e-1339.67Show/hide
Query:  VNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYMGEVPIMRMEEE------------------------RRRRVKRYKEKRHTRMFCKKI
        V V E    + L L LNY+ V+  W  +G  W+S   P     +   P   M E                         R  RV RY+EKR TR+F KKI
Subjt:  VNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYMGEVPIMRMEEE------------------------RRRRVKRYKEKRHTRMFCKKI

Query:  RYQVRKLNADRRPRIKGRFVK
        RY+VRKLNA++RPR+KGRFVK
Subjt:  RYQVRKLNADRRPRIKGRFVK

Q9C9A9 Zinc finger protein CONSTANS-LIKE 71.4e-1241.88Show/hide
Query:  ENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDP-------THVPYM-----------GEVPIMR------MEEERRRRVKRYKEKRHTRMFCKKIRYQV
        + ++ ++L L L+Y  V+ AW + GS W +   P       T +P++           G V   +       + ER  RV RYKEKR TR+F KKIRY+V
Subjt:  ENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDP-------THVPYM-----------GEVPIMR------MEEERRRRVKRYKEKRHTRMFCKKIRYQV

Query:  RKLNADRRPRIKGRFVK
        RKLNA++RPRIKGRFVK
Subjt:  RKLNADRRPRIKGRFVK

Q9LU68 Protein CHLOROPLAST IMPORT APPARATUS 21.4e-1251.14Show/hide
Query:  LNLNYEEVLEAWSDRGSLW---ASASDPTHV-PYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK
        L L+Y+ VLEAWSD+ S +      S+   V   + ++ +      R   V RYKEKR TR+F KKIRYQVRKLNAD+RPR+KGRFV+
Subjt:  LNLNYEEVLEAWSDRGSLW---ASASDPTHV-PYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK

Q9M9B3 Zinc finger protein CONSTANS-LIKE 82.8e-1046.15Show/hide
Query:  SNLNLNLNYEEVLEAWSDRGS---LWASASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK
        +N    LNYE V+ AW  + S   +  + S    VP    +   R+  ER  RV RY++KR  R+F KKIRY+VRK+NAD+RPR+KGRFV+
Subjt:  SNLNLNLNYEEVLEAWSDRGS---LWASASDPTHVPYMGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVK

Arabidopsis top hitse value%identityAlignment
AT1G07050.1 CCT motif family protein1.4e-2044.93Show/hide
Query:  TPSIWEDDFRAFFDLADEENPPLLHQPDCHF---QDVNVMENNKVSNLNLNLNYEEVLEAWSD-RGSLWASASDPTHVPYMGEVPIMRMEEERRRR--VK
        T   WE+D     D+ +EE      Q    F   ++      +K   L LNLN++EV++AWSD +  LW   S   +  Y GEVP++  +   RR   V 
Subjt:  TPSIWEDDFRAFFDLADEENPPLLHQPDCHF---QDVNVMENNKVSNLNLNLNYEEVLEAWSD-RGSLWASASDPTHVPYMGEVPIMRMEEERRRR--VK

Query:  RYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD
        RYKEKR +R+F KKIRYQVRKLNAD+RPR KGRFVK +
Subjt:  RYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTD

AT1G25440.1 B-box type zinc finger protein with CCT domain2.5e-1439.67Show/hide
Query:  VNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYMGEVPIMRMEEE------------------------RRRRVKRYKEKRHTRMFCKKI
        V V E    + L L LNY+ V+  W  +G  W+S   P     +   P   M E                         R  RV RY+EKR TR+F KKI
Subjt:  VNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYMGEVPIMRMEEE------------------------RRRRVKRYKEKRHTRMFCKKI

Query:  RYQVRKLNADRRPRIKGRFVK
        RY+VRKLNA++RPR+KGRFVK
Subjt:  RYQVRKLNADRRPRIKGRFVK

AT1G73870.1 B-box type zinc finger protein with CCT domain9.6e-1441.88Show/hide
Query:  ENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDP-------THVPYM-----------GEVPIMR------MEEERRRRVKRYKEKRHTRMFCKKIRYQV
        + ++ ++L L L+Y  V+ AW + GS W +   P       T +P++           G V   +       + ER  RV RYKEKR TR+F KKIRY+V
Subjt:  ENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDP-------THVPYM-----------GEVPIMR------MEEERRRRVKRYKEKRHTRMFCKKIRYQV

Query:  RKLNADRRPRIKGRFVK
        RKLNA++RPRIKGRFVK
Subjt:  RKLNADRRPRIKGRFVK

AT4G25990.1 CCT motif family protein1.5e-1449.04Show/hide
Query:  DVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWAS---ASDPTHVPY---MGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKG
        D N     +VS L L L+Y+ VLEAWS + S ++     SD   V +   +GE+ +      R   V RYKEKR  R+F KKIRYQVRKLNAD+RPR+KG
Subjt:  DVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWAS---ASDPTHVPY---MGEVPIMRMEEERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKG

Query:  RFVK
        RFV+
Subjt:  RFVK

AT5G14370.1 CCT motif family protein3.5e-1644.35Show/hide
Query:  NNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYM----------GE------VPIMRMEE-----ERRRRVKRYKEKRHTRMFCKKIRYQVRKLN
        N+   +L L L+YE+++EAWSD+G+L+     P  VP +          GE      VP M   E      R   + RYKEKR  R+F K+IRYQVRKLN
Subjt:  NNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYM----------GE------VPIMRMEE-----ERRRRVKRYKEKRHTRMFCKKIRYQVRKLN

Query:  ADRRPRIKGRFVKTD
        A++RPR+KGRFVK +
Subjt:  ADRRPRIKGRFVKTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGAGAGAGATGTGTTATAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGTTCAACAATTAGTTCCTACACCTTCCATTTGGGAAGATGATTTCAGAGCTTTTTT
CGACCTCGCTGACGAAGAAAACCCCCCGCTGCTGCATCAGCCGGACTGCCATTTCCAGGACGTCAATGTTATGGAAAACAACAAGGTTTCTAATTTGAATTTAAATCTTA
ACTATGAAGAGGTTTTGGAAGCGTGGTCTGACCGTGGATCTCTTTGGGCCTCTGCGTCCGACCCAACTCACGTTCCCTATATGGGAGAGGTTCCAATAATGAGAATGGAG
GAAGAAAGAAGAAGAAGGGTGAAGAGATATAAGGAAAAGCGTCACACAAGAATGTTCTGTAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGACAGAAGGCCTAG
AATTAAGGGACGTTTTGTGAAGACCGATTATTGTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAGTAGAAAAAAAGGGGTTTTTTTTATTTCTTATTGATGGAAGAGAGAGAGATGTGTTATAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGTTCAACAATTAGTTCCT
ACACCTTCCATTTGGGAAGATGATTTCAGAGCTTTTTTCGACCTCGCTGACGAAGAAAACCCCCCGCTGCTGCATCAGCCGGACTGCCATTTCCAGGACGTCAATGTTAT
GGAAAACAACAAGGTTTCTAATTTGAATTTAAATCTTAACTATGAAGAGGTTTTGGAAGCGTGGTCTGACCGTGGATCTCTTTGGGCCTCTGCGTCCGACCCAACTCACG
TTCCCTATATGGGAGAGGTTCCAATAATGAGAATGGAGGAAGAAAGAAGAAGAAGGGTGAAGAGATATAAGGAAAAGCGTCACACAAGAATGTTCTGTAAGAAGATAAGA
TACCAAGTTCGTAAGCTCAATGCAGACAGAAGGCCTAGAATTAAGGGACGTTTTGTGAAGACCGATTATTGTTGAATGAAAGAAAAAAAAGTTGAAAAATATCTCAACAC
AAAATAATAAAAGTGTATCTCCAACTTTTTCTTTCACATGATTCTTCATGAAAATATCTAAAAAATTTATGCACTTAGAACCTTTGTGTGTGGTGTGGGGTTTGAATTTG
AATAATGGTGTGGTGTGGGGGTCTCCTCCTCCTGCAGCAGGAGGGACCCCAACTTTGTCCATTACATTGG
Protein sequenceShow/hide protein sequence
MEEREMCYSWLVKSPKKEVQQLVPTPSIWEDDFRAFFDLADEENPPLLHQPDCHFQDVNVMENNKVSNLNLNLNYEEVLEAWSDRGSLWASASDPTHVPYMGEVPIMRME
EERRRRVKRYKEKRHTRMFCKKIRYQVRKLNADRRPRIKGRFVKTDYC