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IVF0021915 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021915
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr06:3335095..3335643
RNA-Seq ExpressionIVF0021915
SyntenyIVF0021915
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063088.1 uncharacterized protein E6C27_scaffold623G00050 [Cucumis melo var. makuwa]5.00e-4553.02Show/hide
Query:  RALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNV
        ++LKD SK IA K+F++  H  +V+IQESK E     FI+S+WSSKD GWE  E    SGGILTL   +K+ V+ET+KG +SL I   T+CKK CW+TNV
Subjt:  RALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNV

Query:  YGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNT
        YGP  + ERR VWPELL       +AWC+ GD N+  WA +R P  RNT
Subjt:  YGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNT

KAA0066335.1 uncharacterized protein E6C27_scaffold21G003960 [Cucumis melo var. makuwa]2.86e-4149.72Show/hide
Query:  RALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVY
        + LKDP+K IA KK IKNHHP VV+IQESKME+  A F +SIWSSK++GWEFVES+S SG     G +KITVVE  KG+FS  +      K      +  
Subjt:  RALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVY

Query:  GPCGYIERRHVWPELLPSL---EC--SEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT
        G   Y    HV   L+ +L    C  +E +  + G             IGRNTRG+RLFNNF+D ANIME+PLQNGR+T
Subjt:  GPCGYIERRHVWPELLPSL---EC--SEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT

TYJ98683.1 hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]1.64e-4350.33Show/hide
Query:  VVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVYGPCGYIERRHVWPELLPSLEC
        +V+   ++ +    + I+S+WSSKD+GWE VES    GGILT+   +KI VVET+KG +SL I   T CKK CW+TNVYGP  Y ERR VW  L+     
Subjt:  VVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVYGPCGYIERRHVWPELLPSLEC

Query:  SEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT
           AWC+GG  N+T WA +  P+ + TRG+R FNN +D  NI E+PLQNGR T
Subjt:  SEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT

XP_028120266.1 uncharacterized protein LOC114317709 [Camellia sinensis]6.73e-3637.7Show/hide
Query:  MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCK
        MKI+SWN R L    K    + F++ H P +V+ QE+K+E+ G +FI+SIW ++   W FV SV  SGGIL++  +  ++  E++ G+FSL I+   +  
Subjt:  MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCK

Query:  KRCWMTNVYGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT
           W++ VYGP G   R+  W EL          WC+GGDFNV     ++L + R  R +R F+ F+    +++ PL N RFT
Subjt:  KRCWMTNVYGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT

XP_038876676.1 uncharacterized protein LOC120069076 [Benincasa hispida]5.79e-5849.73Show/hide
Query:  MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCK
        MKI++W+TR L D SK +  K+F+K  +P +V+IQE+K +    SFI+S+WSSK+VG  FVE+   SGG+LT+   +KI V    K +FSL IK  T+ K
Subjt:  MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCK

Query:  KRCWMTNVYGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT
        K CW+TNVYGPC Y ERR +W EL    E  ++ WC+GGDFN      +R P+G+ TR +  FN F+ L N++EIPL NG+FT
Subjt:  KRCWMTNVYGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT

TrEMBL top hitse value%identityAlignment
A0A2N9J9W3 Reverse transcriptase domain-containing protein3.4e-2634.24Show/hide
Query:  MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAKIT-VVETIKGQFSLLIKGDTMCK
        ++I+SWN R L +P K    K  +++    VV +QE+K++      +RS+WS+  VGWE V +V+T+GGIL +   ++   +++I G FS+  K   +  
Subjt:  MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAKIT-VVETIKGQFSLLIKGDTMCK

Query:  KRCW-MTNVYGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT
           W  T VYGP G  +R   W ELL   +     WC+ GDFNV  +  KRL   R +  +  F++F+  ++++++PL+ G +T
Subjt:  KRCW-MTNVYGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT

A0A5A7V639 Uncharacterized protein7.2e-3753.02Show/hide
Query:  RALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNV
        ++LKD SK IA K+F++  H  +V+IQESK E     FI+S+WSSKD GWE  E    SGGILTL   +K+ V+ET+KG +SL I   T+CKK CW+TNV
Subjt:  RALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNV

Query:  YGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNT
        YGP  + ERR VWPELL       +AWC+ GD N+  WA +R P  RNT
Subjt:  YGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNT

A0A5A7VKQ0 Uncharacterized protein3.1e-3249.72Show/hide
Query:  RALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVY
        + LKDP+K IA KK IKNHHP VV+IQESKME+  A F +SIWSSK++GWEFVES+S SG     G +KITVVE  KG+FS  +   T+ +   +  +  
Subjt:  RALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVY

Query:  GPCGYIERRHVWPELLPSL---EC--SEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT
        G   Y    HV   L+ +L    C  +E +  + G             IGRNTRG+RLFNNF+D ANIME+PLQNGR+T
Subjt:  GPCGYIERRHVWPELLPSL---EC--SEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT

A0A5D3BHE3 Uncharacterized protein2.7e-3650.33Show/hide
Query:  VVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVYGPCGYIERRHVWPELLPSLEC
        +V+   ++ +    + I+S+WSSKD+GWE VES    GGILT+   +KI VVET+KG +SL I   T CKK CW+TNVYGP  Y ERR VW  L+     
Subjt:  VVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTL-GRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVYGPCGYIERRHVWPELLPSLEC

Query:  SEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT
           AWC+GG  N+T WA +  P+ + TRG+R FNN +D  NI E+PLQNGR T
Subjt:  SEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT

A0A803P8A0 Uncharacterized protein2.0e-2634.97Show/hide
Query:  MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAK-ITVVETIKGQFSLLIKGDTMCK
        MKI++WN R   D  K  A K  I   +P +V++QE K  +    FI SIW S+   W  + ++  SGG L +   + I+V++++ G+FS+ +  +   K
Subjt:  MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAK-ITVVETIKGQFSLLIKGDTMCK

Query:  KRCWMTNVYGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT
        +  W + VYGPC Y  R   W EL        E+WC+GGDFNVT    ++L    +TR ++LF+  +    +++  L+NG FT
Subjt:  KRCWMTNVYGPCGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCATTTCTTGGAATACAAGAGCTCTGAAAGACCCTTCCAAGCATATAGCCTGCAAGAAATTCATCAAGAATCATCACCCAGGTGTGGTTATGATTCAAGAATC
AAAAATGGAAAGTTCTGGTGCAAGTTTCATTAGATCAATTTGGAGCTCCAAGGATGTTGGTTGGGAATTCGTGGAATCAGTTAGCACCTCAGGGGGTATTCTCACACTGG
GACGAGCAAAAATCACGGTGGTTGAGACCATCAAAGGGCAGTTTTCTCTTTTAATAAAAGGTGATACAATGTGCAAGAAACGTTGTTGGATGACCAATGTATATGGCCCA
TGTGGTTACATAGAAAGAAGACATGTTTGGCCAGAATTACTACCCAGTTTAGAATGCAGTGAAGAGGCATGGTGTATGGGTGGAGACTTCAATGTTACCAATTGGGCGTG
CAAGAGGCTTCCTATTGGCAGAAACACAAGAGGATTGAGGCTCTTTAATAACTTCGTCGATCTTGCTAATATCATGGAGATTCCTCTACAGAATGGCAGATTCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCATTTCTTGGAATACAAGAGCTCTGAAAGACCCTTCCAAGCATATAGCCTGCAAGAAATTCATCAAGAATCATCACCCAGGTGTGGTTATGATTCAAGAATC
AAAAATGGAAAGTTCTGGTGCAAGTTTCATTAGATCAATTTGGAGCTCCAAGGATGTTGGTTGGGAATTCGTGGAATCAGTTAGCACCTCAGGGGGTATTCTCACACTGG
GACGAGCAAAAATCACGGTGGTTGAGACCATCAAAGGGCAGTTTTCTCTTTTAATAAAAGGTGATACAATGTGCAAGAAACGTTGTTGGATGACCAATGTATATGGCCCA
TGTGGTTACATAGAAAGAAGACATGTTTGGCCAGAATTACTACCCAGTTTAGAATGCAGTGAAGAGGCATGGTGTATGGGTGGAGACTTCAATGTTACCAATTGGGCGTG
CAAGAGGCTTCCTATTGGCAGAAACACAAGAGGATTGAGGCTCTTTAATAACTTCGTCGATCTTGCTAATATCATGGAGATTCCTCTACAGAATGGCAGATTCACATGA
Protein sequenceShow/hide protein sequence
MKIISWNTRALKDPSKHIACKKFIKNHHPGVVMIQESKMESSGASFIRSIWSSKDVGWEFVESVSTSGGILTLGRAKITVVETIKGQFSLLIKGDTMCKKRCWMTNVYGP
CGYIERRHVWPELLPSLECSEEAWCMGGDFNVTNWACKRLPIGRNTRGLRLFNNFVDLANIMEIPLQNGRFT