; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0021930 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021930
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr07:22739281..22740096
RNA-Seq ExpressionIVF0021930
SyntenyIVF0021930
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044541.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.48e-15389.75Show/hide
Query:  VIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRR
        +IAMDTEFP FLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN      KKQRKDGIPSAEFR 
Subjt:  VIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRR

Query:  AFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY
        AFLPIF SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQ HLGTVNDLKH+IRNCE+LMNGELGLKRL ELLNVNDTIFNGGSDSLLIALAY
Subjt:  AFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY

Query:  AKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
        AKMKKTLKFS +ITDGFLYGF+YRI+GYRTFCY ITYYPNSL F
Subjt:  AKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF

KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]5.63e-19397.79Show/hide
Query:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QEL ILNDQLFKFPVIAMDTEFPGFLRST RGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
        IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
Subjt:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
        KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGF+YRIRGYRTFCYLITYYPNSLPF
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF

KAE8649090.1 hypothetical protein Csa_014788 [Cucumis sativus]4.94e-15088.16Show/hide
Query:  FVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ
        FVR+VWYHN  QELAILND LFKFPVI MDTEFPGFLRSTPRGAP+EH YQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ

Query:  YLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKR
        YLKN KGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFAIIAQR LGTVNDLK+MI +CE LM GELGLKR
Subjt:  YLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKR

Query:  LAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYG
        LAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T GFLY 
Subjt:  LAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYG

XP_004151393.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]5.02e-16288.37Show/hide
Query:  FVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ
        FVR+VWYHN  QELAILND LFKFPVI MDTEFPGFLRSTPRGAP+EH YQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ

Query:  YLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKR
        YLKN KGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFAIIAQR LGTVNDLK+MI +CE LM GELGLKR
Subjt:  YLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKR

Query:  LAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCY
        LAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T GFLYGF YRIRGY+TFCY
Subjt:  LAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCY

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]3.69e-198100Show/hide
Query:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
        IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
Subjt:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
        KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF

TrEMBL top hitse value%identityAlignment
A0A0A0KTU4 Poly(A)-specific ribonuclease1.5e-12688.37Show/hide
Query:  FVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ
        FVR+VWYHN  QELAILND LFKFPVI MDTEFPGFLRSTPRGAP+EH YQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQ

Query:  YLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKR
        YLKN KGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFAIIAQR LGTVNDLK+MI +CE LM GELGLKR
Subjt:  YLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKR

Query:  LAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCY
        LAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T GFLYGF YRIRGY+TFCY
Subjt:  LAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCY

A0A1S3BY95 Poly(A)-specific ribonuclease4.8e-154100Show/hide
Query:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
        IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
Subjt:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
        KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF

A0A5A7TN62 Poly(A)-specific ribonuclease4.2e-15097.79Show/hide
Query:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QEL ILNDQLFKFPVIAMDTEFPGFLRST RGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
        IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
Subjt:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
        KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGF+YRIRGYRTFCYLITYYPNSLPF
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF

A0A5A7TSL5 Putative CCR4-associated factor 1-like protein 87.8e-12089.75Show/hide
Query:  VIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRR
        +IAMDTEFP FLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKN      KKQRKDGIPSAEFR 
Subjt:  VIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRR

Query:  AFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY
        AFLPIF SN+ITKWITFHGI+DVAYLLKLMMIRTMP+SMVEFAIIAQ HLGTVNDLKH+IRNCE+LMNGELGLKRL ELLNVNDTIFNGGSDSLLIALAY
Subjt:  AFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDSLLIALAY

Query:  AKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
        AKMKKTLKFS +ITDGFLYGF+YRI+GYRTFCY ITYYPNSL F
Subjt:  AKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF

A0A5D3D333 Poly(A)-specific ribonuclease4.8e-154100Show/hide
Query:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
        IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
Subjt:  IQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
        KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 97.7e-3234.62Show/hide
Query:  RKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFL-RSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD
        R+VW  N   E  ++++ +  +P I+MDTEFPG + +S  R    +  Y  LK N++ L ++Q+GLTL D N          H G  W F F DFD   D
Subjt:  RKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFL-RSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD

Query:  FSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLG-TVNDLKHMIRNCEY
          +P SI+ L+ ++G +F++  +DG+ S  F    +      N    W+TFH  YD  YL+K++  R +P ++ EF  + +   G  V D+KHM++ CE 
Subjt:  FSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLG-TVNDLKHMIRNCEY

Query:  LMNGELGLKRLAELLNVNDTI---FNGGSDSLLIALAYAKMKKT--LKFSSEITDGFLYG
         + G  GL R+A  L VN  +      GSDSLL   A+ +M+    ++   E   G LYG
Subjt:  LMNGELGLKRLAELLNVNDTI---FNGGSDSLLIALAYAKMKKT--LKFSSEITDGFLYG

Q9LXM4 Putative CCR4-associated factor 1 homolog 86.5e-3137.61Show/hide
Query:  LAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQ
        ++++ D L  +  IA+DTEFP  LR T + A +E  Y D+ F+++  K++QLGLTL D N  +G +W   FSDF    D  +  SI++L+ + G + +K 
Subjt:  LAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQ

Query:  RKDGIP-SAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVN--DT
        R++GI     F   F  +  + R   W+TFHG YD+AYLLK      +P +   F+    R LG+V DLK M   CE L +  LGL+ LA    +N   T
Subjt:  RKDGIP-SAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVN--DT

Query:  IFNGGSDSLLIALAYAKM
          + GS++ L A+ +AK+
Subjt:  IFNGGSDSLLIALAYAKM

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.0e-3134.98Show/hide
Query:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  N  +E+ ++ D +  FP +AMDTEFPG +   P G   +  ++ Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEY
        D  +  SI+ LK + G +  K   DGI S  F    +      N    W+TFH  YD  YLLKL+  + +P+S  +F  +   +  TV D+KH+++ C  
Subjt:  DFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEY

Query:  LMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTL------KFSSEITDGFLYG
        L     GL +LAELL V         GSDSLL +  + K+K+        K+S     G LYG
Subjt:  LMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTL------KFSSEITDGFLYG

Q9SHJ0 Probable CCR4-associated factor 1 homolog 12.9e-3133.73Show/hide
Query:  RKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYL
        R+VW  N  +E+A + + L +FP+IA DTE+PG +  T   +  +  Y+ +K N+ + K++Q G TL +    +G  W   FS+F + +D  +  SI++L
Subjt:  RKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYL

Query:  KNKKGFEFKKQRKDGIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL
        + + G + +K R +G+    F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFA    +  G V D K M   CE L    LGL
Subjt:  KNKKGFEFKKQRKDGIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGL

Query:  KRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYG
         +LA+LL +       + GSDSL+ AL + K+K   +  S    G +YG
Subjt:  KRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSSEITDGFLYG

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.6e-3235.14Show/hide
Query:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ
        +R+VW  N   E+A++ + +  FP +AMDTEFPG +   P G      E+ Y+ LK N+N LK++QLGLT  DE  ++           W F F +FD +
Subjt:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ

Query:  TDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCE
        +D  +  SI+ L+ + G +F K  + GI S  F    +      N    W+TFH  YD  YLLKL+  + +PE+   F  +   +   V D+KH+++ C 
Subjt:  TDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCE

Query:  YLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSS-EITDGFLYG
         L     GL +LAELL+V         GSDSLL +  + K+++     S E   G LYG
Subjt:  YLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSS-EITDGFLYG

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.1e-3334.98Show/hide
Query:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  N  +E+ ++ D +  FP +AMDTEFPG +   P G   +  ++ Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEY
        D  +  SI+ LK + G +  K   DGI S  F    +      N    W+TFH  YD  YLLKL+  + +P+S  +F  +   +  TV D+KH+++ C  
Subjt:  DFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEY

Query:  LMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTL------KFSSEITDGFLYG
        L     GL +LAELL V         GSDSLL +  + K+K+        K+S     G LYG
Subjt:  LMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTL------KFSSEITDGFLYG

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.1e-3334.98Show/hide
Query:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  N  +E+ ++ D +  FP +AMDTEFPG +   P G   +  ++ Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEY
        D  +  SI+ LK + G +  K   DGI S  F    +      N    W+TFH  YD  YLLKL+  + +P+S  +F  +   +  TV D+KH+++ C  
Subjt:  DFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEY

Query:  LMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTL------KFSSEITDGFLYG
        L     GL +LAELL V         GSDSLL +  + K+K+        K+S     G LYG
Subjt:  LMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTL------KFSSEITDGFLYG

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.1e-3334.98Show/hide
Query:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT
        +R+VW  N  +E+ ++ D +  FP +AMDTEFPG +   P G   +  ++ Y+ LK N+N LK++QLGLT  +E  ++          W F F +FD  +
Subjt:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS-------WVFTFSDFDEQT

Query:  DFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEY
        D  +  SI+ LK + G +  K   DGI S  F    +      N    W+TFH  YD  YLLKL+  + +P+S  +F  +   +  TV D+KH+++ C  
Subjt:  DFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEY

Query:  LMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTL------KFSSEITDGFLYG
        L     GL +LAELL V         GSDSLL +  + K+K+        K+S     G LYG
Subjt:  LMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTL------KFSSEITDGFLYG

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-3335.14Show/hide
Query:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ
        +R+VW  N   E+A++ + +  FP +AMDTEFPG +   P G      E+ Y+ LK N+N LK++QLGLT  DE  ++           W F F +FD +
Subjt:  VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRG---APEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLS--------WVFTFSDFDEQ

Query:  TDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCE
        +D  +  SI+ L+ + G +F K  + GI S  F    +      N    W+TFH  YD  YLLKL+  + +PE+   F  +   +   V D+KH+++ C 
Subjt:  TDFSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCE

Query:  YLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSS-EITDGFLYG
         L     GL +LAELL+V         GSDSLL +  + K+++     S E   G LYG
Subjt:  YLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSS-EITDGFLYG

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.5e-3334.62Show/hide
Query:  RKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFL-RSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD
        R+VW  N   E  ++++ +  +P I+MDTEFPG + +S  R    +  Y  LK N++ L ++Q+GLTL D N          H G  W F F DFD   D
Subjt:  RKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFL-RSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENE---------HVGLSWVFTFSDFDEQTD

Query:  FSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLG-TVNDLKHMIRNCEY
          +P SI+ L+ ++G +F++  +DG+ S  F    +      N    W+TFH  YD  YL+K++  R +P ++ EF  + +   G  V D+KHM++ CE 
Subjt:  FSSPTSIQYLKNKKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLG-TVNDLKHMIRNCEY

Query:  LMNGELGLKRLAELLNVNDTI---FNGGSDSLLIALAYAKMKKT--LKFSSEITDGFLYG
         + G  GL R+A  L VN  +      GSDSLL   A+ +M+    ++   E   G LYG
Subjt:  LMNGELGLKRLAELLNVNDTI---FNGGSDSLLIALAYAKMKKT--LKFSSEITDGFLYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCGTTCGAAAAGTTTGGTATCATAATTTCATCCAAGAATTGGCCATTCTCAACGACCAACTTTTCAAGTTTCCAGTGATTGCGATGGACACTGAGTTCCCTGG
CTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATTTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAATTGGGTCTCACTCTGATGGATG
AGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATCCAATATTTGAAGAACAAGAAAGGGTTT
GAATTCAAGAAACAGAGGAAAGATGGAATTCCATCGGCTGAATTTCGACGTGCATTTCTGCCGATCTTTTCTAGCAATCGGATAACCAAATGGATCACATTTCATGGCAT
TTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGCCGGAGTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGTCAACGACCTCA
AGCACATGATTCGCAATTGTGAATATTTAATGAACGGTGAACTTGGACTTAAGAGACTTGCCGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGT
TTGCTGATAGCTTTGGCGTATGCAAAGATGAAGAAGACGCTCAAGTTTTCGTCGGAGATTACTGATGGATTTTTGTATGGTTTTTATTACAGAATTCGAGGATATAGAAC
CTTTTGCTATCTAATAACATATTACCCAAACTCATTACCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCGTTCGAAAAGTTTGGTATCATAATTTCATCCAAGAATTGGCCATTCTCAACGACCAACTTTTCAAGTTTCCAGTGATTGCGATGGACACTGAGTTCCCTGG
CTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATTTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAATTGGGTCTCACTCTGATGGATG
AGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACGTCAATCCAATATTTGAAGAACAAGAAAGGGTTT
GAATTCAAGAAACAGAGGAAAGATGGAATTCCATCGGCTGAATTTCGACGTGCATTTCTGCCGATCTTTTCTAGCAATCGGATAACCAAATGGATCACATTTCATGGCAT
TTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGCCGGAGTCCATGGTGGAATTCGCCATCATAGCTCAACGTCACCTTGGTACAGTCAACGACCTCA
AGCACATGATTCGCAATTGTGAATATTTAATGAACGGTGAACTTGGACTTAAGAGACTTGCCGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGT
TTGCTGATAGCTTTGGCGTATGCAAAGATGAAGAAGACGCTCAAGTTTTCGTCGGAGATTACTGATGGATTTTTGTATGGTTTTTATTACAGAATTCGAGGATATAGAAC
CTTTTGCTATCTAATAACATATTACCCAAACTCATTACCTTTCTAA
Protein sequenceShow/hide protein sequence
MSFVRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGF
EFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFAIIAQRHLGTVNDLKHMIRNCEYLMNGELGLKRLAELLNVNDTIFNGGSDS
LLIALAYAKMKKTLKFSSEITDGFLYGFYYRIRGYRTFCYLITYYPNSLPF