; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0021969 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021969
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr02:21595259..21596676
RNA-Seq ExpressionIVF0021969
SyntenyIVF0021969
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138171.1 chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus]5.21e-18498.41Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKL RVLSVKPVSASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo]9.38e-187100Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_022921659.1 chlorophyll a-b binding protein 4, chloroplastic [Cucurbita moschata]1.61e-17896.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_023516219.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]5.60e-17996.43Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_038880569.1 chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]1.56e-18599.21Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

TrEMBL top hitse value%identityAlignment
A0A0A0LSB4 Chlorophyll a-b binding protein, chloroplastic9.4e-14498.41Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKL RVLSVKPVSASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A1S3BV45 Chlorophyll a-b binding protein, chloroplastic7.7e-146100Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A5A7UWR2 Chlorophyll a-b binding protein, chloroplastic7.7e-146100Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A6J1E151 Chlorophyll a-b binding protein, chloroplastic1.4e-13996.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A6J1JG60 Chlorophyll a-b binding protein, chloroplastic1.4e-13996.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR+LSVKPV+ASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKELANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic1.3e-6248.52Show/hide
Query:  RSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKI
        ++ FL G   ++ +  +     ++++     +  +  W PG   P +L+GSLPGD GFDPLGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE+ TKI
Subjt:  RSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKI

Query:  GIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKELANGRLAM
        GI+N P WY AG+ EYF  ++TLF++E +L  + E RRW DI  PGCVN DPIF    L   + GYPGG+ F+PL +     A   E + KE+ NGRLAM
Subjt:  GIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKELANGRLAM

Query:  LAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        LA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  LAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

P13869 Chlorophyll a-b binding protein, chloroplastic1.0e-6248.54Show/hide
Query:  AARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT
        A ++ FL G   ++ + ++     + + S+   +  +  W PG   P +L+GSLPGD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  T
Subjt:  AARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKELANGRL
        KIG++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PGCVN DPIF    L   + GYPGG+ F+PL +     A   E + KE+ NGRL
Subjt:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKELANGRL

Query:  AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

P27521 Chlorophyll a-b binding protein 4, chloroplastic3.2e-12585.2Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPV-SASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG
        MATVTT ASA++FRPC ++ RFL+GSSG+L+R LS   + S++ +SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPV-SASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLP  E GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE

Query:  AKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AKEKELANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SDPWHNTIVQTF
Subjt:  AKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)1.3e-8977Show/hide
Query:  KGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHY
        KG WLPGL SPAYL+GSL GDNGFDPL LAEDPE+LRWFVQA++VNGRWAMLGVAGML+PEV TK G++NAP+W    GK  YFASSST   +  +   Y
Subjt:  KGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHY

Query:  VEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGG
        VEIRRWQDIKNPG VNQDPIFK YSLPP+ECGYPG +FNPLNFAP LE KEKELANGRLAMLAFLGF+VQHNV GKGPF+NL QH++DPWHNTI+QT  G
Subjt:  VEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic1.7e-12987.3Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAA+F PC  +SRFL GSSGKL+R ++ +PV  S S+SFKVEAKKGEWLPGL SP YL GSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPG VNQDPIFKQYSLP  E GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFI+QHNVTGKGPFDNLLQHISDPWHNTIVQT GGN
Subjt:  KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 68.9e-5440.93Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSS--GKL--HRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAEL
        + +  T +++ V  P   R    S SS  G+L   R++ V+     SS    +   +  W PG   P +L+GSLPGD GFDPLGL  DP+ L+WF QAEL
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSS--GKL--HRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAEL

Query:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNF--
        ++ RWAML V G+++PE   ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PG V+ +P +     P  + GYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNF--

Query:  ----APTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
             P +  + KE+ NGRLAMLAFLGF  Q   T + P +NL+ H++DP H  +   F
Subjt:  ----APTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

AT1G45474.1 photosystem I light harvesting complex gene 51.1e-5648.28Show/hide
Query:  SSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ
        SS    R+ SVK      + +  VE  +  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P 
Subjt:  SSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ

Query:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKELANGRLAMLAFL
        WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PG   ++  F    + +L   E GYPGG + NPL  A  ++     K KE+ NGRLAM+A L
Subjt:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKELANGRLAMLAFL

Query:  GFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT
        GF VQ +VT  GP DNL++H+S+PWH TI+QT
Subjt:  GFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT

AT1G45474.2 photosystem I light harvesting complex gene 51.1e-5648.28Show/hide
Query:  SSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ
        SS    R+ SVK      + +  VE  +  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++    GI N P 
Subjt:  SSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ

Query:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKELANGRLAMLAFL
        WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PG   ++  F    + +L   E GYPGG + NPL  A  ++     K KE+ NGRLAM+A L
Subjt:  WYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKELANGRLAMLAFL

Query:  GFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT
        GF VQ +VT  GP DNL++H+S+PWH TI+QT
Subjt:  GFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A42.3e-12685.2Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPV-SASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG
        MATVTT ASA++FRPC ++ RFL+GSSG+L+R LS   + S++ +SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPV-SASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLP  E GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE

Query:  AKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AKEKELANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SDPWHNTIVQTF
Subjt:  AKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

AT3G61470.1 photosystem I light harvesting complex gene 23.6e-6349.21Show/hide
Query:  TQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM
        + A AA+  P      FL G   +L + L+V  VS   +S   V A      W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PG VN DP+F    L   + GYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APT

Query:  LEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
         E + KE+ NGRLAMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  LEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGTCACCACTCAAGCTTCTGCCGCCGTTTTCCGGCCATGTGCCGCCCGATCAAGATTCCTTTCCGGTTCTTCCGGTAAACTCCACCGTGTGCTCTCGGTTAA
GCCAGTTTCTGCTTCTTCGTCTTCATCTTTCAAGGTTGAAGCTAAGAAAGGAGAATGGTTGCCTGGTCTCCCATCTCCGGCGTACTTAAACGGCAGTCTTCCCGGTGACA
ATGGATTTGACCCATTGGGATTAGCGGAAGACCCAGAGAATTTGAGGTGGTTTGTTCAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTGGGTGTCGCAGGAATGCTT
CTACCGGAAGTTTTCACGAAGATTGGAATCATCAACGCCCCTCAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTCGTAATCGAGTTTAT
CCTCTTCCATTACGTCGAAATCCGAAGATGGCAAGACATTAAAAACCCTGGCTGTGTTAACCAAGACCCCATTTTTAAGCAATACAGTTTGCCACCAAATGAATGTGGTT
ACCCTGGTGGGATTTTCAATCCCCTGAATTTCGCTCCAACTCTCGAAGCTAAAGAGAAGGAACTAGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATAGTG
CAACACAATGTGACAGGCAAAGGGCCATTTGACAATCTTTTGCAACACATCTCAGACCCATGGCACAACACCATTGTCCAGACATTTGGTGGCAACTAA
mRNA sequenceShow/hide mRNA sequence
CCGACCGATTTGTAGCCGTTAGATCGTGAAAATCTCGTAAATCAACCCTCAGATTTGAACAGCGAACAAGAACCACAGACTCAACATTGAAGTGAAGTTACAAAGCCTTG
CAAATTAGTTCTCAATTTCTTACTCCTGAAAACCCATTTTCTTCCTCAATCCAAAAAGATCATTCAGGAGAAATGGCCACCGTCACCACTCAAGCTTCTGCCGCCGTTTT
CCGGCCATGTGCCGCCCGATCAAGATTCCTTTCCGGTTCTTCCGGTAAACTCCACCGTGTGCTCTCGGTTAAGCCAGTTTCTGCTTCTTCGTCTTCATCTTTCAAGGTTG
AAGCTAAGAAAGGAGAATGGTTGCCTGGTCTCCCATCTCCGGCGTACTTAAACGGCAGTCTTCCCGGTGACAATGGATTTGACCCATTGGGATTAGCGGAAGACCCAGAG
AATTTGAGGTGGTTTGTTCAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTGGGTGTCGCAGGAATGCTTCTACCGGAAGTTTTCACGAAGATTGGAATCATCAACGC
CCCTCAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTCGTAATCGAGTTTATCCTCTTCCATTACGTCGAAATCCGAAGATGGCAAGACA
TTAAAAACCCTGGCTGTGTTAACCAAGACCCCATTTTTAAGCAATACAGTTTGCCACCAAATGAATGTGGTTACCCTGGTGGGATTTTCAATCCCCTGAATTTCGCTCCA
ACTCTCGAAGCTAAAGAGAAGGAACTAGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATAGTGCAACACAATGTGACAGGCAAAGGGCCATTTGACAATCT
TTTGCAACACATCTCAGACCCATGGCACAACACCATTGTCCAGACATTTGGTGGCAACTAAGTTTGGTTTGTTTGGAAGGTTGTTGTTGTTGTTGTATTAAGAGTAAAAA
TGGTTGATATGAACTGAGATACTTTCGAGAGTATGTTTTTGGAGTGTGGTGTTGCTAATGGAATTTGTAATATGCAACAACATAGTGGAATATCAGTGTACAGAAGGTGG
AGGGGCTTGTCATTGTAGCTTGGATGTTGTTCTTTAAATGACATGAATTTGGCTCTTGCAGCTTCCTTCAACTTTCACATCTTTAATCATGTTGAAACTTAAACCACTAA
CTTGGGAATTCTACACTCAAGCT
Protein sequenceShow/hide protein sequence
MATVTTQASAAVFRPCAARSRFLSGSSGKLHRVLSVKPVSASSSSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGML
LPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIV
QHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN