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IVF0021983 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021983
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionrecQ-mediated genome instability protein 2
Genome locationchr12:8934379..8936570
RNA-Seq ExpressionIVF0021983
SyntenyIVF0021983
Gene Ontology termsGO:0009555 - pollen development (biological process)
GO:0033045 - regulation of sister chromatid segregation (biological process)
GO:0043007 - maintenance of rDNA (biological process)
GO:2000042 - negative regulation of double-strand break repair via homologous recombination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0016607 - nuclear speck (cellular component)
InterPro domainsIPR032245 - RecQ-mediated genome instability protein 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139456.1 recQ-mediated genome instability protein 2 isoform X2 [Cucumis sativus]4.86e-8491.11Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TGTVELSL R+FLLRPWSLGMYVMVVGAFLFRTNE PFI VH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
        KI+DLSKSPNREAMWYLEVMEAYK+FYEPLVE+FL
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL

XP_008462275.1 PREDICTED: recQ-mediated genome instability protein 2 [Cucumis melo]3.43e-93100Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
        KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL

XP_022152884.1 recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia]3.26e-7380.74Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDYSLAALK+LC QL  AR TPS   ATL GILFQRAWLQGILVSVDK N +L+LDDGTGTVELSL R+F LRPW+LGMYVMVVGAF+ R NEPP I VH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
        KIVDLS+ P+REAMWYLEVMEAYKMFYEPL+EEFL
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL

XP_031736186.1 recQ-mediated genome instability protein 2 isoform X1 [Cucumis sativus]1.61e-7775Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLG----------------------
        MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TGTVELSL R+FLLRPWSLG                      
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLG----------------------

Query:  -------MYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
               MYVMVVGAFLFRTNE PFI VHKI+DLSKSPNREAMWYLEVMEAYK+FYEPLVE+FL
Subjt:  -------MYVMVVGAFLFRTNEPPFISVHKIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL

XP_038894076.1 uncharacterized protein LOC120082820 [Benincasa hispida]1.02e-7685.07Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDYSLAALKLLCRQLKDAR +P++  ATL GILFQRAWLQG LVSVDKEN KLILDDGTGTVELSL R+F LRPW LGMYVMVVGAF+FRTNEPP I+VH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLSK P+REAMWYLEV+EAYKMFYEPL+EEF
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEF

TrEMBL top hitse value%identityAlignment
A0A0A0LVL5 Uncharacterized protein2.6e-6391.11Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDYSL ALKLLCRQLKDARGTPSH TA L GILFQRAWLQGILVSVDKENGKLILDD TGTVELSL R+FLLRPWSLGMYVMVVGAFLFRTNE PFI VH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
        KI+DLSKSPNREAMWYLEVMEAYK+FYEPLVE+FL
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL

A0A1S3CGI5 recQ-mediated genome instability protein 22.8e-70100Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
        KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL

A0A5A7UD07 RecQ-mediated genome instability protein 22.8e-70100Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
        KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL

A0A6J1DF83 recQ-mediated genome instability protein 2 isoform X14.4e-5580.74Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDYSLAALK+LC QL  AR TPS   ATL GILFQRAWLQGILVSVDK N +L+LDDGTGTVELSL R+F LRPW+LGMYVMVVGAF+ R NEPP I VH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL
        KIVDLS+ P+REAMWYLEVMEAYKMFYEPL+EEFL
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEFL

A0A6J1I0C8 uncharacterized protein LOC1114693427.5e-5582.09Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH
        MDY+LAALKLLCRQL DAR  PS+  ATL GILFQRAWLQGILV VD++NGKLILDDGTGTVELSL  +F  RPWSLGMYVMVVGA++ RTNEP  I+VH
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEF
        KIVDLSK P REAMWYLEVMEAYKMFYEPLVEEF
Subjt:  KIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEF

SwissProt top hitse value%identityAlignment
A5PJU7 RecQ-mediated genome instability protein 28.9e-0532.81Show/hide
Query:  LKLLCRQL-KDARGTP-----SHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVEL-SLPRNFLLRPWSL-GMYVMVVGAFLFRTNEPPFISV
        +K+L  QL +DA G P     S A      +  +  W+QG +  V+   G   L D +G+  +  L R    RP  + G YVMV+G     + EP   +V
Subjt:  LKLLCRQL-KDARGTP-----SHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVEL-SLPRNFLLRPWSL-GMYVMVVGAFLFRTNEPPFISV

Query:  HKIVDLSKSPNREAMWYLEVMEAYKMFY
         K+ DLS +P  E++W LEV + ++  Y
Subjt:  HKIVDLSKSPNREAMWYLEVMEAYKMFY

Q5ZM20 RecQ-mediated genome instability protein 21.4e-0534.09Show/hide
Query:  LKLLCRQLKDARGTPSHATATLS-------GILFQRAWLQGILVSVDK-ENGKLILDDGTGTVEL----SLPRNFLLRP-WSLGMYVMVVGAFLFRTNEP
        LK+L  QL+ A G  +  T  LS        +  +  W+QG ++ V++   G   L DG+G   +     +PR    RP  S G YVMV+G  + R   P
Subjt:  LKLLCRQLKDARGTPSHATATLS-------GILFQRAWLQGILVSVDK-ENGKLILDDGTGTVEL----SLPRNFLLRP-WSLGMYVMVVGAFLFRTNEP

Query:  -PFISVHKIVDLSKSPNREAMWYLEVMEAYKM
         P +   K+ DLS++P  E MW LEV E +++
Subjt:  -PFISVHKIVDLSKSPNREAMWYLEVMEAYKM

Q96E14 RecQ-mediated genome instability protein 26.2e-0635.48Show/hide
Query:  LKLLCRQL-KDARGTP-----SHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSL-GMYVMVVGAFLFRTNEPPFISVH
        LK+L  QL +DA G P     S A A    +     W+QG +V  D+   +L    G  +V   L R    RP  + G YVMV+G     + EP   +V 
Subjt:  LKLLCRQL-KDARGTP-----SHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSL-GMYVMVVGAFLFRTNEPPFISVH

Query:  KIVDLSKSPNREAMWYLEVMEAYK
        K+ DLS +P  E+MW LEV + ++
Subjt:  KIVDLSKSPNREAMWYLEVMEAYK

Arabidopsis top hitse value%identityAlignment
AT1G08390.1 unknown protein2.4e-4562.5Show/hide
Query:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGK--LILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFIS
        MDYSLAA+K+LC QL+DA+ TPS   A+L G+LFQRAWLQG+LV      G   L+LDDGTG +EL L  +F LR W  GMYVMVVG +  RT + P + 
Subjt:  MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGK--LILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFIS

Query:  VHKIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEF
        VHK+VDLS SP+REAMWYLEVM+AY++FYEPL++EF
Subjt:  VHKIVDLSKSPNREAMWYLEVMEAYKMFYEPLVEEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTACAGCCTAGCAGCCTTGAAGCTTCTATGCCGGCAGCTCAAAGACGCCCGCGGAACTCCGTCTCACGCCACCGCCACTCTTAGCGGCATTCTCTTCCAACGCGC
CTGGCTTCAGGGGATCTTGGTCTCCGTCGACAAAGAAAATGGTAAATTGATTCTCGACGATGGCACCGGCACCGTCGAGCTCTCCCTCCCTCGCAACTTCCTTCTCCGCC
CTTGGAGCCTCGGGATGTACGTGATGGTTGTTGGCGCTTTTCTCTTCCGGACGAATGAACCGCCCTTTATTTCGGTCCACAAGATTGTTGATCTTTCAAAGTCTCCTAAT
CGAGAGGCAATGTGGTATCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAGTTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
AGCCGGACATGGACTACAGCCTAGCAGCCTTGAAGCTTCTATGCCGGCAGCTCAAAGACGCCCGCGGAACTCCGTCTCACGCCACCGCCACTCTTAGCGGCATTCTCTTC
CAACGCGCCTGGCTTCAGGGGATCTTGGTCTCCGTCGACAAAGAAAATGGTAAATTGATTCTCGACGATGGCACCGGCACCGTCGAGCTCTCCCTCCCTCGCAACTTCCT
TCTCCGCCCTTGGAGCCTCGGGATGTACGTGATGGTTGTTGGCGCTTTTCTCTTCCGGACGAATGAACCGCCCTTTATTTCGGTCCACAAGATTGTTGATCTTTCAAAGT
CTCCTAATCGAGAGGCAATGTGGTATCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAGTTTTTGTAACTTGTTTTGTCGACCTAAAAGGTG
TTGATTATTTTATTTTCATGTTAATCCTGCTATGAAAAATGCATCAATTTCTTGTAATCCTACAAATGGGTTATGATGGTCTTTCGATCTTGTAAGATCACAACTCAAGT
AGAGAATCCGAG
Protein sequenceShow/hide protein sequence
MDYSLAALKLLCRQLKDARGTPSHATATLSGILFQRAWLQGILVSVDKENGKLILDDGTGTVELSLPRNFLLRPWSLGMYVMVVGAFLFRTNEPPFISVHKIVDLSKSPN
REAMWYLEVMEAYKMFYEPLVEEFL