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IVF0021996 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0021996
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionphosphopantothenoylcysteine decarboxylase subunit VHS3-like
Genome locationchr06:7497859..7498236
RNA-Seq ExpressionIVF0021996
SyntenyIVF0021996
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035630.1 prostatic spermine-binding protein-like [Cucumis melo var. makuwa]3.24e-1450.54Show/hide
Query:  DDSINYNHIEDED-DDSIEFNCIEDEKDD-DPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCN
        DD++++  IEDED DD + ++ IEDE +D DP  C +                IEDE++DDPL C  IEDED+DDPLDC+ IEDEDD+PL CN
Subjt:  DDSINYNHIEDED-DDSIEFNCIEDEKDD-DPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCN

TYK01566.1 hypothetical protein E5676_scaffold451G001440 [Cucumis melo var. makuwa]1.15e-2698.11Show/hide
Query:  MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM
        MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVL+
Subjt:  MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM

XP_008456992.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]6.44e-1456.12Show/hide
Query:  DDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM--------KMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLD
        DDDSI+ +HIED+DDD I ++  EDE DDD L CV+LKM MMIV +         +  D IEDE+ED P  C  IEDED DD L    IEDEDD+PLD
Subjt:  DDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM--------KMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLD

XP_008463661.1 PREDICTED: prostatic spermine-binding protein-like [Cucumis melo]2.04e-1350.54Show/hide
Query:  DDSINYNHIEDED-DDSIEFNCIEDEKDD-DPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCN
        DD++++  IEDED DD + ++ IEDE +D DP  C +                IEDE++DDPL C  IEDED+DDPLDC+ IEDEDD+PL CN
Subjt:  DDSINYNHIEDED-DDSIEFNCIEDEKDD-DPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCN

XP_016902073.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]1.19e-1653.27Show/hide
Query:  HIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNC-------------VSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDED
        H DDDSI+ NHIEDED D I+ NCIEDE DDDP++C              +LK+ MMI+L  +     EDE+EDDPL    IEDED+DDPL    IED+D
Subjt:  HIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNC-------------VSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDED

Query:  DNPLDCN
        D P D N
Subjt:  DNPLDCN

TrEMBL top hitse value%identityAlignment
A0A1S3CK92 prostatic spermine-binding protein-like6.0e-0942.95Show/hide
Query:  EKDDHI--------DDDSINYNHIEDEDDDSI--------------EFNCIEDEKD-DDPLNCVSL------------------KMNMMIVLM-------
        +KDD I        DDDSIN+N IEDEDDD I              + +C++++KD DDPL+C  +                  K + +  L        
Subjt:  EKDDHI--------DDDSINYNHIEDEDDDSI--------------EFNCIEDEKD-DDPLNCVSL------------------KMNMMIVLM-------

Query:  -KMMIDRIEDENED-DPLGCSRIEDEDKDDPLDCDDIEDED-DNPLDCN
          +  D IEDENED DP GC  IEDEDKDDPLDC  IEDED D+PLDCN
Subjt:  -KMMIDRIEDENED-DPLGCSRIEDEDKDDPLDCDDIEDED-DNPLDCN

A0A1S4E1H3 phosphopantothenoylcysteine decarboxylase subunit VHS3-like5.8e-1253.27Show/hide
Query:  HIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNC-------------VSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDED
        H DDDSI+ NHIEDED D I+ NCIEDE DDDP++C              +LK+ MMI+L  +     EDE+EDDPL    IEDED+DDPL    IED+D
Subjt:  HIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNC-------------VSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDED

Query:  DNPLDCN
        D P D N
Subjt:  DNPLDCN

A0A5A7SX67 Prostatic spermine-binding protein-like2.7e-0948.98Show/hide
Query:  DDHIDDDSINYNHIEDED-DDSIEFNCIEDEKDD-DPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCN
        +D   DD++++  IEDED DD + ++ IEDE +D DP  C                  IEDE++DDPL C  IEDED+DDPLDC+ IEDEDD+PL CN
Subjt:  DDHIDDDSINYNHIEDED-DDSIEFNCIEDEKDD-DPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCN

A0A5D3BTM0 Uncharacterized protein1.4e-1898.11Show/hide
Query:  MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM
        MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVL+
Subjt:  MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM

A0A5D3DQ88 Phosphopantothenoylcysteine decarboxylase subunit VHS3-like7.9e-0953.15Show/hide
Query:  EKDDHI-------DDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM--------KMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCD
        E DD I       DDDSI+ +HIED+DDD I ++  EDE DDD L CV+LKM MMIV +         +  D IEDE+E DP  C  IEDED DD L   
Subjt:  EKDDHI-------DDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM--------KMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCD

Query:  DIEDEDDNPLD
         IEDEDD+PLD
Subjt:  DIEDEDDNPLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGATGATCATATCGATGATGATTCTATCAACTACAACCACATTGAAGATGAAGATGATGATTCTATCGAATTCAATTGCATTGAAGATGAAAAAGATGATGA
TCCTCTCAACTGCGTCTCATTAAAGATGAATATGATGATCGTCTTGATGAAGATGATGATCGACCGCATTGAAGACGAAAATGAAGATGATCCTCTCGGCTGTAGCCGCA
TTGAAGACGAAGATAAAGATGATCCTCTCGACTGTGACGACATTGAAGACGAAGATGATAATCCTCTTGACTGTAACATATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGATGATCATATCGATGATGATTCTATCAACTACAACCACATTGAAGATGAAGATGATGATTCTATCGAATTCAATTGCATTGAAGATGAAAAAGATGATGA
TCCTCTCAACTGCGTCTCATTAAAGATGAATATGATGATCGTCTTGATGAAGATGATGATCGACCGCATTGAAGACGAAAATGAAGATGATCCTCTCGGCTGTAGCCGCA
TTGAAGACGAAGATAAAGATGATCCTCTCGACTGTGACGACATTGAAGACGAAGATGATAATCCTCTTGACTGTAACATATGGTAA
Protein sequenceShow/hide protein sequence
MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCNIW