; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022030 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022030
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:5525665..5526432
RNA-Seq ExpressionIVF0022030
SyntenyIVF0022030
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051227.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.26e-10388.33Show/hide
Query:  VLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYY---------------NSEAGPS
        VLNICNDNEQYIENIHYMYDV IVHAPIQRRRSLVQESDQLEEVDQH EEVPPVTQTQS+HGYVSPVMMM+AFETTYY               NSEAGPS
Subjt:  VLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYY---------------NSEAGPS

Query:  SSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH
        SSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYY+VPAAILEQLDEQQQQENQEEIQ+QRVQSRQPTRNRRRPGCGTH
Subjt:  SSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.62e-7970.15Show/hide
Query:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQ--SEHGYVSPVMMMRAFETTYY---------------NSE
        Q+VLNICNDNEQY+ENIHYMYDV IV AP+QRRR LVQE DQLEEVDQH EEVPP+TQTQ  SEH YVSPVMMM  F TTYY               NSE
Subjt:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQ--SEHGYVSPVMMMRAFETTYY---------------NSE

Query:  AGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAIL---------------EQLDEQQQQENQEEIQKQRVQSR--QPTRNRRRPGCGT
        AG SS++F QQY DLGSD SSSYMH HGRGRGEHNEYLYY+VPAA+                EQ DEQQQQENQEEIQ+QRVQSR  QP RNRRRPGCGT
Subjt:  AGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAIL---------------EQLDEQQQQENQEEIQKQRVQSR--QPTRNRRRPGCGT

Query:  H
        H
Subjt:  H

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.11e-7770.85Show/hide
Query:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYY---------------NSEAG
        Q+VLNICNDNEQY+ENIHYMYDV IV AP+QRRR LVQE DQLEEVDQH EEVPP+TQTQSEH YVSPVMMM  F TTYY               NSEAG
Subjt:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYY---------------NSEAG

Query:  PSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQL---------------DEQQQQENQEEIQKQRVQSR--QPTRNRRRPGCGTH
         SS++F QQY DLGSD SSSYMH HGRGRGEHNEYLYY+VPAA+ EQ                DEQQQQENQEEIQ+QRVQSR  QP RNRRRPGCGTH
Subjt:  PSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQL---------------DEQQQQENQEEIQKQRVQSR--QPTRNRRRPGCGTH

TYK18882.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.29e-9899.32Show/hide
Query:  MYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYYNSEAGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNE
        MYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYYNSEAGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNE
Subjt:  MYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYYNSEAGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNE

Query:  YLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH
        YLYY+VPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH
Subjt:  YLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.62e-7970.15Show/hide
Query:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQ--SEHGYVSPVMMMRAFETTYY---------------NSE
        Q+VLNICNDNEQY+ENIHYMYDV IV AP+QRRR LVQE DQLEEVDQH EEVPP+TQTQ  SEH YVSPVMMM  F TTYY               NSE
Subjt:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQ--SEHGYVSPVMMMRAFETTYY---------------NSE

Query:  AGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQL---------------DEQQQQENQEEIQKQRVQSR--QPTRNRRRPGCGT
        AG SS++F QQY DLGSD SSSYMH HGRGRGEHNEYLYY+VPAA+ EQ                DEQQQQENQEEIQ+QRVQSR  QP RNRRRPGCGT
Subjt:  AGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQL---------------DEQQQQENQEEIQKQRVQSR--QPTRNRRRPGCGT

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein9.4e-6370.3Show/hide
Query:  AKSQKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETT---------------YYNS
        A S  VLNICNDNEQY+ENIHYMYDV IV AP+QRRR LVQE DQLEEVDQH EEVPP+TQTQSEH YVSPVMMM  F TT               YYNS
Subjt:  AKSQKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETT---------------YYNS

Query:  EAGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILE---------------QLDEQQQQENQEEIQKQRVQS--RQPTRNRRRPGCG
        EAG SS++F QQY DLGSD SSSYMH HGRGRGEHNEYLYY+VPAA+ E               Q DEQQQQENQEEIQ+QRVQS  RQP RNRRRPGCG
Subjt:  EAGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILE---------------QLDEQQQQENQEEIQKQRVQS--RQPTRNRRRPGCG

Query:  TH
        TH
Subjt:  TH

A0A5A7U9Y2 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-7988.33Show/hide
Query:  VLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETT---------------YYNSEAGPS
        VLNICNDNEQYIENIHYMYDV IVHAPIQRRRSLVQESDQLEEVDQH EEVPPVTQTQS+HGYVSPVMMM+AFETT               YYNSEAGPS
Subjt:  VLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETT---------------YYNSEAGPS

Query:  SSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH
        SSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYY+VPAAILEQLDEQQQQENQEEIQ+QRVQSRQPTRNRRRPGCGTH
Subjt:  SSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein1.0e-6169.85Show/hide
Query:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETT---------------YYNSEAG
        Q+VLNICN+NEQY+ENIHYMYDV IV AP+QRRR LVQE DQLEEVDQH EEVPP+TQT+SEH YVSPVMMM  F TT               YYNSEAG
Subjt:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETT---------------YYNSEAG

Query:  PSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQLDE---------------QQQQENQEEIQKQRVQS--RQPTRNRRRPGCGTH
         SS++F QQY DLGSD SSSYMH HGRGRGEHNEYLYY+VPAA+ EQ DE               QQQQENQEEIQ+QRVQS  RQP RNRRRPGCGTH
Subjt:  PSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILEQLDE---------------QQQQENQEEIQKQRVQS--RQPTRNRRRPGCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.4e-6370.85Show/hide
Query:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETT---------------YYNSEAG
        Q+VLNICNDNEQY+ENIHYMYDV IV AP+QRRR LVQE DQLEEVDQH EEVPP+TQTQSEH YVSPVMMM  F TT               YYNSEAG
Subjt:  QKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETT---------------YYNSEAG

Query:  PSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILE---------------QLDEQQQQENQEEIQKQRVQS--RQPTRNRRRPGCGTH
         SS++F QQY DLGSD SSSYMH HGRGRGEHNEYLYY+VPAA+ E               Q DEQQQQENQEEIQ+QRVQS  RQP RNRRRPGCGTH
Subjt:  PSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYKVPAAILE---------------QLDEQQQQENQEEIQKQRVQS--RQPTRNRRRPGCGTH

A0A5D3D5S4 GATA zinc finger domain-containing protein 10-like isoform X21.1e-7499.32Show/hide
Query:  MYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYYNSEAGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNE
        MYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYYNSEAGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNE
Subjt:  MYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYYNSEAGPSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNE

Query:  YLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH
        YLYY+VPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH
Subjt:  YLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAATCGCAGAAGGTCCTAAATATATGCAACGATAACGAGCAATACATAGAGAACATTCACTATATGTACGATGTCTCTATTGTACATGCTCCAATTCAGAGGAG
ACGTTCTCTAGTGCAAGAGTCCGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCGGTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAGTAA
TGATGATGCGAGCATTTGAAACAACATATTATAATTCAGAGGCAGGTCCGTCATCATCAAACTTTAGGCAACAATACTGTGATTTAGGGAGCGATTCATCGTCTTCATAC
ATGCATTGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACAAAGTGCCTGCAGCGATACTCGAGCAATTAGATGAGCAACAACAACAAGAGAATCAGGA
GGAAATACAGAAACAAAGAGTTCAAAGTCGACAACCAACTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAATCGCAGAAGGTCCTAAATATATGCAACGATAACGAGCAATACATAGAGAACATTCACTATATGTACGATGTCTCTATTGTACATGCTCCAATTCAGAGGAG
ACGTTCTCTAGTGCAAGAGTCCGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAGTGCCTCCGGTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAGTAA
TGATGATGCGAGCATTTGAAACAACATATTATAATTCAGAGGCAGGTCCGTCATCATCAAACTTTAGGCAACAATACTGTGATTTAGGGAGCGATTCATCGTCTTCATAC
ATGCATTGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACAAAGTGCCTGCAGCGATACTCGAGCAATTAGATGAGCAACAACAACAAGAGAATCAGGA
GGAAATACAGAAACAAAGAGTTCAAAGTCGACAACCAACTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MAKSQKVLNICNDNEQYIENIHYMYDVSIVHAPIQRRRSLVQESDQLEEVDQHVEEVPPVTQTQSEHGYVSPVMMMRAFETTYYNSEAGPSSSNFRQQYCDLGSDSSSSY
MHCHGRGRGEHNEYLYYKVPAAILEQLDEQQQQENQEEIQKQRVQSRQPTRNRRRPGCGTH