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IVF0022035 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022035
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr02:15672061..15672551
RNA-Seq ExpressionIVF0022035
SyntenyIVF0022035
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032021.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.10e-6880.69Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLEDM  YPPGFTPQ+SSSP + DRTYPT     NPNTTTQQA H ++P
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ
        IST I EGGKKISEEQGSRRR+EFLEERLR IEGAD+ G     Q
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ

KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.94e-8593.1Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP MGD TYPTSFPAPNPNTTTQQAAHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ
        ISTPIMEG KKISEEQGSRRRLEFLEERLRVIEGAD+ G     Q
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]1.22e-7692.41Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP MGDRTYPTSFP PNPNTTTQQ AHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ
        IST IMEGGKKISEEQGSRRRLEFLEERLRVIEGAD+ G     Q
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]3.42e-7692.41Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMP YPPGFTPQRSSSP MGDRTYPTSFPAPNPNTTTQQAAHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ
        IST IMEGGKKISEEQGSRRRLEFLEERLRVIEGAD+ G     Q
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQ

XP_008452348.1 PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo]1.65e-7086.86Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLED+ AYPP FTPQR SSP M DRTYPTSFPAPNPNTTTQQAAH ++ 
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADI
        ISTPI + GKKISEEQGSR+RLEFLEERL  IEG D+
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADI

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase2.6e-5693.65Show/hide
Query:  QVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNPISTPIME
        Q   +RQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP MGDRTYPTSFPAPNPNTTTQQ AHANNPIST IME
Subjt:  QVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNPISTPIME

Query:  GGKKISEEQGSRRRLEFLEERLRVIE
        GGKKISEEQGSRRRLEFLEERLRVIE
Subjt:  GGKKISEEQGSRRRLEFLEERLRVIE

A0A5A7TXF2 Gag-pro-like protein7.9e-6696.4Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP MGD TYPTSFPAPNPNTTTQQAAHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG
        ISTPIMEG KKISEEQGSRRRLEFLEERLRVIEGAD+ G
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG

A0A5A7V1Y8 Gag-pro-like protein5.7e-5686.86Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLED+ AYPP FTPQR SSP M DRTYPTSFPAPNPNTTTQQAAH ++ 
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADI
        ISTPI + GKKISEEQGSR+RLEFLEERL  IEG D+
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADI

A0A5A7V681 Retrotrans_gag domain-containing protein2.3e-6595.68Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSP MGDRTYPTSFP PNPNTTTQQ AHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG
        IST IMEGGKKISEEQGSRRRLEFLEERLRVIEGAD+ G
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG

A0A5A7VAU5 Uncharacterized protein2.3e-6595.68Show/hide
Query:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP
        MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSV GTSSQVEVDLNQVLEDMP YPPGFTPQRSSSP MGDRTYPTSFPAPNPNTTTQQAAHANNP
Subjt:  MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNP

Query:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG
        IST IMEGGKKISEEQGSRRRLEFLEERLRVIEGAD+ G
Subjt:  ISTPIMEGGKKISEEQGSRRRLEFLEERLRVIEGADICG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGTCTGAAGGATCAATTGGCAAAAATCCTAGAATTGCTCACCACCGGAAGAGGAAAGAG
TGTTGCGGGGACTTCATCACAAGTGGAAGTGGATCTGAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGGTTTCACTCCTCAAAGGTCATCTAGTCCACACATGG
GGGATAGGACATATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCTCATGCGAACAATCCTATATCTACTCCAATTATGGAAGGTGGTAAG
AAAATTTCAGAAGAGCAGGGTAGTAGAAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATATGTGGTGATCCCTCCCAAATTCAAGACTC
TAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCAAACCAATGATCAGGTTCAAGCAGTTCGTCAAGACGTTGAAGGTCTGAAGGATCAATTGGCAAAAATCCTAGAATTGCTCACCACCGGAAGAGGAAAGAG
TGTTGCGGGGACTTCATCACAAGTGGAAGTGGATCTGAATCAGGTACTGGAGGACATGCCTGCATATCCTCCGGGTTTCACTCCTCAAAGGTCATCTAGTCCACACATGG
GGGATAGGACATATCCTACATCATTTCCCGCGCCAAATCCTAACACAACCACCCAACAAGCAGCTCATGCGAACAATCCTATATCTACTCCAATTATGGAAGGTGGTAAG
AAAATTTCAGAAGAGCAGGGTAGTAGAAGAAGACTGGAATTTCTAGAAGAAAGACTGCGCGTCATTGAAGGTGCAGACATATGTGGTGATCCCTCCCAAATTCAAGACTC
TAGATTTTGA
Protein sequenceShow/hide protein sequence
MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYPPGFTPQRSSSPHMGDRTYPTSFPAPNPNTTTQQAAHANNPISTPIMEGGK
KISEEQGSRRRLEFLEERLRVIEGADICGDPSQIQDSRF