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IVF0022047 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022047
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr06:23481340..23481588
RNA-Seq ExpressionIVF0022047
SyntenyIVF0022047
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.62e-4795.12Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRD D+ELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.47e-4798.78Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRF CYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.13e-51100Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

TYK05803.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.59e-4385.37Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLR KYDD IGRMERGAEKL Q+AR+ADQFSVQARTLRQGVIPTRDT++ELSHFLG+I Q L RFGCY+
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

TYK27025.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.72e-5198.78Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQF VQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like9.5e-3795.12Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRD D+ELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

A0A5A7SUT0 Reverse transcriptase8.9e-35100Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLG
        MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLG
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLG

A0A5A7TXA1 Glial fibrillary acidic protein-like1.3e-3898.78Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRF CYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

A0A5A7VDD9 Glial fibrillary acidic protein-like1.6e-39100Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

A0A5D3DUN1 Glial fibrillary acidic protein-like7.8e-3998.78Show/hide
Query:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
        MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQF VQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH
Subjt:  MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATAGATTTCATGATGTGGAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAGGACGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGC
AAGAGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCGATAAAGAATTGTCTCACTTTCTAGGAATCATAGGGCAGT
GCCTCGGACGTTTTGGGTGCTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGATAGATTTCATGATGTGGAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAGGACGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGC
AAGAGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCGATAAAGAATTGTCTCACTTTCTAGGAATCATAGGGCAGT
GCCTCGGACGTTTTGGGTGCTACCATTAG
Protein sequenceShow/hide protein sequence
MSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRFGCYH