; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022054 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022054
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionF-box/WD repeat-containing protein sel-10-like
Genome locationchr04:1203792..1204232
RNA-Seq ExpressionIVF0022054
SyntenyIVF0022054
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038617.1 F-box/WD repeat-containing protein sel-10-like [Cucumis melo var. makuwa]5.58e-7682.19Show/hide
Query:  MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH
        MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVK     
Subjt:  MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH

Query:  NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
                             MKKLYETSPVLSPSWVQKKLQPNYF
Subjt:  NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

XP_008466650.1 PREDICTED: F-box/WD repeat-containing protein sel-10-like [Cucumis melo]6.46e-101100Show/hide
Query:  MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH
        MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH
Subjt:  MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH

Query:  NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
        NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
Subjt:  NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

XP_022941463.1 protein JINGUBANG-like [Cucurbita moschata]4.71e-4661.38Show/hide
Query:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHN
        G   Q    G LCLAVVE L+LSGSEDTT+RIWR+EE G  HECLAVLD HRGPVRCLAG+LE      M+ M+ S LVYSGSLDQ+FKVW VKV L   
Subjt:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHN

Query:  NQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
                  +EE    DLKM KLYE SPVLSPSWV+KKLQ + +
Subjt:  NQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

XP_022981716.1 protein JINGUBANG-like [Cucurbita maxima]6.65e-4662.76Show/hide
Query:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHN
        G   Q    G LCLAVVE L+LSGSEDTT+RIWR+EE G  HECLAVLD HRGPVRCLAG+LE MEN     M+ S LVYSGSLDQ+FKVW VKV L   
Subjt:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHN

Query:  NQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
                  +EE    DLKM KLYE SPVLSPSWV+KKLQ + +
Subjt:  NQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

XP_038897273.1 protein JINGUBANG-like [Benincasa hispida]1.16e-7071.43Show/hide
Query:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLET----------------MENRVMNKMETSVLVYSGSL
        G   Q    G LCLAVVE L++SGSEDTT+RIWRREE GWSHECLAVLD HRGPVRCLAGTLET                MENR+MNKMET+VLVYSGSL
Subjt:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLET----------------MENRVMNKMETSVLVYSGSL

Query:  DQTFKVWGVKVFLNHNNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
        DQTFKVW VKV+L HN+Q +K L+EY+EEE +E+LKMKKLYE SPVLSPSWVQKKLQP YF
Subjt:  DQTFKVWGVKVFLNHNNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

TrEMBL top hitse value%identityAlignment
A0A1S3CRS7 F-box/WD repeat-containing protein sel-10-like2.0e-77100Show/hide
Query:  MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH
        MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH
Subjt:  MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH

Query:  NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
        NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
Subjt:  NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

A0A5A7TAM5 F-box/WD repeat-containing protein sel-10-like6.0e-5882.19Show/hide
Query:  MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH
        MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV      
Subjt:  MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNH

Query:  NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
                            KMKKLYETSPVLSPSWVQKKLQPNYF
Subjt:  NNQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

A0A6J1CLK4 protein JINGUBANG-like7.3e-3259.29Show/hide
Query:  LCLAVVE--SLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHNNQDKKVLME
        LCLAV E   L+LSGSEDTT+RIWR++E G+ HEC+ VL+ HRGPVRCLA T+E MEN V     +S LVYSGSLDQTFKVW VKV L   +   K+ ++
Subjt:  LCLAVVE--SLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHNNQDKKVLME

Query:  YQE---EEGEEDL-KMKKLYETSPVLSPSWVQKKLQPNYF
        Y E     G+     +  LY  SPVLSPSWVQKKLQ NYF
Subjt:  YQE---EEGEEDL-KMKKLYETSPVLSPSWVQKKLQPNYF

A0A6J1FS64 protein JINGUBANG-like3.4e-3761.38Show/hide
Query:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHN
        G   Q    G LCLAVVE L+LSGSEDTT+RIWR+EE G  HECLAVLD HRGPVRCLAG+LE      M+ M+ S LVYSGSLDQ+FKVW VKV L   
Subjt:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHN

Query:  NQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
                  +EE    DLKM KLYE SPVLSPSWV+KKLQ + +
Subjt:  NQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

A0A6J1IXB8 protein JINGUBANG-like4.4e-3761.38Show/hide
Query:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHN
        G   Q    G LCLAVVE L+LSGSEDTT+RIWR+EE G  HECLAVLD HRGPVRCLAG+LE      M  M+ S LVYSGSLDQ+FKVW VKV L   
Subjt:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHN

Query:  NQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF
                  +EE    DLKM KLYE SPVLSPSWV+KKLQ + +
Subjt:  NQDKKVLMEYQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF

SwissProt top hitse value%identityAlignment
C4Q0P6 Lissencephaly-1 homolog3.0e-0637.78Show/hide
Query:  SLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETME-NRVMNKMETSVLVYSGSLDQTFKVWGVK------VFLNHNN
        +LL S S D TIRIW  E    S EC  VL  H   V C+A        N + + M +S+L+ SGS D+T + W V       V + H+N
Subjt:  SLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETME-NRVMNKMETSVLVYSGSLDQTFKVWGVK------VFLNHNN

O48716 Protein JINGUBANG1.5e-1341.12Show/hide
Query:  LGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV-KVFLNHNNQDKKVL
        L  LCL V  SL+ SGS D TI +W+R+  G  H CL+VL  H GPV+CLA      +     + +   +VYSGSLD++ KVWGV + F++ N      +
Subjt:  LGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV-KVFLNHNNQDKKVL

Query:  MEYQEEE
        M+ Q+++
Subjt:  MEYQEEE

Q01277 Probable E3 ubiquitin ligase complex SCF subunit scon-24.3e-0536.59Show/hide
Query:  GFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVW
        G  CL + +++L +GS DTTI+IW  E    + EC+  L  H   +R L             + + S L+ SGSLD T KVW
Subjt:  GFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVW

Q09990 F-box/WD repeat-containing protein lin-237.4e-0534.12Show/hide
Query:  GFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVK
        G  CL   +  ++SG  D TI+IW R++    + C  +L  H G V CL       +NRV         + SGS D T +VW V+
Subjt:  GFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVK

Q93794 F-box/WD repeat-containing protein sel-105.6e-0531.07Show/hide
Query:  CLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWG------VKVFLNHNNQDKKV
        C+A+  S+L++GS DTT+R+W  E    S   LA L  H   VRC+                    V SG  D T K+W       ++    HNN+   +
Subjt:  CLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWG------VKVFLNHNNQDKKV

Query:  LME
        L E
Subjt:  LME

Arabidopsis top hitse value%identityAlignment
AT1G49450.1 Transducin/WD40 repeat-like superfamily protein6.8e-1446.67Show/hide
Query:  LGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENR-----VMNKMETSVLVYSGSLDQTFKVWGV
        +  LCLA   SLLLSG  D  I +W+R   G SH CL+VL  H GPV+CLA   E  E+         K +   +VYSGSLD + KVW V
Subjt:  LGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENR-----VMNKMETSVLVYSGSLDQTFKVWGV

AT2G26490.1 Transducin/WD40 repeat-like superfamily protein1.1e-1441.12Show/hide
Query:  LGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV-KVFLNHNNQDKKVL
        L  LCL V  SL+ SGS D TI +W+R+  G  H CL+VL  H GPV+CLA      +     + +   +VYSGSLD++ KVWGV + F++ N      +
Subjt:  LGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV-KVFLNHNNQDKKVL

Query:  MEYQEEE
        M+ Q+++
Subjt:  MEYQEEE

AT3G18950.1 Transducin/WD40 repeat-like superfamily protein3.1e-1445.16Show/hide
Query:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV
        G + +   L  LCLA   SL+LSG  D  I +WRR   G SH CL+VL  H GPV+CL    +  E     K +   +VYSGSLD++ KVW V
Subjt:  GDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV

AT3G50390.1 Transducin/WD40 repeat-like superfamily protein3.6e-1548.24Show/hide
Query:  LGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV
        L  LCL    +L+ SGS D  IR+WRR E G  H CL+VL  H GPV+CLA  +E  +  V    E   +VYSGSLD++ K+W V
Subjt:  LGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGV

AT4G34380.1 Transducin/WD40 repeat-like superfamily protein3.1e-1444.19Show/hide
Query:  LCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETM----ENRVMNKMETSVLVYSGSLDQTFKVWGV
        LCL +  +LLLSGS D  I +WRR+ +  SH+CL+VL  H GPV+CLA   E          + + +   ++YSGSLD++ KVW V
Subjt:  LCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETM----ENRVMNKMETSVLVYSGSLDQTFKVWGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATTCCTCCCAGGCCACTGGTTTGGGGTTTCTGTGTCTGGCGGTGGTGGAGAGCCTGCTGCTCAGTGGCTCTGAGGACACCACCATCAGGATTTGGAGGAGGGA
GGAAGCAGGTTGGTCCCATGAATGCTTGGCAGTGTTGGATAGCCATAGAGGGCCTGTCAGATGCTTGGCAGGGACCTTGGAAACCATGGAAAACAGAGTAATGAACAAGA
TGGAGACCAGTGTTTTGGTTTATAGTGGGAGTTTGGATCAGACGTTTAAGGTTTGGGGAGTGAAGGTTTTTTTGAACCATAATAATCAAGACAAAAAGGTATTAATGGAG
TATCAGGAGGAGGAGGGGGAGGAGGACTTGAAGATGAAGAAGCTTTATGAAACGAGCCCTGTCTTGTCTCCTTCTTGGGTTCAGAAAAAGCTTCAACCTAATTATTTCTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATTCCTCCCAGGCCACTGGTTTGGGGTTTCTGTGTCTGGCGGTGGTGGAGAGCCTGCTGCTCAGTGGCTCTGAGGACACCACCATCAGGATTTGGAGGAGGGA
GGAAGCAGGTTGGTCCCATGAATGCTTGGCAGTGTTGGATAGCCATAGAGGGCCTGTCAGATGCTTGGCAGGGACCTTGGAAACCATGGAAAACAGAGTAATGAACAAGA
TGGAGACCAGTGTTTTGGTTTATAGTGGGAGTTTGGATCAGACGTTTAAGGTTTGGGGAGTGAAGGTTTTTTTGAACCATAATAATCAAGACAAAAAGGTATTAATGGAG
TATCAGGAGGAGGAGGGGGAGGAGGACTTGAAGATGAAGAAGCTTTATGAAACGAGCCCTGTCTTGTCTCCTTCTTGGGTTCAGAAAAAGCTTCAACCTAATTATTTCTG
A
Protein sequenceShow/hide protein sequence
MGDSSQATGLGFLCLAVVESLLLSGSEDTTIRIWRREEAGWSHECLAVLDSHRGPVRCLAGTLETMENRVMNKMETSVLVYSGSLDQTFKVWGVKVFLNHNNQDKKVLME
YQEEEGEEDLKMKKLYETSPVLSPSWVQKKLQPNYF