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IVF0022108 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022108
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBeta-amylase
Genome locationchr09:13306720..13306953
RNA-Seq ExpressionIVF0022108
SyntenyIVF0022108
Gene Ontology termsGO:0000272 - polysaccharide catabolic process (biological process)
GO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0006508 - proteolysis (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0016161 - beta-amylase activity (molecular function)
GO:0102229 - amylopectin maltohydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK26663.1 peptidyl-prolyl cis-trans isomerase CYP21-1 [Cucumis melo var. makuwa]3.67e-3994.59Show/hide
Query:  MLQSSPRSTTTRNFVTSRRKPQAFKCEYESILLCEPYASCTSISIQVDFLFPPSCTHLPSSSPSHVCQPLATQV
        MLQSSP STTTRNFVTSRRKPQAFKCEYESILLCEPYAS TSISIQVDFLFPPSCTHLPS SPSHVCQPLATQ+
Subjt:  MLQSSPRSTTTRNFVTSRRKPQAFKCEYESILLCEPYASCTSISIQVDFLFPPSCTHLPSSSPSHVCQPLATQV
TrEMBL top hitse value%identityAlignment
A0A5D3DSU7 Beta-amylase7.3e-3194.59Show/hide
Query:  MLQSSPRSTTTRNFVTSRRKPQAFKCEYESILLCEPYASCTSISIQVDFLFPPSCTHLPSSSPSHVCQPLATQV
        MLQSSP STTTRNFVTSRRKPQAFKCEYESILLCEPYAS TSISIQVDFLFPPSCTHLPS SPSHVCQPLATQ+
Subjt:  MLQSSPRSTTTRNFVTSRRKPQAFKCEYESILLCEPYASCTSISIQVDFLFPPSCTHLPSSSPSHVCQPLATQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCAGTCGTCTCCACGATCGACCACCACACGAAACTTTGTCACAAGTCGTCGCAAGCCTCAAGCATTCAAGTGTGAGTATGAGTCGATCCTCCTTTGTGAGCCGTA
CGCAAGCTGCACATCCATTTCCATCCAAGTCGATTTCCTCTTTCCGCCGAGCTGTACACATCTGCCTTCTTCCTCACCGAGCCACGTGTGCCAGCCTCTAGCTACCCAAG
TCGATTCCCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCCAGTCGTCTCCACGATCGACCACCACACGAAACTTTGTCACAAGTCGTCGCAAGCCTCAAGCATTCAAGTGTGAGTATGAGTCGATCCTCCTTTGTGAGCCGTA
CGCAAGCTGCACATCCATTTCCATCCAAGTCGATTTCCTCTTTCCGCCGAGCTGTACACATCTGCCTTCTTCCTCACCGAGCCACGTGTGCCAGCCTCTAGCTACCCAAG
TCGATTCCCTTTAG
Protein sequenceShow/hide protein sequence
MLQSSPRSTTTRNFVTSRRKPQAFKCEYESILLCEPYASCTSISIQVDFLFPPSCTHLPSSSPSHVCQPLATQVDSL