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IVF0022112 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022112
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLysM domain-containing protein
Genome locationchr11:30742119..30742415
RNA-Seq ExpressionIVF0022112
SyntenyIVF0022112
Gene Ontology termsNA
InterPro domainsIPR018392 - LysM domain
IPR036779 - LysM domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040027.1 hypothetical protein E6C27_scaffold122G003130 [Cucumis melo var. makuwa]5.37e-50100Show/hide
Query:  MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
        MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
Subjt:  MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
KAG6574776.1 hypothetical protein SDJN03_25415, partial [Cucurbita argyrosperma subsp. sororia]7.97e-2876.62Show/hide
Query:  SVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLL
        SVFI +MAL M++ASA+S PC+DIY+V+EGE+LH+ISAKC DPFIVD NP IQDSDDVFPGLLI+ITP+L NSRKLL
Subjt:  SVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLL
KAG7013356.1 hypothetical protein SDJN02_23520, partial [Cucurbita argyrosperma subsp. argyrosperma]5.10e-2876.62Show/hide
Query:  SVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLL
        SVFI  MAL M++ASA+S PC+DIY+V+EGE+LH+ISAKC DPFIVD NP IQDSDDVFPGLLI+ITP+L NSRKLL
Subjt:  SVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLL
KGN46208.1 hypothetical protein Csa_005039 [Cucumis sativus]6.06e-4793.98Show/hide
Query:  MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
        MASYFSVF+TVMALI+VVASAES+PC+DIYVVKEGETLHTISAKC DPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
Subjt:  MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
XP_023006696.1 uncharacterized protein LOC111499354 [Cucurbita maxima]1.42e-2774.68Show/hide
Query:  SYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKL
        S +SVFI  MAL M++ASA+S PC+DIY+V+EGE+LH+ISAKC DPFIVD NP IQDSDDVFPGLLI+ITP+L NSRKL
Subjt:  SYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKL
TrEMBL top hitse value%identityAlignment
A0A0A0K9P3 LysM domain-containing protein6.9e-3593.98Show/hide
Query:  MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
        MASYFSVF+TVMALI+VVASAES+PC+DIYVVKEGETLHTISAKC DPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
Subjt:  MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
A0A3N7FCK6 LysM domain-containing protein6.5e-1772.88Show/hide
Query:  ESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRK
        E KPC++IYVV+EGETLHTIS KCRDP+IV+ NPHI D DDVFPGL+I+ITP   N RK
Subjt:  ESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRK
A0A5D3DLK6 Uncharacterized protein3.3e-37100Show/hide
Query:  MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
        MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
Subjt:  MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL
A0A6J1H7L7 uncharacterized protein LOC1114603132.1e-2076.62Show/hide
Query:  SVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLL
        SVFI  MAL M++ASA+S PC+DIY+V+EGE+LH+ISAKC DPFIVD NP IQDSDDVFPGLLI+ITP+L NSRKLL
Subjt:  SVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLL
A0A6J1KYG6 uncharacterized protein LOC1114993541.6e-2074.68Show/hide
Query:  SYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKL
        S +SVFI  MAL M++ASA+S PC+DIY+V+EGE+LH+ISAKC DPFIVD NP IQDSDDVFPGLLI+ITP+L NSRKL
Subjt:  SYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52790.1 peptidoglycan-binding LysM domain-containing protein8.3e-1761.29Show/hide
Query:  IMVVASAESKP-CNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTL
        +M+   +  +P C++IY VKEGETL TIS KC DP+IV+ NPHI D DD+FPGLLI+ITP+L
Subjt:  IMVVASAESKP-CNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTL
AT4G25433.1 peptidoglycan-binding LysM domain-containing protein1.2e-1568.75Show/hide
Query:  KPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQI
        +PC ++YVV EG+TLH+IS KC DPFIV+ NPHI D DDVFPGLLI++
Subjt:  KPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQI
AT5G62150.1 peptidoglycan-binding LysM domain-containing protein1.3e-1766.1Show/hide
Query:  SKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKL
        +KPC +IY+V EGETLHTI  KC DPFIV+ NPHI D DDVFPGL+++I P   N RKL
Subjt:  SKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTACTTCTCTGTTTTCATAACTGTGATGGCGCTGATCATGGTGGTGGCCTCTGCAGAATCCAAGCCTTGCAACGACATCTATGTTGTCAAAGAAGGGGAGAC
GTTGCACACAATCAGCGCCAAGTGCAGGGATCCCTTCATTGTTGACAACAATCCCCACATTCAAGACTCCGATGATGTTTTCCCAGGACTCCTCATCCAAATTACCCCTA
CCCTCATCAACTCCAGGAAGTTGCTTCTGTAA
mRNA sequenceShow/hide mRNA sequence
GTGAACTACTGATATATCTCTGGTGTCTCCCATGGCTTCCTACTTCTCTGTTTTCATAACTGTGATGGCGCTGATCATGGTGGTGGCCTCTGCAGAATCCAAGCCTTGCA
ACGACATCTATGTTGTCAAAGAAGGGGAGACGTTGCACACAATCAGCGCCAAGTGCAGGGATCCCTTCATTGTTGACAACAATCCCCACATTCAAGACTCCGATGATGTT
TTCCCAGGACTCCTCATCCAAATTACCCCTACCCTCATCAACTCCAGGAAGTTGCTTCTGTAAATTCATTCATTCAC
Protein sequenceShow/hide protein sequence
MASYFSVFITVMALIMVVASAESKPCNDIYVVKEGETLHTISAKCRDPFIVDNNPHIQDSDDVFPGLLIQITPTLINSRKLLL