; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0022144 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022144
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionB3 domain-containing transcription factor VRN1-like
Genome locationchr11:3503135..3504482
RNA-Seq ExpressionIVF0022144
SyntenyIVF0022144
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148065.1 B3 domain-containing transcription factor VRN1 isoform X2 [Cucumis sativus]7.59e-23087.47Show/hide
Query:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI
        MG F SPNPHFFKI+LHQNLTQQKLDLPNKFVKNN  SLLFN+  LSLPDG+KWNFQL +LDGK CFLRGWPEFV FY++QPGYFLVFQLKGICCFNVLI
Subjt:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP
        FDTSATEIDYPMRR PV++PKSES+DE ESI ILHE  LKKR+RMEKKEKETSAY SLR+MKKNM+IKIMK REFTTPQ FSD+DEDED    LET+YSP
Subjt:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP

Query:  RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW
        RQTNYR S YNE EDGRSSPESMRPMNPRK  QVLTENQLVV+RRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKES+DVKLEVGDGRIW
Subjt:  RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW

Query:  KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP
        KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFEL+NKTPKVHF VTIFRLP+P
Subjt:  KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP

XP_008457851.1 PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]4.17e-267100Show/hide
Query:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI
        MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI
Subjt:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP
        FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP
Subjt:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP

Query:  RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW
        RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW
Subjt:  RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW

Query:  KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ
        KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ
Subjt:  KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ

XP_011649360.1 B3 domain-containing transcription factor VRN1 isoform X1 [Cucumis sativus]8.62e-22481.56Show/hide
Query:  MGSFISPNPHFFKIILHQNLTQQKL--------------------------DLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEF
        MG F SPNPHFFKI+LHQNLTQQKL                          DLPNKFVKNN  SLLFN+  LSLPDG+KWNFQL +LDGK CFLRGWPEF
Subjt:  MGSFISPNPHFFKIILHQNLTQQKL--------------------------DLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEF

Query:  VKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHRE
        V FY++QPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRR PV++PKSES+DE ESI ILHE  LKKR+RMEKKEKETSAY SLR+MKKNM+IKIMK RE
Subjt:  VKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHRE

Query:  FTTPQVFSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLS
        FTTPQ FSD+DEDED    LET+YSPRQTNYR S YNE EDGRSSPESMRPMNPRK  QVLTENQLVV+RRASSFKCRTKNPSFMVTMRPSYIQTGNCLS
Subjt:  FTTPQVFSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLS

Query:  LPRIFSERYIKESMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP
        LPRIFSERYIKES+DVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFEL+NKTPKVHF VTIFRLP+P
Subjt:  LPRIFSERYIKESMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP

XP_038902136.1 B3 domain-containing transcription factor VRN1-like isoform X1 [Benincasa hispida]2.44e-19774.23Show/hide
Query:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI
        M  F SPNPHFFKIILHQNL QQKLDLPNKFVKNNG SLLF+   LSLPDGA W  QL  LDGK CFLRGWPEFV+FYSIQPGYFLVFQL+ ICCFNVLI
Subjt:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKK----NMEIKIMKHREFTTPQVFSDEDEDEDEDEDLET
        FDTSATEIDYP R P VLIPK+E+ED EES+  L+ A LKKR R  +KE++T AYCS R+MKK    N++IKI KHR FTT Q FS EDEDEDED  LET
Subjt:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKK----NMEIKIMKHREFTTPQVFSDEDEDEDEDEDLET

Query:  NYSPRQTNYRGS----------------------------AYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQ
        NYS RQ+ YRGS                            AYNE +DGR SPE+MRPMNPRK P VLTENQLVVLRRA SFKCRT NPSFMVTMRPSYIQ
Subjt:  NYSPRQTNYRGS----------------------------AYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQ

Query:  TGNCLSLPRIFSERYIKESMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ
        TGN LS+PRIF+ERYIKESMDVKLE+GDGR W+V CGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKT KVHFHVTIFRLP+P+
Subjt:  TGNCLSLPRIFSERYIKESMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ

XP_038902137.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispida]1.02e-20379.95Show/hide
Query:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI
        M  F SPNPHFFKIILHQNL QQKLDLPNKFVKNNG SLLF+   LSLPDGA W  QL  LDGK CFLRGWPEFV+FYSIQPGYFLVFQL+ ICCFNVLI
Subjt:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKK----NMEIKIMKHREFTTPQVFSDEDEDEDEDEDLET
        FDTSATEIDYP R P VLIPK+E+ED EES+  L+ A LKKR R  +KE++T AYCS R+MKK    N++IKI KHR FTT Q FS EDEDEDED  LET
Subjt:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKK----NMEIKIMKHREFTTPQVFSDEDEDEDEDEDLET

Query:  NYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGD
        NYS RQ+ YRGSAYNE +DGR SPE+MRPMNPRK P VLTENQLVVLRRA SFKCRT NPSFMVTMRPSYIQTGN LS+PRIF+ERYIKESMDVKLE+GD
Subjt:  NYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGD

Query:  GRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ
        GR W+V CGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKT KVHFHVTIFRLP+P+
Subjt:  GRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ

TrEMBL top hitse value%identityAlignment
A0A0A0LM04 Uncharacterized protein1.8e-18087.47Show/hide
Query:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI
        MG F SPNPHFFKI+LHQNLTQQKLDLPNKFVKNN  SLLFN+  LSLPDG+KWNFQL +LDGK CFLRGWPEFV FY++QPGYFLVFQLKGICCFNVLI
Subjt:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP
        FDTSATEIDYPMRR PV++PKSES+DE ESI ILHE  LKKR+RMEKKEKETSAY SLR+MKKNM+IKIMK REFTTPQ FS    D+DEDEDLET+YSP
Subjt:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP

Query:  RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW
        RQTNYR S YNE EDGRSSPESMRPMNPRK  QVLTENQLVV+RRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKES+DVKLEVGDGRIW
Subjt:  RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW

Query:  KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP
        KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFEL+NKTPKVHF VTIFRLP+P
Subjt:  KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP

A0A0A0LMR6 Uncharacterized protein3.1e-14073.13Show/hide
Query:  FISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDT
        F SPNPHFFK+ILHQ LTQQKLDLPNKFVKNNG SLLFN V L LPDGA W  QL KLDGK CF RGWPEFV+FYS+QPG+FLVFQLKGICCFNVLIFDT
Subjt:  FISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDT

Query:  SATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLR----KMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYS
        SATEIDYP+RR   LIPKS +EDEEESI IL+E  LKKR RMEK+E+   AY SLR     M+KN ++KI K+R  T     SDEDE      DLE + S
Subjt:  SATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLR----KMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYS

Query:  PRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRI
         RQ+N+RG  YNE +DGR SPESMRPMNPRK P  LTENQL V +RAS FK R  NPSFMVTMRPSYIQTGN LSLPR F E+YIKES+DVKLEVGDGR 
Subjt:  PRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRI

Query:  WKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ
        W+VWCGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFEL+ K   V F V IFRLP+ +
Subjt:  WKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ

A0A1S3C614 B3 domain-containing transcription factor VRN1-like9.1e-209100Show/hide
Query:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI
        MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI
Subjt:  MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLI

Query:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP
        FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP
Subjt:  FDTSATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSP

Query:  RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW
        RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW
Subjt:  RQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW

Query:  KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ
        KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ
Subjt:  KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNPQ

A0A1S3C6V0 B3 domain-containing transcription factor VRN1-like3.1e-14074.09Show/hide
Query:  FISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDT
        F SPNPHFFK+ILHQ LTQQKL+LPNKFVKNNG S+LFN V L LPDGA W  QL K DGK  F RGWPEFV+FYS+QPGYFLVFQLKGICCFNVLIFDT
Subjt:  FISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDT

Query:  SATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLR----KMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYS
        SATEIDYP+R    +IPKS +EDEEESI IL+E  LKKR RME KE+ET AY SLR     M+KN ++KI K+R  T     SDEDE     EDLET+ S
Subjt:  SATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLR----KMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYS

Query:  PRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRI
         RQ+N+RG+AYNE +DGR SPESMRPMNPRK P  LTENQL V +RAS FK R  NPSFMVTMRPSYIQTGN LSLPR F ERYIKES+DVKLEVGDGR 
Subjt:  PRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRI

Query:  WKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPN
        W+VWCGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFEL+ K   V F V IFRLPN
Subjt:  WKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPN

A0A5A7TS22 B3 domain-containing transcription factor VRN1-like3.1e-14074.09Show/hide
Query:  FISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDT
        F SPNPHFFK+ILHQ LTQQKL+LPNKFVKNNG S+LFN V L LPDGA W  QL K DGK  F RGWPEFV+FYS+QPGYFLVFQLKGICCFNVLIFDT
Subjt:  FISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDT

Query:  SATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLR----KMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYS
        SATEIDYP+R    +IPKS +EDEEESI IL+E  LKKR RME KE+ET AY SLR     M+KN ++KI K+R  T     SDEDE     EDLET+ S
Subjt:  SATEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLR----KMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYS

Query:  PRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRI
         RQ+N+RG+AYNE +DGR SPESMRPMNPRK P  LTENQL V +RAS FK R  NPSFMVTMRPSYIQTGN LSLPR F ERYIKES+DVKLEVGDGR 
Subjt:  PRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRI

Query:  WKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPN
        W+VWCGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFEL+ K   V F V IFRLPN
Subjt:  WKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPN

SwissProt top hitse value%identityAlignment
Q2R9D2 B3 domain-containing protein Os11g01976004.0e-1226.98Show/hide
Query:  FFKIILH-QNLTQQKLDLP-NKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEI
        FF+++L  Q+L + K+    N+ ++N    +    V+L    G KW+ +L      F F+ GW EFV+  SIQ G FLVF       F+V +F+ S  + 
Subjt:  FFKIILH-QNLTQQKLDLP-NKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEI

Query:  DYPMRRPP---VLIPKSESEDEEESIHILHE---AALKKRKRMEKKEKETSAYCSLRKM---KKNMEIKIMK------------HREFTTPQVFSDEDED
               P   V+I     E    +  I  E    ALK+   +  K      Y    ++   KK+ E  + +              + T+    S     
Subjt:  DYPMRRPP---VLIPKSESEDEEESIHILHE---AALKKRKRMEKKEKETSAYCSLRKM---KKNMEIKIMK------------HREFTTPQVFSDEDED

Query:  EDEDEDLETNYSPRQTNYRGSAYNE-SEDGRSSPESMRPMNPRKAPQVLTENQL-VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIK
           DED  ++ SP           E S  GR   +  R +      + +TE +    L+RA  FK  +KNP  +  M  SY+  G  +++P  F    + 
Subjt:  EDEDEDLETNYSPRQTNYRGSAYNE-SEDGRSSPESMRPMNPRKAPQVLTENQL-VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIK

Query:  E-SMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINK-TPKVHFH
          +  + L    G+ W+V     +   R      GGW +FAV N LE+ D+CVFEL+ K   KVH +
Subjt:  E-SMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINK-TPKVHFH

Q84R27 B3 domain-containing protein At3g189609.9e-1128.11Show/hide
Query:  SPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSA
        SP   FFK++L   +  + + +P +FVK  G S L   V L  P G K + +L ++  +  F  GW EF + +SI+ G+FL+F+ K    F V+IF+ SA
Subjt:  SPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSA

Query:  TEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEI-KIMKHREFTTP-QVFSDEDEDE
         E  YP+    ++    +  D      +  +   K  + +   + E  +    +K  +++E+ KI+   +   P  V  +E+ED+
Subjt:  TEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEI-KIMKHREFTTP-QVFSDEDEDE

Q8L3W1 B3 domain-containing transcription factor VRN12.4e-2529.36Show/hide
Query:  PNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSAT
        P P F K+I    + +++L +P+KFV    D L    VAL++PDG  W   L K D K  F  GW EFV  YSI+ GY L+F+ +G   F+V IF+ S +
Subjt:  PNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSAT

Query:  EIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETS--AYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSPRQTN
        EI+Y             S    +S H       K+ +  E  E E +   + S        E  +  ++ + +  + +        +E   T   P++  
Subjt:  EIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETS--AYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSPRQTN

Query:  YRGSAYNESEDGRSSPESMRPMNPRKAPQ--------VLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKE-SMDVKLEVG
         +    +  E   S+P    P N  K  +        V  E +   +  A +F+    NP F V +RPSY+  G  + LP  F+E+Y+   S  +K+++ 
Subjt:  YRGSAYNESEDGRSSPESMRPMNPRKAPQ--------VLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKE-SMDVKLEVG

Query:  DGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRL
        +    K W  VR  +   R +   GW  F ++N L EGD+CVFEL+ +T      VT FR+
Subjt:  DGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRL

Q9XIB4 B3 domain-containing protein At1g494751.1e-1231.72Show/hide
Query:  FFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDY
        F KIIL   + ++ + +P +FV+      L ++V L  P G K + ++ ++  +  F +GW EF + +S+  G+FL F  +G  CF V+IFD SA+EI+Y
Subjt:  FFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDY

Query:  PM-----RRPPVL------IPKSESEDEEESIHILHEAALKKRKR
        P+      R  V+          ES D++  +  + E   KK+K+
Subjt:  PM-----RRPPVL------IPKSESEDEEESIHILHEAALKKRKR

Q9ZSH7 B3 domain-containing protein At4g015806.2e-1337.38Show/hide
Query:  SPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSA
        SP   FFK++L   +  + + +P +FVK  G S L   V L  P G K + +L ++  +  F  GW EF + +SI+ G+FL+F+ K    F V+IF+ SA
Subjt:  SPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSA

Query:  TEIDYPM
         E +YP+
Subjt:  TEIDYPM

Arabidopsis top hitse value%identityAlignment
AT1G49475.1 AP2/B3-like transcriptional factor family protein7.6e-1431.72Show/hide
Query:  FFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDY
        F KIIL   + ++ + +P +FV+      L ++V L  P G K + ++ ++  +  F +GW EF + +S+  G+FL F  +G  CF V+IFD SA+EI+Y
Subjt:  FFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDY

Query:  PM-----RRPPVL------IPKSESEDEEESIHILHEAALKKRKR
        P+      R  V+          ES D++  +  + E   KK+K+
Subjt:  PM-----RRPPVL------IPKSESEDEEESIHILHEAALKKRKR

AT1G49480.1 related to vernalization1 11.0e-1031.38Show/hide
Query:  TTPQVFSDEDEDEDEDEDL------ETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQT
        T  Q F  E + E+  + L      + N +P + N      ++SE+     ES    + RK      E +  V   A +F+    NP F V +RPSY+  
Subjt:  TTPQVFSDEDEDEDEDEDL------ETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQT

Query:  GNCLSLPRIFSERYIKE-SMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRL
        G  + LP  F+E+Y+   S  +KL++G+    K W  VR  +   R +   GW  F ++N + EGD+CVFEL+ +T      VT FR+
Subjt:  GNCLSLPRIFSERYIKE-SMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRL

AT3G18960.1 AP2/B3-like transcriptional factor family protein7.1e-1228.11Show/hide
Query:  SPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSA
        SP   FFK++L   +  + + +P +FVK  G S L   V L  P G K + +L ++  +  F  GW EF + +SI+ G+FL+F+ K    F V+IF+ SA
Subjt:  SPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSA

Query:  TEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEI-KIMKHREFTTP-QVFSDEDEDE
         E  YP+    ++    +  D      +  +   K  + +   + E  +    +K  +++E+ KI+   +   P  V  +E+ED+
Subjt:  TEIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEI-KIMKHREFTTP-QVFSDEDEDE

AT3G18990.1 AP2/B3-like transcriptional factor family protein1.7e-2629.36Show/hide
Query:  PNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSAT
        P P F K+I    + +++L +P+KFV    D L    VAL++PDG  W   L K D K  F  GW EFV  YSI+ GY L+F+ +G   F+V IF+ S +
Subjt:  PNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSAT

Query:  EIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETS--AYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSPRQTN
        EI+Y             S    +S H       K+ +  E  E E +   + S        E  +  ++ + +  + +        +E   T   P++  
Subjt:  EIDYPMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETS--AYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSPRQTN

Query:  YRGSAYNESEDGRSSPESMRPMNPRKAPQ--------VLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKE-SMDVKLEVG
         +    +  E   S+P    P N  K  +        V  E +   +  A +F+    NP F V +RPSY+  G  + LP  F+E+Y+   S  +K+++ 
Subjt:  YRGSAYNESEDGRSSPESMRPMNPRKAPQ--------VLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKE-SMDVKLEVG

Query:  DGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRL
        +    K W  VR  +   R +   GW  F ++N L EGD+CVFEL+ +T      VT FR+
Subjt:  DGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRL

AT4G01580.1 AP2/B3-like transcriptional factor family protein4.4e-1437.38Show/hide
Query:  SPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSA
        SP   FFK++L   +  + + +P +FVK  G S L   V L  P G K + +L ++  +  F  GW EF + +SI+ G+FL+F+ K    F V+IF+ SA
Subjt:  SPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSA

Query:  TEIDYPM
         E +YP+
Subjt:  TEIDYPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCGTTCATTTCCCCAAATCCCCATTTCTTCAAGATCATTCTTCATCAAAATCTCACCCAACAAAAACTCGATCTTCCAAACAAGTTCGTCAAGAACAATGGCGA
TTCCCTGTTATTCAACCACGTCGCTCTTTCCCTTCCCGACGGCGCTAAATGGAACTTCCAACTCATGAAACTAGACGGAAAGTTCTGTTTCCTCAGAGGATGGCCGGAGT
TTGTAAAGTTTTATTCCATTCAACCTGGATATTTCCTCGTGTTCCAGTTGAAAGGAATTTGTTGTTTCAATGTTCTTATTTTCGATACTTCCGCTACCGAAATCGATTAT
CCAATGCGTCGACCGCCGGTACTCATTCCCAAAAGCGAAAGCGAAGATGAAGAAGAATCTATCCATATACTACATGAGGCGGCTTTAAAGAAAAGAAAAAGAATGGAGAA
GAAAGAGAAAGAAACATCCGCCTATTGCTCGTTGCGGAAGATGAAGAAGAATATGGAGATAAAGATAATGAAACATCGAGAATTCACTACACCTCAAGTATTCAGCGATG
AAGATGAAGATGAAGATGAAGATGAAGATCTAGAAACAAATTACTCACCTAGACAAACTAATTACAGAGGATCAGCTTACAACGAGAGCGAAGACGGCAGATCCAGTCCG
GAATCAATGAGACCGATGAATCCACGGAAGGCGCCGCAGGTATTGACGGAGAATCAATTGGTAGTCCTGAGGAGAGCGAGTTCATTCAAATGTAGAACAAAGAATCCTTC
ATTCATGGTGACAATGAGGCCTTCCTACATCCAAACAGGAAATTGTCTGAGCTTGCCAAGGATCTTTTCGGAGAGATATATAAAGGAATCGATGGACGTGAAGCTGGAGG
TGGGAGATGGGCGGATTTGGAAAGTGTGGTGCGGGGTGCGGTGGGCGTTTACACGGCGGCGAACGGAGTTGAAAGGCGGTTGGAAGAGATTCGCCGTTGATAATGAGTTG
GAAGAAGGGGATATTTGTGTGTTTGAATTAATTAACAAAACCCCTAAAGTCCATTTCCACGTCACCATTTTCCGTCTTCCAAATCCTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCGTTCATTTCCCCAAATCCCCATTTCTTCAAGATCATTCTTCATCAAAATCTCACCCAACAAAAACTCGATCTTCCAAACAAGTTCGTCAAGAACAATGGCGA
TTCCCTGTTATTCAACCACGTCGCTCTTTCCCTTCCCGACGGCGCTAAATGGAACTTCCAACTCATGAAACTAGACGGAAAGTTCTGTTTCCTCAGAGGATGGCCGGAGT
TTGTAAAGTTTTATTCCATTCAACCTGGATATTTCCTCGTGTTCCAGTTGAAAGGAATTTGTTGTTTCAATGTTCTTATTTTCGATACTTCCGCTACCGAAATCGATTAT
CCAATGCGTCGACCGCCGGTACTCATTCCCAAAAGCGAAAGCGAAGATGAAGAAGAATCTATCCATATACTACATGAGGCGGCTTTAAAGAAAAGAAAAAGAATGGAGAA
GAAAGAGAAAGAAACATCCGCCTATTGCTCGTTGCGGAAGATGAAGAAGAATATGGAGATAAAGATAATGAAACATCGAGAATTCACTACACCTCAAGTATTCAGCGATG
AAGATGAAGATGAAGATGAAGATGAAGATCTAGAAACAAATTACTCACCTAGACAAACTAATTACAGAGGATCAGCTTACAACGAGAGCGAAGACGGCAGATCCAGTCCG
GAATCAATGAGACCGATGAATCCACGGAAGGCGCCGCAGGTATTGACGGAGAATCAATTGGTAGTCCTGAGGAGAGCGAGTTCATTCAAATGTAGAACAAAGAATCCTTC
ATTCATGGTGACAATGAGGCCTTCCTACATCCAAACAGGAAATTGTCTGAGCTTGCCAAGGATCTTTTCGGAGAGATATATAAAGGAATCGATGGACGTGAAGCTGGAGG
TGGGAGATGGGCGGATTTGGAAAGTGTGGTGCGGGGTGCGGTGGGCGTTTACACGGCGGCGAACGGAGTTGAAAGGCGGTTGGAAGAGATTCGCCGTTGATAATGAGTTG
GAAGAAGGGGATATTTGTGTGTTTGAATTAATTAACAAAACCCCTAAAGTCCATTTCCACGTCACCATTTTCCGTCTTCCAAATCCTCAATGA
Protein sequenceShow/hide protein sequence
MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMKLDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDY
PMRRPPVLIPKSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSP
ESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNEL
EEGDICVFELINKTPKVHFHVTIFRLPNPQ