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IVF0022157 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022157
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent DNA helicase RecQ-like
Genome locationchr04:4891469..4891687
RNA-Seq ExpressionIVF0022157
SyntenyIVF0022157
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041750.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]6.88e-1561.9Show/hide
Query:  NTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQ
        NTSGKGKD+  DEEEIPS RT AAH+M  EE +V+LND+M   Q  VE +A   EVAL  LPQ
Subjt:  NTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQ
KAA0054551.1 reverse transcriptase [Cucumis melo var. makuwa]1.28e-1963.38Show/hide
Query:  MKGV-VTGKNTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLP
        MKGV VT KNTS KGKD+V  E+EIPSPRT AA LMVVEE  V++ D+MG+L+  +ERLA R E AL  +P
Subjt:  MKGV-VTGKNTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLP
TYK27040.1 ATP-dependent DNA helicase RecQ-like [Cucumis melo var. makuwa]6.87e-1561.9Show/hide
Query:  NTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQ
        NTSGKGKD+  DEEEIPS RT AAH+M  EE +V+LND+M   Q  VE +A   EVAL  LPQ
Subjt:  NTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQ
TrEMBL top hitse value%identityAlignment
A0A5A7TEL7 ATP-dependent DNA helicase RecQ-like3.5e-1161.9Show/hide
Query:  NTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQ
        NTSGKGKD+  DEEEIPS RT AAH+M  EE +V+LND+M   Q  VE +A   EVAL  LPQ
Subjt:  NTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQ
A0A5A7ULZ0 Reverse transcriptase2.2e-1363.38Show/hide
Query:  MKGV-VTGKNTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLP
        MKGV VT KNTS KGKD+V  E+EIPSPRT AA LMVVEE  V++ D+MG+L+  +ERLA R E AL  +P
Subjt:  MKGV-VTGKNTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLP
A0A5D3DUQ9 ATP-dependent DNA helicase RecQ-like3.5e-1161.9Show/hide
Query:  NTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQ
        NTSGKGKD+  DEEEIPS RT AAH+M  EE +V+LND+M   Q  VE +A   EVAL  LPQ
Subjt:  NTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGAGTTGTAACCGGCAAGAACACCTCCGGCAAGGGAAAGGATATTGTATTTGATGAAGAGGAGATCCCATCCCCACGCACCTTGGCTGCCCATTTAATGGTAGT
TGAAGAGAAAGTGGTGGACCTCAACGACCAAATGGGAAATCTTCAAACCACCGTGGAACGACTTGCTCTTCGGTTTGAAGTCGCATTGACTACCCTTCCCCAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGAGTTGTAACCGGCAAGAACACCTCCGGCAAGGGAAAGGATATTGTATTTGATGAAGAGGAGATCCCATCCCCACGCACCTTGGCTGCCCATTTAATGGTAGT
TGAAGAGAAAGTGGTGGACCTCAACGACCAAATGGGAAATCTTCAAACCACCGTGGAACGACTTGCTCTTCGGTTTGAAGTCGCATTGACTACCCTTCCCCAAGAGTAA
Protein sequenceShow/hide protein sequence
MKGVVTGKNTSGKGKDIVFDEEEIPSPRTLAAHLMVVEEKVVDLNDQMGNLQTTVERLALRFEVALTTLPQE