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IVF0022178 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022178
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111470974
Genome locationchr12:12325620..12326206
RNA-Seq ExpressionIVF0022178
SyntenyIVF0022178
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035527.1 hypothetical protein E6C27_scaffold285G001930 [Cucumis melo var. makuwa]2.49e-4680.34Show/hide
Query:  MASRILSILVVKVEFGKKDKAKSSK---------------------VVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDN
        MASRILSILVVKVEFGKKDKAKSSK                     VVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDN
Subjt:  MASRILSILVVKVEFGKKDKAKSSK---------------------VVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDN

Query:  LLHSRCLVNGMPCSVVI
        LLHSRCLVNGMP SVV+
Subjt:  LLHSRCLVNGMPCSVVI

KAA0051372.1 uncharacterized protein E6C27_scaffold55G001080 [Cucumis melo var. makuwa]1.54e-4975.89Show/hide
Query:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP
        K+ +VV DGE SE+DELI+E I+ENEEELED SKLTLV RRLLSAQVKE+D+EDQRDNL +SRCLVNGMPCS++IDN SCT   S FLI QLQIPTQHHP
Subjt:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP

Query:  KPYNFQWLNDSG
         PY  QW NDSG
Subjt:  KPYNFQWLNDSG

XP_022158198.1 uncharacterized protein LOC111024735 [Momordica charantia]2.74e-4566.41Show/hide
Query:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP
        K+ +VVTDGE S++DELIEE+++E+EEELEDGS L LVTRRLL+ QVK +D+ DQRDNL H+RCLVNG PCS+VID+ SCT V S FLI +LQIPTQHHP
Subjt:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP

Query:  KPYNFQWLNDSGNNEGSFSSFDFFYLGK
        KPY  QWLNDSG  +    +   F LGK
Subjt:  KPYNFQWLNDSGNNEGSFSSFDFFYLGK

XP_022158256.1 uncharacterized protein LOC111024790 [Momordica charantia]1.96e-4464.84Show/hide
Query:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP
        K+ +VVTDGE S++DELI E+++E+EEELEDGS L LVTRRLL+ QV  +D+ DQRDNL H+RCLVNG PCS+VID+ SCT V S FLI +LQIPTQHHP
Subjt:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP

Query:  KPYNFQWLNDSGNNEGSFSSFDFFYLGK
        KPY  QWLNDSG  +    +   F LGK
Subjt:  KPYNFQWLNDSGNNEGSFSSFDFFYLGK

XP_022929948.1 uncharacterized protein LOC111436410 [Cucurbita moschata]1.74e-4269.64Show/hide
Query:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP
        K+ +VVTD E S+++EL+EEEI+ENEEELEDGS L LVTRRLL  QV END++DQRDNL H+RCLV G PCS+VID+ SCT V S  LI +L  PTQHHP
Subjt:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP

Query:  KPYNFQWLNDSG
        KPY  QWLNDSG
Subjt:  KPYNFQWLNDSG

TrEMBL top hitse value%identityAlignment
A0A5A7T1Q8 Uncharacterized protein6.6e-3680.34Show/hide
Query:  MASRILSILVVKVEFGKKDKAKSSK---------------------VVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDN
        MASRILSILVVKVEFGKKDKAKSSK                     VVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDN
Subjt:  MASRILSILVVKVEFGKKDKAKSSK---------------------VVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDN

Query:  LLHSRCLVNGMPCSVVI
        LLHSRCLVNGMP SVV+
Subjt:  LLHSRCLVNGMPCSVVI

A0A5A7U6D0 Uncharacterized protein1.4e-3875.89Show/hide
Query:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP
        K+ +VV DGE SE+DELI+E I+ENEEELED SKLTLV RRLLSAQVKE+D+EDQRDNL +SRCLVNGMPCS++IDN SCT   S FLI QLQIPTQHHP
Subjt:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP

Query:  KPYNFQWLNDSG
         PY  QW NDSG
Subjt:  KPYNFQWLNDSG

A0A6J1DVF2 uncharacterized protein LOC1110247359.2e-3866.41Show/hide
Query:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP
        K+ +VVTDGE S++DELIEE+++E+EEELEDGS L LVTRRLL+ QVK +D+ DQRDNL H+RCLVNG PCS+VID+ SCT V S FLI +LQIPTQHHP
Subjt:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP

Query:  KPYNFQWLNDSGNNEGSFSSFDFFYLGK
        KPY  QWLNDSG  +    +   F LGK
Subjt:  KPYNFQWLNDSGNNEGSFSSFDFFYLGK

A0A6J1E0F4 uncharacterized protein LOC1110247902.3e-3664.84Show/hide
Query:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP
        K+ +VVTDGE S++DELI E+++E+EEELEDGS L LVTRRLL+ QV  +D+ DQRDNL H+RCLVNG PCS+VID+ SCT V S FLI +LQIPTQHHP
Subjt:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP

Query:  KPYNFQWLNDSGNNEGSFSSFDFFYLGK
        KPY  QWLNDSG  +    +   F LGK
Subjt:  KPYNFQWLNDSGNNEGSFSSFDFFYLGK

A0A6J1ETN1 uncharacterized protein LOC1114364103.3e-3569.64Show/hide
Query:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP
        K+ +VVTD E S+++EL+EEEI+ENEEELEDGS L LVTRRLL  QV END++DQRDNL H+RCLV G PCS+VID+ SCT V S  LI +L  PTQHHP
Subjt:  KSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLIVQLQIPTQHHP

Query:  KPYNFQWLNDSG
        KPY  QWLNDSG
Subjt:  KPYNFQWLNDSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAAGAATACTCAGCATTCTTGTAGTGAAGGTTGAGTTTGGAAAGAAAGATAAAGCTAAGAGCTCCAAAGTTGTCACCGATGGAGAAAACAGTGAGAAAGATGA
GCTAATTGAAGAAGAAATTAAAGAAAATGAGGAAGAACTAGAAGATGGGAGTAAATTGACACTTGTTACAAGAAGGCTTCTTAGTGCTCAAGTTAAGGAAAATGATATGG
AAGATCAAAGAGATAATCTTCTCCACTCAAGGTGTTTAGTTAATGGGATGCCTTGTAGTGTTGTAATAGATAATGAAAGTTGTACGAAAGTTTTTAGTATATTTCTTATC
GTACAATTGCAAATTCCAACTCAACATCATCCTAAGCCTTACAACTTTCAATGGCTCAATGATAGTGGAAACAATGAAGGTAGTTTCTCAAGCTTTGATTTCTTTTACCT
TGGAAAAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAAGAATACTCAGCATTCTTGTAGTGAAGGTTGAGTTTGGAAAGAAAGATAAAGCTAAGAGCTCCAAAGTTGTCACCGATGGAGAAAACAGTGAGAAAGATGA
GCTAATTGAAGAAGAAATTAAAGAAAATGAGGAAGAACTAGAAGATGGGAGTAAATTGACACTTGTTACAAGAAGGCTTCTTAGTGCTCAAGTTAAGGAAAATGATATGG
AAGATCAAAGAGATAATCTTCTCCACTCAAGGTGTTTAGTTAATGGGATGCCTTGTAGTGTTGTAATAGATAATGAAAGTTGTACGAAAGTTTTTAGTATATTTCTTATC
GTACAATTGCAAATTCCAACTCAACATCATCCTAAGCCTTACAACTTTCAATGGCTCAATGATAGTGGAAACAATGAAGGTAGTTTCTCAAGCTTTGATTTCTTTTACCT
TGGAAAAGTATAA
Protein sequenceShow/hide protein sequence
MASRILSILVVKVEFGKKDKAKSSKVVTDGENSEKDELIEEEIKENEEELEDGSKLTLVTRRLLSAQVKENDMEDQRDNLLHSRCLVNGMPCSVVIDNESCTKVFSIFLI
VQLQIPTQHHPKPYNFQWLNDSGNNEGSFSSFDFFYLGKV