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IVF0022215 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0022215
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr09:13188273..13188497
RNA-Seq ExpressionIVF0022215
SyntenyIVF0022215
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009536 - plastid (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABR13326.1 putative ATP-dependent protease proteolytic subunit, partial [Prunus dulcis]8.96e-1962.16Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +EDDTK LYLFINSP G VI GVA                    ASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ

PHT61819.1 ATP-dependent Clp protease proteolytic subunit [Capsicum annuum]1.35e-1860.81Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +ED+TK LYLFINSP G VI GVA                    ASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ

prf||1211235BE ORF 74B [Nicotiana tabacum]1.35e-1860.81Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +ED+TK LYLFINSP G VI GVA                    ASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ

WP_201356312.1 ATP-dependent Clp protease proteolytic subunit, partial [Salmonella enterica]9.22e-1960.81Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ
        M+YL +EDDTK LYLFINSP G VI GVA                    ASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ

YP_009772885.1 ATP-dependent Clp protease proteolytic subunit [Avicennia marina]1.23e-1862.16Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +EDDTK LYLFINSP G VI GVA                    ASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGVA--------------------ASMRSFILVGGEITKRLAIPHAWRQ

TrEMBL top hitse value%identityAlignment
A0A346TMV2 ATP-dependent Clp protease proteolytic subunit1.8e-1262.16Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +EDDTK LYLFINSP G VI GV                    AASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ

A0A6B9IM02 ATP-dependent Clp protease proteolytic subunit1.8e-1262.16Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +EDDTK LYLFINSP G VI GV                    AASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ

A0A6H1PCS8 ATP-dependent Clp protease proteolytic subunit1.8e-1262.16Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +EDDTK LYLFINSP G VI GV                    AASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ

A0A7M3US92 ATP-dependent Clp protease proteolytic subunit1.8e-1262.16Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +EDDTK LYLFINSP G VI GV                    AASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ

A7Y7Q2 ATP-dependent Clp protease proteolytic subunit (Fragment)1.8e-1262.16Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ
        MVYL +EDDTK LYLFINSP G VI GV                    AASM SFILVGGEITKRLA PHAWRQ
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAWRQ

SwissProt top hitse value%identityAlignment
A0A360 ATP-dependent Clp protease proteolytic subunit1.8e-1259.15Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHA
        M+YL +EDDTK LYLFINSP G VI GV                    AASM SFILVGGEITKRLA PHA
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHA

A6MM61 ATP-dependent Clp protease proteolytic subunit3.0e-1257.75Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHA
        MVYL +EDDTK LYLFINSP G VI G+                    AASM SF+LVGGEITKRLA PHA
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHA

Q06GN5 ATP-dependent Clp protease proteolytic subunit1.3e-1256.94Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAW
        MVYL +ED T+ LYLFINSP G VI G+                    AASM SFILVGGEITKRLA PHAW
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHAW

Q332V2 ATP-dependent Clp protease proteolytic subunit1.8e-1259.15Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHA
        M+YL +EDDTK LYLFINSP G VI GV                    AASM SFILVGGEITKRLA PHA
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHA

Q9M3K5 ATP-dependent Clp protease proteolytic subunit1.3e-1260.56Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHA
        MVYL +EDDTK LYLFINSP G VI GV                    AASM SFILVGGEITKRLA PHA
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIAGV--------------------AASMRSFILVGGEITKRLAIPHA

Arabidopsis top hitse value%identityAlignment
ATCG00670.1 plastid-encoded CLP P2.0e-1152.11Show/hide
Query:  MVYLGMEDDTKILYLFINSPCGEVIA--------------------GVAASMRSFILVGGEITKRLAIPHA
        M+YL +E DTK LYLFINSP G VI+                    G+AAS+ SFILVGG ITKR+A PHA
Subjt:  MVYLGMEDDTKILYLFINSPCGEVIA--------------------GVAASMRSFILVGGEITKRLAIPHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATATCTCGGTATGGAGGATGATACCAAAATTCTATATTTATTTATAAACTCTCCTTGTGGAGAGGTAATAGCTGGAGTAGCTGCTTCAATGAGATCTTTTATTCT
AGTCGGAGGAGAAATTACCAAACGTCTAGCAATCCCTCACGCTTGGCGCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATATCTCGGTATGGAGGATGATACCAAAATTCTATATTTATTTATAAACTCTCCTTGTGGAGAGGTAATAGCTGGAGTAGCTGCTTCAATGAGATCTTTTATTCT
AGTCGGAGGAGAAATTACCAAACGTCTAGCAATCCCTCACGCTTGGCGCCAATGA
Protein sequenceShow/hide protein sequence
MVYLGMEDDTKILYLFINSPCGEVIAGVAASMRSFILVGGEITKRLAIPHAWRQ